Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WFK
DownloadVisualize
BU of 5wfk by Molmil
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fislage, M, Frank, J.
登録日2017-07-12
公開日2018-05-02
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A.
Nucleic Acids Res., 46, 2018
5WJY
DownloadVisualize
BU of 5wjy by Molmil
Cryo-EM structure of B. subtilis flagellar filaments S285P
分子名称: Flagellin
著者Wang, F, Burrage, A.M, Kearns, D.B, Egelman, E.H.
登録日2017-07-24
公開日2017-10-25
最終更新日2020-01-01
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献A structural model of flagellar filament switching across multiple bacterial species.
Nat Commun, 8, 2017
6MK4
DownloadVisualize
BU of 6mk4 by Molmil
Solution NMR structure of spider toxin analogue [E17K]ProTx-II
分子名称: Beta/omega-theraphotoxin-Tp2a
著者Schroeder, C.I.
登録日2018-09-25
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Peptide-Membrane Interactions Affect the Inhibitory Potency and Selectivity of Spider Toxins ProTx-II and GpTx-1.
ACS Chem. Biol., 14, 2019
4R7Z
DownloadVisualize
BU of 4r7z by Molmil
PfMCM-AAA double-octamer
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 21, MAGNESIUM ION
著者Miller, J.M, Arachea, B.T, Epling, L.B, Enemark, E.J.
登録日2014-08-28
公開日2014-10-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Analysis of the crystal structure of an active MCM hexamer.
Elife, 3, 2014
5K6P
DownloadVisualize
BU of 5k6p by Molmil
The NMR structure of the m domain tri-helix bundle and C2 of human cardiac Myosin Binding Protein C
分子名称: Myosin-binding protein C, cardiac-type
著者Michie, K.A, Kwan, A.H, Tung, C.S, Guss, J.M, Trewhella, J.
登録日2016-05-25
公開日2016-11-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Highly Conserved Yet Flexible Linker Is Part of a Polymorphic Protein-Binding Domain in Myosin-Binding Protein C.
Structure, 24, 2016
6MK5
DownloadVisualize
BU of 6mk5 by Molmil
Solution NMR structure of spider toxin analogue [F5A,M6F,T26L,K28R]GpTx-1
分子名称: Toxin GTx1-15
著者Schroeder, C.I.
登録日2018-09-25
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Peptide-Membrane Interactions Affect the Inhibitory Potency and Selectivity of Spider Toxins ProTx-II and GpTx-1.
ACS Chem. Biol., 14, 2019
4TF4
DownloadVisualize
BU of 4tf4 by Molmil
ENDO/EXOCELLULASE:CELLOPENTAOSE FROM THERMOMONOSPORA
分子名称: CALCIUM ION, T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMAIN AND CELLULOSE-BINDING DOMAIN, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
著者Sakon, J, Wilson, D.B, Karplus, P.A.
登録日1997-05-31
公開日1997-09-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca.
Nat.Struct.Biol., 4, 1997
4TSS
DownloadVisualize
BU of 4tss by Molmil
TOXIC SHOCK SYNDROME TOXIN-1: TETRAGONAL P4(1)2(1)2 CRYSTAL FORM
分子名称: TOXIC SHOCK SYNDROME TOXIN-1, ZINC ION
著者Prasad, G.S, Radhakrishnan, R, Mitchell, D.T, Earhart, C.A, Dinges, M.M, Cook, W.J, Schlivert, P.M, Ohlendorf, D.H.
登録日1996-12-11
公開日1997-12-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Refined structures of three crystal forms of toxic shock syndrome toxin-1 and of a tetramutant with reduced activity.
Protein Sci., 6, 1997
4DXW
DownloadVisualize
BU of 4dxw by Molmil
Crystal structure of NavRh, a voltage-gated sodium channel
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Ion transport protein, ...
著者Zhang, X, Ren, W.L, Yan, C.Y, Wang, J.W, Yan, N.
登録日2012-02-28
公開日2012-05-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.052 Å)
主引用文献Crystal structure of an orthologue of the NaChBac voltage-gated sodium channel
Nature, 486, 2012
6AGF
DownloadVisualize
BU of 6agf by Molmil
Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta1
分子名称: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pan, X.J, li, Z.Q, Zhou, Q, Shen, H.Z, Wu, K, Huang, X.S, Chen, J.F, Zhang, J.R, Zhu, X.C, Lei, J.L, Xiong, W, Gong, H.P, Xiao, B.L, Yan, N.
登録日2018-08-11
公開日2018-10-10
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta 1.
Science, 362, 2018
6LGN
DownloadVisualize
BU of 6lgn by Molmil
The atomic structure of varicella zoster virus C-capsid
分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
著者Li, S, Zheng, Q.
登録日2019-12-05
公開日2020-07-29
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献Near-atomic cryo-electron microscopy structures of varicella-zoster virus capsids.
Nat Microbiol, 5, 2020
6L3X
DownloadVisualize
BU of 6l3x by Molmil
Discovery of novel peptidomimetic boronate ClpP inhibitors with noncanonical enzyme mechanism as potent virulence blockers in vitro and in vivo
分子名称: ATP-dependent Clp protease proteolytic subunit, [(1~{R})-1-[[(2~{S})-2-[[2,5-bis(chloranyl)phenyl]carbonylamino]-3-(1~{H}-indol-3-yl)propanoyl]amino]-3-methyl-butyl]boronic acid
著者Luo, Y.F, Bao, R, Ju, Y, He, L.H.
登録日2019-10-15
公開日2020-08-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3054 Å)
主引用文献Discovery of Novel Peptidomimetic Boronate ClpP Inhibitors with Noncanonical Enzyme Mechanism as Potent Virulence Blockersin Vitroandin Vivo.
