PDB: 217686 件ウェブページステータス検索Chemie searchBIRD

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6LQ6	Crystal Structure of E447A Acyl-CoA Dehydrogenase FadE5 mutant from Mycobacteria smegmatis in complex with C20CoA 分子名称: Acyl-CoA dehydrogenase, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Liu, X, Chen, X.B. 登録日 2020-01-13 公開日 2020-07-01 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis for the broad substrate specificity of two acyl-CoA dehydrogenases FadE5 from mycobacteria. Proc.Natl.Acad.Sci.USA, 117, 2020
6LQ5	Crystal Structure of E447A Acyl-CoA Dehydrogenase FadE5 mutant from Mycobacteria smegmatis in complex with C16CoA 分子名称: Acyl-CoA dehydrogenase, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Liu, X, Chen, X.B. 登録日 2020-01-13 公開日 2020-07-01 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for the broad substrate specificity of two acyl-CoA dehydrogenases FadE5 from mycobacteria. Proc.Natl.Acad.Sci.USA, 117, 2020
7JPD	Crystal structure of the trimeric full length mature hemagglutinin from influenza A virus A/Fort Monmouth/1/1947 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2020-08-07 公開日 2021-10-06 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structural characterisation of hemagglutinin from seven Influenza A H1N1 strains reveal diversity in the C05 antibody recognition site. Sci Rep, 13, 2023
5L0Q	Crystal structure of the complex between ADAM10 D+C domain and a conformation specific mAb 8C7. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Disintegrin and metalloproteinase domain-containing protein 10, MAGNESIUM ION, ... 著者 Xu, K, Saha, N, Nikolov, D.B. 登録日 2016-07-28 公開日 2016-11-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.759 Å) 主引用文献 An activated form of ADAM10 is tumor selective and regulates cancer stem-like cells and tumor growth. J.Exp.Med., 213, 2016
5L9D	AFAMIN ANTIBODY FRAGMENT, N14 FAB, L1- GLYCOSYLATED, CRYSTAL FORM I, parsimonious model 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, ... 著者 Rupp, B, Naschberger, A. 登録日 2016-06-10 公開日 2016-08-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling. Acta Crystallogr D Struct Biol, 72, 2016
2RTI	STREPTAVIDIN-GLYCOLURIL COMPLEX, PH 2.50, SPACE GROUP I222 分子名称: FORMIC ACID, GLYCOLURIL, STREPTAVIDIN 著者 Katz, B.A. 登録日 1997-09-11 公開日 1998-10-14 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH. J.Mol.Biol., 274, 1997
6U5A	Crystal structure of Equine Serum Albumin complex with 6-MNA 分子名称: (6-methoxynaphthalen-2-yl)acetic acid, SULFATE ION, Serum albumin, ... 著者 Czub, M.P, Handing, K.B, Venkataramany, B.S, Cymborowski, M.T, Shabalin, I.G, Satchell, K.J, Joachimiak, A, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2019-08-27 公開日 2019-09-04 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Albumin-Based Transport of Nonsteroidal Anti-Inflammatory Drugs in Mammalian Blood Plasma. J.Med.Chem., 63, 2020
5KPF	Crystal structure of cytochrome c - Phenyl-trisulfonatocalix[4]arene complex 分子名称: Cytochrome c iso-1, HEME C, NITRATE ION, ... 著者 Doolan, A.M, Rennie, M.L, Crowley, P.B. 登録日 2016-07-04 公開日 2017-07-12 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.698 Å) 主引用文献 Protein Recognition by Functionalized Sulfonatocalix[4]arenes. Chemistry, 24, 2018
