PDB: 20505 件ウェブページステータス検索Chemie searchBIRD

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4XID	AntpHD with 15bp DNA duplex 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*AP*GP*AP*AP*AP*GP*CP*CP*AP*TP*TP*AP*GP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*CP*TP*AP*AP*TP*GP*GP*CP*TP*TP*TP*C)-3'), ... 著者 White, M.A, Zandarashvili, L, Iwahara, J. 登録日 2015-01-06 公開日 2015-11-25 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.701 Å) 主引用文献 Entropic Enhancement of Protein-DNA Affinity by Oxygen-to-Sulfur Substitution in DNA Phosphate. Biophys.J., 109, 2015
8PH4	Co-Crystal structure of the SARS-CoV2 main protease Nsp5 with an Uracil-carrying X77-like inhibitor 分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, MALONATE ION, ... 著者 Barthel, T, Altincekic, N, Jores, N, Wollenhaupt, J, Weiss, M.S, Schwalbe, H. 登録日 2023-06-18 公開日 2024-01-31 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Targeting the Main Protease (M pro , nsp5) by Growth of Fragment Scaffolds Exploiting Structure-Based Methodologies. Acs Chem.Biol., 19, 2024
6R5J	New MAX Effector from Magnaporthe oryzae 分子名称: HEXAETHYLENE GLYCOL, Uncharacterized protein 著者 Hoh, F, Padilla, A, De Guillen, K. 登録日 2019-03-25 公開日 2020-05-06 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 New MAX Effector from Magnaporthe oryzae To Be Published
6L10	PHF20L1 Tudor1 - MES 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PHD finger protein 20-like protein 1, SULFATE ION 著者 Lv, M.Q, Gao, J. 登録日 2019-09-27 公開日 2020-09-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Conformational Selection in Ligand Recognition by the First Tudor Domain of PHF20L1. J Phys Chem Lett, 11, 2020
6L1F	Crystal structure of PHF20L1 Tudor1 in complex with K142me1 DNMT1 分子名称: PHD finger protein 20-like protein 1, the K142me1 DNMT1 peptide 著者 Lv, M.Q, Gao, J. 登録日 2019-09-29 公開日 2020-09-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Conformational Selection in Ligand Recognition by the First Tudor Domain of PHF20L1. J Phys Chem Lett, 11, 2020
6RM9	Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP 分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ... 著者 Hamann, F, Neumann, P, Ficner, R. 登録日 2019-05-06 公開日 2020-02-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2. Proc.Natl.Acad.Sci.USA, 117, 2020
6RMB	Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative mRNA splicing factor, ... 著者 Hamann, F, Neumann, P, Ficner, R. 登録日 2019-05-06 公開日 2020-02-05 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2. Proc.Natl.Acad.Sci.USA, 117, 2020
5CRO	REFINED STRUCTURE OF CRO REPRESSOR PROTEIN FROM BACTERIOPHAGE LAMBDA 分子名称: CRO REPRESSOR PROTEIN, PHOSPHATE ION 著者 Ohlendorf, D.H, Tronrud, D.E, Matthews, B.W. 登録日 1998-04-17 公開日 1998-06-17 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Refined structure of Cro repressor protein from bacteriophage lambda suggests both flexibility and plasticity. J.Mol.Biol., 280, 1998
8IGD	The crystal structure of the minimal interaction domains of DRB7.2:DRB4 complex 分子名称: Double-stranded RNA-binding domain (DsRBD)-containing protein, Double-stranded RNA-binding protein 4 著者 Paturi, S, Deshmukh, M.V. 登録日 2023-02-20 公開日 2024-06-26 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The mechanism of the DRB7.2:DRB4 mediated endogenous inverted-repeat dsRNA (endo-IR dsRNA) sequestering in plants To Be Published
8PHL	Human carbonic anhydrase II containing 4-fluorophenylalanine 分子名称: Carbonic anhydrase 2, MERCURIBENZOIC ACID, ZINC ION 著者 Pham, L.B.T, Costantino, A, Barbieri, L, Calderone, V, Luchinat, E, Banci, L. 登録日 2023-06-20 公開日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Controlling the incorporation of fluorinated amino acids in human cells and its structural impact. Protein Sci., 33, 2024
3T7C	Crystal structure of carveol dehydrogenase from Mycobacterium avium bound to NAD 分子名称: Carveol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2011-07-29 公開日 2011-08-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors. Sci Rep, 7, 2017
5GHL	Crystal structure Analysis of the starch-binding domain of glucoamylase from Aspergillus niger 分子名称: GLYCEROL, Glucoamylase, SULFATE ION 著者 Miyake, H, Suyama, Y, Muraki, N, Kusunoki, M, Tanaka, A. 登録日 2016-06-20 公開日 2017-10-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of the starch-binding domain of glucoamylase from Aspergillus niger. Acta Crystallogr.,Sect.F, 73, 2017
5EJ2	Crystal structure of Carveol dehydrogenase from Mycobacterium avium in complex with NAD 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Carveol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2015-10-31 公開日 2015-12-02 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors. Sci Rep, 7, 2017
