PDB: 97310 件ウェブページステータス検索Chemie searchBIRD

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6U51	Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB) Complexed with Sudan ebolavirus Nucleoprotein C-terminal Domain 610-738 分子名称: Anti-Sudan ebolavirus Nucleoprotein Single Domain Antibody Sudan B (SB), Nucleoprotein 著者 Taylor, A.B, Sherwood, L.J, Hart, P.J, Hayhurst, A. 登録日 2019-08-26 公開日 2019-11-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Paratope Duality and Gullying are Among the Atypical Recognition Mechanisms Used by a Trio of Nanobodies to Differentiate Ebolavirus Nucleoproteins. J.Mol.Biol., 431, 2019
4WJ5	Structure of HLA-A2 in complex with an altered peptide ligands based on Mart-1 variant epitope 分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ... 著者 Celie, P.H.N, Rodenko, B, Ovaa, H. 登録日 2014-09-29 公開日 2014-10-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Altered Peptide Ligands Revisited: Vaccine Design through Chemically Modified HLA-A2-Restricted T Cell Epitopes. J Immunol., 193, 2014
4WGF	YcaC from Pseudomonas aeruginosa with hexane-2,5-diol and covalent acrylamide 分子名称: (2R,5R)-hexane-2,5-diol, CHLORIDE ION, PROPIONAMIDE, ... 著者 Groftehauge, M.K, Truan, D, Vasil, A, Denny, P.W, Vasil, M.L, Pohl, E. 登録日 2014-09-18 公開日 2015-07-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.34020686 Å) 主引用文献 Crystal Structure of a Hidden Protein, YcaC, a Putative Cysteine Hydrolase from Pseudomonas aeruginosa, with and without an Acrylamide Adduct. Int J Mol Sci, 16, 2015
3NRZ	Crystal Structure of Bovine Xanthine Oxidase in Complex with Hypoxanthine 分子名称: DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Cao, H, Pauff, J.M, Hille, R. 登録日 2010-07-01 公開日 2010-07-14 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Substrate orientation and catalytic specificity in the action of xanthine oxidase: the sequential hydroxylation of hypoxanthine to uric acid. J.Biol.Chem., 285, 2010
3NVV	Crystal Structure of Bovine Xanthine Oxidase in Complex with Arsenite 分子名称: ARSENITE, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Cao, H, Hille, R. 登録日 2010-07-08 公開日 2011-01-19 最終更新日 2012-05-09 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 X-ray Crystal Structure of Arsenite-Inhibited Xanthine Oxidase: Mu-Sulfido,Mu-Oxo Double Bridge between Molybdenum and Arsenic in the Active Site. J.Am.Chem.Soc., 133, 2011
8JCH	Cryo-EM structure of yeast Rat1-bound Pol II pre-termination transcription complex 1 (Pol II Rat1-PTTC1) 分子名称: 5'-3' exoribonuclease 2, DNA (38-MER), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Zeng, Y, Zhang, Y. 登録日 2023-05-11 公開日 2024-01-31 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural basis of exoribonuclease-mediated mRNA transcription termination. Nature, 628, 2024
7QI2	Magic-angle spinning NMR structure of the human voltage-dependent anion channel 1 (E73V/C127A/C232S) in DMPC lipid bilayers 分子名称: Voltage-dependent anion-selective channel protein 1 著者 Najbauer, E.E, Andreas, L.B. 登録日 2021-12-14 公開日 2022-03-16 最終更新日 2024-06-19 実験手法 SOLID-STATE NMR 主引用文献 Structure and Gating Behavior of the Human Integral Membrane Protein VDAC1 in a Lipid Bilayer. J.Am.Chem.Soc., 144, 2022
8IPB	Wheat 80S ribosome pausing on AUG-Stop with cycloheximide 分子名称: 18S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, 40S ribosomal protein eL8, ... 著者 Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T. 登録日 2023-03-14 公開日 2024-02-21 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1. Nat.Chem.Biol., 20, 2024
7OHU	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B 分子名称: 25S rRNA, 5.8S rRNA, 60S ribosomal protein L13-A, ... 著者 Milkereit, P, Poell, G. 登録日 2021-05-11 公開日 2021-11-03 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors. Plos One, 16, 2021
7OF1	Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Milkereit, P, Poell, G. 登録日 2021-05-04 公開日 2021-11-03 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors. Plos One, 16, 2021
7OHY	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B 分子名称: 25S rRNA, 5.8S rRNA, 60S ribosomal protein L13-A, ... 著者 Milkereit, P, Poell, G. 登録日 2021-05-11 公開日 2021-11-03 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors. Plos One, 16, 2021
3P5J	The structure of the human RNase H2 complex defines key interaction interfaces relevant to enzyme function and human disease 分子名称: Ribonuclease H2 subunit A, Ribonuclease H2 subunit B, Ribonuclease H2 subunit C 著者 Bubeck, D, Graham, S.C, Jones, E.Y. 登録日 2010-10-08 公開日 2010-11-17 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The Structure of the Human RNase H2 Complex Defines Key Interaction Interfaces Relevant to Enzyme Function and Human Disease. J.Biol.Chem., 286, 2011