6LQ4	Crystal Structure of E447A Acyl-CoA Dehydrogenase FadE5 mutant from Mycobacteria smegmatis in complex with C14CoA 分子名称: Acyl-CoA dehydrogenase, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Liu, X, Chen, X.B. 登録日 2020-01-13 公開日 2020-07-01 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural basis for the broad substrate specificity of two acyl-CoA dehydrogenases FadE5 from mycobacteria. Proc.Natl.Acad.Sci.USA, 117, 2020
6LQ1	Crystal Structure of E447A Acyl-CoA Dehydrogenase FadE5 mutant from Mycobacteria smegmatis in complex with C8CoA 分子名称: Acyl-CoA dehydrogenase, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Liu, X, Chen, X.B. 登録日 2020-01-12 公開日 2020-07-01 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis for the broad substrate specificity of two acyl-CoA dehydrogenases FadE5 from mycobacteria. Proc.Natl.Acad.Sci.USA, 117, 2020
8F35	Apo ELIC in spMSP1D1 nanodiscs with 2:1:1 POPC:POPE:POPG 分子名称: Erwinia chrysanthemi ligand-gated ion channel 著者 Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L. 登録日 2022-11-09 公開日 2023-11-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.17 Å) 主引用文献 Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel. Nat Commun, 15, 2024
8SDJ	Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM20 Coiled-Coil Domain 分子名称: Pyrin 著者 Lou, X.H, Ma, B.B, Zhuang, Y, Li, X.C. 登録日 2023-04-06 公開日 2024-04-24 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM20 Coiled-Coil Domain To Be Published
8F34	ELIC with Propylamine in spMSP1D1 nanodiscs with 2:1:1 POPC:POPE:POPG 分子名称: 3-AMINOPROPANE, Erwinia chrysanthemi ligand-gated ion channel 著者 Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L. 登録日 2022-11-09 公開日 2023-11-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.12 Å) 主引用文献 Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel. Nat Commun, 15, 2024
8F33	ELIC with Propylamine in saposin nanodiscs with 2:1:1 POPC:POPE:POPG 分子名称: 3-AMINOPROPANE, Erwinia chrysanthemi ligand-gated ion channel 著者 Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L. 登録日 2022-11-09 公開日 2023-11-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel. Nat Commun, 15, 2024
6UQJ	Crystal structure of the GH39 enzyme from Xanthomonas axonopodis pv. citri 分子名称: Beta-xylosidase 著者 Morais, M.A.B, Polo, C.C, Santos, C.R, Murakami, M.T. 登録日 2019-10-20 公開日 2020-07-22 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.707 Å) 主引用文献 Exploring the Molecular Basis for Substrate Affinity and Structural Stability in Bacterial GH39 beta-Xylosidases. Front Bioeng Biotechnol, 8, 2020
8F32	ELIC with Propylamine in SMA nanodiscs with 2:1:1 POPC:POPE:POPG 分子名称: 3-AMINOPROPANE, Erwinia chrysanthemi ligand-gated ion channel 著者 Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L. 登録日 2022-11-09 公開日 2023-11-15 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.71 Å) 主引用文献 Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel. Nat Commun, 15, 2024
6M9K	Crystal structure of lambda exonuclease in complex with the Red beta C-terminal domain 分子名称: Exonuclease, Recombination protein bet, SULFATE ION 著者 Bell, C.E, Caldwell, B.J. 登録日 2018-08-23 公開日 2019-01-02 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the Red beta C-terminal domain in complex with lambda Exonuclease reveals an unexpected homology with lambda Orf and an interaction with Escherichia coli single stranded DNA binding protein. Nucleic Acids Res., 47, 2019
8DIC	Virtual screening for novel SARS-CoV-2 main protease non-covalent and covalent inhibitors 分子名称: 3C-like proteinase nsp5, 5-bromo-3-[(3-bromo-4-chlorophenyl)methoxy]pyridine-2-carbaldehyde 著者 Singh, I, Shoichet, B.K. 登録日 2022-06-29 公開日 2023-06-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Large library docking for novel SARS-CoV-2 main protease non-covalent and covalent inhibitors. Protein Sci., 32, 2023