J.Med.Chem., 63, 2020
4UOR
DownloadVisualize
BU of 4uor by Molmil
Structure of lipoteichoic acid synthase LtaS from Listeria monocytogenes in complex with glycerol phosphate
分子名称: (2R)-2,3-dihydroxypropyl phosphate, LIPOTEICHOIC ACID SYNTHASE, MAGNESIUM ION
著者Campeotto, I, Freemont, P, Grundling, A.
登録日2014-06-09
公開日2014-08-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.194 Å)
主引用文献Structural and mechanistic insight into the Listeria monocytogenes two-enzyme lipoteichoic acid synthesis system.
J. Biol. Chem., 289, 2014
6LAH
DownloadVisualize
BU of 6lah by Molmil
Crystal structure of rhesus macaque MHC class I molecule Mamu-B*098 complexed with lysophosphatidylcholine
分子名称: (2R)-2,3-dihydroxypropyl hexadecanoate, 1,2-ETHANEDIOL, Beta-2-microglobulin, ...
著者Shima, Y, Morita, D.
登録日2019-11-12
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structures of lysophospholipid-bound MHC class I molecules.
J.Biol.Chem., 295, 2020
6LAM
DownloadVisualize
BU of 6lam by Molmil
Crystal structure of rhesus macaque MHC class I molecule Mamu-B*098 complexed with lysophosphatidylethanolamine
分子名称: (2R)-2,3-dihydroxypropyl hexadecanoate, 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Shima, Y, Morita, D.
登録日2019-11-12
公開日2020-04-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of lysophospholipid-bound MHC class I molecules.
J.Biol.Chem., 295, 2020
6LGL
DownloadVisualize
BU of 6lgl by Molmil
The atomic structure of varicella-zoster virus A-capsid
分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
著者Zheng, Q, Li, S.
登録日2019-12-05
公開日2020-07-29
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Near-atomic cryo-electron microscopy structures of varicella-zoster virus capsids.
Nat Microbiol, 5, 2020
6L8S
DownloadVisualize
BU of 6l8s by Molmil
High resolution crystal structure of crustacean hemocyanin.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Masuda, T, Mikami, B, Baba, S.
登録日2019-11-07
公開日2020-05-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献The high-resolution crystal structure of lobster hemocyanin shows its enzymatic capability as a phenoloxidase.
Arch.Biochem.Biophys., 688, 2020
6L7P
DownloadVisualize
BU of 6l7p by Molmil
cryo-EM structure of cyanobacteria NDH-1LdelV complex
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BETA-CAROTENE, ...
著者Zhang, C, Shuai, J, Wu, J, Lei, M.
登録日2019-11-02
公開日2020-02-19
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural insights into NDH-1 mediated cyclic electron transfer.
Nat Commun, 11, 2020
6LA9
DownloadVisualize
BU of 6la9 by Molmil
349 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0 (high cryoprotectant)
分子名称: CALCIUM ION, DNA (349-MER), Histone H1.0, ...
著者Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
登録日2019-11-12
公開日2020-10-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, 2020
6L9Z
DownloadVisualize
BU of 6l9z by Molmil
338 bp di-nucleosome assembled with linker histone H1.X
分子名称: CALCIUM ION, CHLORIDE ION, DNA (338-MER), ...
著者Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
登録日2019-11-11
公開日2021-02-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021
6L35
DownloadVisualize
BU of 6l35 by Molmil
PSI-LHCI Supercomplex from Physcometrella patens
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Zhao, L, Yan, Q.J, Qin, X.C.
登録日2019-10-09
公開日2021-02-10
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Antenna arrangement and energy-transfer pathways of PSI-LHCI from the moss Physcomitrella patens.
Cell Discov, 7, 2021
6LAB
DownloadVisualize
BU of 6lab by Molmil
169 bp nucleosome, harboring cohesive DNA termini, assembled with linker histone H1.0
分子名称: CALCIUM ION, CHLORIDE ION, DNA (169-MER), ...
著者Adhireksan, Z, Sharma, D, Bao, Q, Lee, P.L, Padavattan, S, Davey, C.A.
登録日2019-11-12
公開日2021-02-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021
6LER
DownloadVisualize
BU of 6ler by Molmil
169 bp nucleosome harboring non-identical cohesive DNA termini.
分子名称: CALCIUM ION, DNA (169-MER), Histone H2A type 1-B/E, ...
著者Sharma, D, Adhireksan, Z, Lee, P.L, Davey, C.A.
登録日2019-11-26
公開日2021-03-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021
8FAB
DownloadVisualize
BU of 8fab by Molmil
CRYSTAL STRUCTURE OF THE FAB FRAGMENT FROM THE HUMAN MYELOMA IMMUNOGLOBULIN IGG HIL AT 1.8 ANGSTROMS RESOLUTION
分子名称: IGG1-LAMBDA HIL FAB (HEAVY CHAIN), IGG1-LAMBDA HIL FAB (LIGHT CHAIN)
著者Saul, F.A, Poljak, R.J.
登録日1992-03-23
公開日1993-10-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Three-dimensional structure of murine anti-p-azophenylarsonate Fab 36-71. 1. X-ray crystallography, site-directed mutagenesis, and modeling of the complex with hapten.
Biochemistry, 30, 1991
6LKN
DownloadVisualize
BU of 6lkn by Molmil
Crystal structure of ATP11C-CDC50A in PtdSer-bound E2P state
分子名称: 1-deoxy-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, ...
著者Abe, K, Irie, K, Nakanishi, H, Hasegawa, K.
登録日2019-12-19
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Crystal structure of a human plasma membrane phospholipid flippase.
J.Biol.Chem., 295, 2020

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon