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3DIP
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BU of 3dip by Molmil
Crystal structure of an enolase protein from the environmental genome shotgun sequencing of the Sargasso Sea
分子名称: SULFATE ION, enolase
著者Bonanno, J.B, Freeman, J, Bain, K.T, Zhang, F, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-06-20
公開日2008-07-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of an enolase protein from the environmental genome shotgun sequencing of the Sargasso Sea
To be Published
3DJG
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BU of 3djg by Molmil
Catalytic cycle of human glutathione reductase near 1 A resolution
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Glutathione reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Berkholz, D.S, Faber, H.R, Savvides, S.N, Karplus, P.A.
登録日2008-06-23
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Catalytic cycle of human glutathione reductase near 1 A resolution.
J.Mol.Biol., 382, 2008
3DK6
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BU of 3dk6 by Molmil
Crystal structure of mutant ABL kinase domain in complex with small molecule fragment
分子名称: 2-amino-5-[3-(1-ethyl-1H-pyrazol-5-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N,N-dimethylbenzamide, Proto-oncogene tyrosine-protein kinase ABL1
著者Lewis, H.A.
登録日2008-06-24
公開日2008-07-29
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal structure of mutant ABL kinase domain in complex with small molecule fragment
To be Published
3DKK
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BU of 3dkk by Molmil
Aged Form of Human Butyrylcholinesterase Inhibited by Tabun
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Nachon, F, Carletti, E.
登録日2008-06-25
公開日2008-12-02
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Aging of Cholinesterases Phosphylated by Tabun Proceeds through O-Dealkylation.
J.Am.Chem.Soc., 130, 2008
3DL8
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BU of 3dl8 by Molmil
Structure of the complex of aquifex aeolicus SecYEG and bacillus subtilis SecA
分子名称: Preprotein translocase subunit secY, Protein translocase subunit secA, Protein-export membrane protein secG, ...
著者Nam, Y, Zimmer, J, Rapoport, T.A.
登録日2008-06-26
公開日2008-12-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (7.5 Å)
主引用文献Structure of a complex of the ATPase SecA and the protein-translocation channel.
Nature, 455, 2008
3DNZ
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BU of 3dnz by Molmil
Thermolysin by LB nanotemplate method before high X-Ray dose on ESRF ID14-2 beamline
分子名称: CALCIUM ION, LYSINE, Thermolysin, ...
著者Pechkova, E, Tripathi, S.K, Nicolini, C.
登録日2008-07-03
公開日2009-07-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DGZ
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BU of 3dgz by Molmil
Crystal Structure of Mouse Mitochondrial Thioredoxin Reductase, C-terminal 3-residue truncation
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase 2, [(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE
著者Eckenroth, B.E, Hondal, R.J, Everse, S.J.
登録日2008-06-16
公開日2009-06-16
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Mouse Mitochondrial Thioredoxin Reductase, C-terminal 3-residue truncation
To be Published
3DH5
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BU of 3dh5 by Molmil
Crystal structure of bovine pancreatic ribonuclease A (wild-type)
分子名称: CHLORIDE ION, Ribonuclease pancreatic, SULFATE ION
著者Kurpiewska, K, Font, J, Ribo, M, Vilanova, M, Lewinski, K.
登録日2008-06-17
公開日2008-07-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray crystallographic studies of RNase A variants engineered at the most destabilizing positions of the main hydrophobic core: further insight into protein stability
Proteins, 77, 2009
3DP8
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BU of 3dp8 by Molmil
Structural characterization of a putative endogenous metal chelator in the periplasmic nickel transporter NikA (nickel butane-1,2,4-tricarboxylate form)
分子名称: (2R)-butane-1,2,4-tricarboxylic acid, ACETATE ION, CHLORIDE ION, ...
著者Cherrier, M.V, Cavazza, C, Bochot, C, Lemaire, D, Fontecilla-Camps, J.C.
登録日2008-07-07
公開日2008-09-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural characterization of a putative endogenous metal chelator in the periplasmic nickel transporter NikA
Biochemistry, 47, 2008
3DFH
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BU of 3dfh by Molmil
crystal structure of putative mandelate racemase / muconate lactonizing enzyme from Vibrionales bacterium SWAT-3
分子名称: SODIUM ION, mandelate racemase
著者Malashkevich, V.N, Toro, R, Wasserman, S.R, Meyer, A.J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-06-12
公開日2008-07-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献crystal structure of putative mandelate racemase / muconate lactonizing enzyme from Vibrionales bacterium SWAT-3
To be Published
3DG1
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BU of 3dg1 by Molmil
Segment SSTNVG derived from IAPP
分子名称: SSTNVG from Islet Amyloid Polypeptide
著者Wiltzius, J.J, Sievers, S.A, Sawaya, M.R, Cascio, D, Eisenberg, D.
登録日2008-06-12
公開日2008-07-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Atomic structure of the cross-beta spine of islet amyloid polypeptide (amylin).
Protein Sci., 17, 2008
3DGH
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BU of 3dgh by Molmil
Crystal Structure of Drosophila Thioredoxin Reductase, C-terminal 8-residue truncation
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, Thioredoxin reductase 1, ...
著者Eckenroth, B.E, Hondal, R.J, Everse, S.J.
登録日2008-06-13
公開日2009-06-16
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.745 Å)
主引用文献Crystal Structure of Drosophila Thioredoxin Reductase, C-terminal 8-residue truncation
To be Published
3DHU
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BU of 3dhu by Molmil
Crystal structure of an alpha-amylase from Lactobacillus plantarum
分子名称: Alpha-amylase
著者Bonanno, J.B, Dickey, M, Bain, K.T, Iizuka, M, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-06-18
公開日2008-08-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of an alpha-amylase from Lactobacillus plantarum
To be Published
3DI7
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BU of 3di7 by Molmil
Crystal structure of bovine pancreatic ribonuclease A variant (V54A)
分子名称: CHLORIDE ION, Ribonuclease pancreatic, SULFATE ION
著者Kurpiewska, K, Font, J, Ribo, M, Vilanova, M, Lewinski, K.
登録日2008-06-20
公開日2008-07-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray crystallographic studies of RNase A variants engineered at the most destabilizing positions of the main hydrophobic core: further insight into protein stability
Proteins, 77, 2009
3DIN
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BU of 3din by Molmil
Crystal structure of the protein-translocation complex formed by the SecY channel and the SecA ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Zimmer, J, Nam, Y, Rapoport, T.A.
登録日2008-06-20
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Structure of a complex of the ATPase SecA and the protein-translocation channel.
Nature, 455, 2008
3DK7
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BU of 3dk7 by Molmil
Crystal structure of mutant ABL kinase domain in complex with small molecule fragment
分子名称: 2-amino-5-[3-(1-ethyl-1H-pyrazol-5-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N,N-dimethylbenzamide, Proto-oncogene tyrosine-protein kinase ABL1, SULFATE ION
著者Lewis, H.A.
登録日2008-06-24
公開日2008-07-29
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structure of mutant ABL kinase domain in complex with small molecule fragment
To be Published
3DKT
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BU of 3dkt by Molmil
Crystal structure of Thermotoga maritima encapsulin
分子名称: Maritimacin, Putative uncharacterized protein
著者Sutter, M, Boehringer, D, Gutmann, S, Weber-Ban, E, Ban, N.
登録日2008-06-26
公開日2008-09-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.104 Å)
主引用文献Structural basis of enzyme encapsulation into a bacterial nanocompartment
Nat.Struct.Mol.Biol., 15, 2008
3DLK
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BU of 3dlk by Molmil
Crystal Structure of an engineered form of the HIV-1 Reverse Transcriptase, RT69A
分子名称: Reverse transcriptase/ribonuclease H, SULFATE ION, p51 RT
著者Ho, W.C, Bauman, J.D, Himmel, D.M, Das, K, Arnold, E.
登録日2008-06-27
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal engineering of HIV-1 reverse transcriptase for structure-based drug design.
Nucleic Acids Res., 36, 2008
3DLS
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BU of 3dls by Molmil
Crystal structure of human PAS kinase bound to ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PAS domain-containing serine/threonine-protein kinase
著者Antonysamy, S, Bonanno, J.B, Romero, R, Russell, M, Iizuka, M, Gheyi, T, Wasserman, S.R, Rutter, J, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-06-29
公開日2008-08-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural bases of PAS domain-regulated kinase (PASK) activation in the absence of activation loop phosphorylation.
J.Biol.Chem., 285, 2010
3DM1
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BU of 3dm1 by Molmil
Crystal structure of the complex of human chromobox homolog 3 (CBX3) with peptide
分子名称: Chromobox protein homolog 3, Histone-lysine N-methyltransferase, H3 lysine-9 specific 3
著者Amaya, M.F, Ravichandran, M, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
登録日2008-06-30
公開日2008-08-19
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of the chromodomain of Cbx3 bound to methylated peptides from histone h1 and G9a.
Plos One, 7, 2012
3DOM
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BU of 3dom by Molmil
Crystal Structure of the complex between Tfb5 and the C-terminal domain of Tfb2
分子名称: RNA polymerase II transcription factor B subunit 2, RNA polymerase II transcription factor B subunit 5
著者Kainov, D.E, Cavarelli, J, Egly, J.M, Poterszman, A.
登録日2008-07-04
公開日2008-08-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for group A trichothiodystrophy
Nat.Struct.Mol.Biol., 15, 2008
3DP2
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BU of 3dp2 by Molmil
Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with compound 3j
分子名称: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase, 4-bromo-N'-[(1E)-(3,5-dibromo-2,4-dihydroxyphenyl)methylidene]benzohydrazide, BENZAMIDINE, ...
著者Zhang, L, He, L, Liu, X, Liu, H, Shen, X, Jiang, H.
登録日2008-07-07
公開日2009-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovering potent inhibitors against the beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) of Helicobacter pylori: structure-based design, synthesis, bioassay, and crystal structure determination.
J.Med.Chem., 52, 2009
3DPX
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BU of 3dpx by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 5000 Atmospheres: Structure 26 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DPW
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BU of 3dpw by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1 Atmosphere Number 1: Structure 1 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQ5
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BU of 3dq5 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1960 Atmospheres: Structure 19 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008

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