8DIF	Virtual screening for novel SARS-CoV-2 main protease non-covalent and covalent inhibitors 分子名称: 3C-like proteinase nsp5, 5-bromo-3-[(naphthalen-2-yl)methoxy]pyridine-2-carbaldehyde 著者 Singh, I, Shoichet, B.K. 登録日 2022-06-29 公開日 2023-06-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Large library docking for novel SARS-CoV-2 main protease non-covalent and covalent inhibitors. Protein Sci., 32, 2023
8DIG	Virtual screening for novel SARS-CoV-2 main protease non-covalent and covalent inhibitors 分子名称: (3P)-1-[(4-fluorophenyl)methyl]-3-(isoquinolin-4-yl)imidazolidine-2,4-dione, 3C-like proteinase nsp5 著者 Singh, I, Shoichet, B.K. 登録日 2022-06-29 公開日 2023-06-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Large library docking for novel SARS-CoV-2 main protease non-covalent and covalent inhibitors. Protein Sci., 32, 2023
7SMV	Crystallization of feline coronavirus Mpro with GC376 reveals mechanism of inhibition 分子名称: 3C-like proteinase, N~2~-[(benzyloxy)carbonyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide 著者 Khan, M.B, Lu, J, Young, H.S, Lemieux, M.J. 登録日 2021-10-26 公開日 2022-04-06 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Crystallization of Feline Coronavirus M pro With GC376 Reveals Mechanism of Inhibition. Front Chem, 10, 2022
8DIE	Virtual screening for novel SARS-CoV-2 main protease non-covalent and covalent inhibitors 分子名称: 3C-like proteinase nsp5, 5-bromo-3-[(4-methyl-3-nitrophenyl)methoxy]pyridine-2-carbaldehyde 著者 Singh, I, Shoichet, B.K. 登録日 2022-06-29 公開日 2023-06-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Large library docking for novel SARS-CoV-2 main protease non-covalent and covalent inhibitors. Protein Sci., 32, 2023
8F65	Crystal structure of VACV D13 in complex with BBL030900 分子名称: 8-methoxyquinolin-4-amine, FORMIC ACID, Scaffold protein D13 著者 Subedi, B.P, Garriga, D, Coulibaly, F. 登録日 2022-11-16 公開日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structure of scaffolidng protein D13 of Vaccinia Virus in complex with fragments inhibiting A17 binding. To Be Published
8CT4	Cryo-EM structure of Mtb Lpd bound to inhibitor complex with 2-((2-cyano-N,5-dimethyl-1H-indole)-7-sulfonamido)-N-(4-(oxetan-3-yl)-3,4-dihydro-2H-benzo[b] [1,4]oxazin-7-yl)acetamide 分子名称: Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, N~2~-(2-cyano-5-methyl-1H-indole-7-sulfonyl)-N~2~-methyl-N-[4-(oxetan-3-yl)-3,4-dihydro-2H-1,4-benzoxazin-7-yl]glycinamide 著者 Kochanczyk, T, Arango, N, Lima, C.D. 登録日 2022-05-13 公開日 2022-05-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.17 Å) 主引用文献 Cryo-EM structure of Mtb Lpd bound to the inhibitor 2-((2-cyano-N,5-dimethyl-1H-indole)-7-sulfonamido)-N-(4-(oxetan-3-yl)-3,4-dihydro-2H-benzo[b] [1,4]oxazin-7-yl)acetamide at 2.17 Angstrom resolution Not published
6V6G	Crystal structure of CTX-M-14 E166A/P167S/D240G beta-lactamase 分子名称: Beta-lactamase, DI(HYDROXYETHYL)ETHER, SODIUM ION 著者 Brown, C.A, Hu, L, Sankaran, B, Prasad, B.V.V, Palzkill, T.G. 登録日 2019-12-05 公開日 2020-04-22 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Antagonism between substitutions in beta-lactamase explains a path not taken in the evolution of bacterial drug resistance. J.Biol.Chem., 295, 2020

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