3S55	Crystal structure of a putative short-chain dehydrogenase/reductase from Mycobacterium abscessus bound to NAD 分子名称: CALCIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative short-chain dehydrogenase/reductase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2011-05-20 公開日 2011-06-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors. Sci Rep, 7, 2017
3TSC	Crystal structure of short chain dehydrogenase MAP_2410 from Mycobacterium paratuberculosis bound to NAD 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative oxidoreductase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2011-09-12 公開日 2011-10-05 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors. Sci Rep, 7, 2017
3SX2	Crystal structure of a putative 3-ketoacyl-(acyl-carrier-protein) reductase from Mycobacterium paratuberculosis in complex with NAD 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative 3-ketoacyl-(acyl-carrier-protein) reductase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2011-07-14 公開日 2011-08-03 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors. Sci Rep, 7, 2017
4V5L	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog 分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Voorhees, R.M, Schmeing, T.M, Ramakrishnan, V. 登録日 2010-09-02 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The Mechanism for Activation of GTP Hydrolysis on the Ribosome. Science, 330, 2010
6DKQ	Crystal structure of the Shr Hemoglobin Interacting Domain 2 分子名称: Heme-binding protein Shr, SULFATE ION 著者 Macdonald, R, Cascio, D, Collazo, M.J, Clubb, R.T. 登録日 2018-05-30 公開日 2018-10-24 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The Streptococcus pyogenes Shr protein captures human hemoglobin using two structurally unique binding domains. J.Biol.Chem., 293, 2018
6DZ8	Crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (S75C) 分子名称: Penicillin-binding protein 4, ZINC ION 著者 Alexander, J.A.N, Strynadka, N.C.J. 登録日 2018-07-03 公開日 2018-12-19 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Recognition of Peptidoglycan Fragments by the Transpeptidase PBP4 FromStaphylococcus aureus. Front Microbiol, 9, 2018
6EGS	Crystal structure of the GalNAc-T2 F104S mutant in complex with UDP-GalNAc 分子名称: MANGANESE (II) ION, Polypeptide N-acetylgalactosaminyltransferase 2, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE 著者 de las Rivas, M, Coelho, H, Diniz, A, Lira-Navarrete, E, Jimenez-Barbero, J, Schjoldager, K.T, Bennett, E.P, Vakhrushev, S.Y, Clausen, H, Corzana, F, Marcelo, F, Hurtado-Guerrero, R. 登録日 2017-09-12 公開日 2018-04-11 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural Analysis of a GalNAc-T2 Mutant Reveals an Induced-Fit Catalytic Mechanism for GalNAc-Ts. Chemistry, 24, 2018
6EJX	The metal ion-dependent adhesion site (MIDAS) of the alphaMbeta2 integrin Mac-1 I-domain promiscuously and competitively binds multiple ligands in the regulation of Leukocyte function 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Emsley, J, Saleem, M. 登録日 2017-09-24 公開日 2018-10-24 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis of the leukocyte integrin Mac-1 I-domain interactions with the platelet glycoprotein Ib. Blood Adv, 3, 2019
3OEC	Crystal structure of carveol dehydrogenase from Mycobacterium thermoresistibile 分子名称: Carveol dehydrogenase (MythA.01326.c, A0R518 homolog), SODIUM ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2010-08-12 公開日 2010-09-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors. Sci Rep, 7, 2017
3PGX	Crystal structure of a putative carveol dehydrogenase from Mycobacterium paratuberculosis bound to nicotinamide adenine dinucleotide 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, carveol dehydrogenase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2010-11-02 公開日 2010-11-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors. Sci Rep, 7, 2017
3PXX	Crystal structure of carveol dehydrogenase from Mycobacterium avium bound to nicotinamide adenine dinucleotide 分子名称: Carveol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2010-12-10 公開日 2010-12-29 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Mycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors. Sci Rep, 7, 2017
4KZ3	Crystal structure of AmpC beta-lactamase in complex with fragment 44 (5-chloro-3-sulfamoylthiophene-2-carboxylic acid) 分子名称: 5-chloro-3-sulfamoylthiophene-2-carboxylic acid, Beta-lactamase, PHOSPHATE ION 著者 Eidam, O, Barelier, S, Fish, I, Shoichet, B.K. 登録日 2013-05-29 公開日 2014-05-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Increasing chemical space coverage by combining empirical and computational fragment screens. Acs Chem.Biol., 9, 2014

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