8K5P	Cryo-EM structure of yeast Rat1-bound Pol II pre-termination transcription complex 2 (Pol II Rat1-PTTC2) 分子名称: 5'-3' exoribonuclease 2, DNA (38-MER), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Zeng, Y, Zhang, Y. 登録日 2023-07-23 公開日 2024-01-31 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural basis of exoribonuclease-mediated mRNA transcription termination. Nature, 628, 2024
2W8L	Y-family DNA polymerase Dpo4 bypassing N2-naphthyl-guanine adduct in anti orientation 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*DOC)-3', 5'-D(*TP*CP*AP*CP*N2GP*GP*AP*AP*TP*CP *CP*TP*TP*CP*CP*CP*CP*C)-3', ... 著者 Eoff, R.L, Zhang, H, Egli, M, Guengerich, F.P. 登録日 2009-01-16 公開日 2009-01-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Versatility of Y-Family Sulfolobus Solfataricus DNA Polymerase Dpo4 in Translesion Synthesis Past Bulky N2-Alkylguanine Adducts. J.Biol.Chem., 284, 2009
2W8K	Y-family DNA polymerase Dpo4 bypassing N2-naphthyl-guanine adduct in syn orientation 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*DOC)-3', 5'-D(*TP*CP*AP*CP*N2GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3', ... 著者 Eoff, R.L, Zhang, H, Egli, M, Guengerich, F.P. 登録日 2009-01-16 公開日 2009-01-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Versatility of Y-Family Sulfolobus Solfataricus DNA Polymerase Dpo4 in Translesion Synthesis Past Bulky N2-Alkylguanine Adducts. J.Biol.Chem., 284, 2009
6VY9	Crystal structure of NotF prenyltransferase 分子名称: Deoxybrevianamide E synthase notF 著者 Dan, Q, Smith, J.L. 登録日 2020-02-25 公開日 2021-02-03 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.19 Å) 主引用文献 Data Science-Driven Analysis of Substrate-Permissive Diketopiperazine Reverse Prenyltransferase NotF: Applications in Protein Engineering and Cascade Biocatalytic Synthesis of (-)-Eurotiumin A. J.Am.Chem.Soc., 144, 2022
3MAV	Crystal structure of Plasmodium vivax putative farnesyl pyrophosphate synthase (Pv092040) 分子名称: Farnesyl pyrophosphate synthase, SULFATE ION 著者 Dong, A, Dunford, J, Lew, J, Wernimont, A.K, Ren, H, Zhao, Y, Koeieradzki, I, Opperman, U, Sundstrom, M, Weigelt, J, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Hui, R, Artz, J.D, Structural Genomics Consortium (SGC) 登録日 2010-03-24 公開日 2010-04-14 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Molecular characterization of a novel geranylgeranyl pyrophosphate synthase from Plasmodium parasites. J.Biol.Chem., 286, 2011
4OKQ	Crystal structure of the single-stranded RNA binding protein HutP from Geobacillus thermodenitrificans 分子名称: HISTIDINE, Hut operon positive regulatory protein, MAGNESIUM ION 著者 Thiruselvam, V, Ponnuswamy, M.N, Kumarevel, T.S. 登録日 2014-01-22 公開日 2014-03-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of the single-stranded RNA binding protein HutP from Geobacillus thermodenitrificans Biochem.Biophys.Res.Commun., 446, 2014
3D9S	Human Aquaporin 5 (AQP5) - High Resolution X-ray Structure 分子名称: Aquaporin-5, O-[(S)-{[(2S)-2-(hexanoyloxy)-3-(tetradecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-D-serine 著者 Horsefield, R, Norden, K, Fellert, M, Backmark, A, Tornroth-Horsefield, S, Terwisscha Van Scheltinga, A.C, Kvassman, J, Kjellbom, P, Johanson, U, Neutze, R. 登録日 2008-05-27 公開日 2008-08-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 High-resolution x-ray structure of human aquaporin 5 Proc.Natl.Acad.Sci.Usa, 105, 2008
3N8W	Crystal Structure of R120Q/Native Cyclooxygenase-1 Heterodimer mutant in complex with Flurbiprofen 分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLURBIPROFEN, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Sidhu, R.S. 登録日 2010-05-28 公開日 2010-07-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Comparison of Cyclooxygenase-1 Crystal Structures: Cross-Talk between Monomers Comprising Cyclooxygenase-1 Homodimers Biochemistry, 49, 2010
3N8Y	Structure of Aspirin Acetylated Cyclooxygenase-1 in Complex with Diclofenac 分子名称: 2-HYDROXYBENZOIC ACID, 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Sidhu, R.S. 登録日 2010-05-28 公開日 2010-07-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Comparison of Cyclooxygenase-1 Crystal Structures: Cross-Talk between Monomers Comprising Cyclooxygenase-1 Homodimers Biochemistry, 49, 2010
3N8Z	Crystal Structure of Cyclooxygenase-1 in Complex with Flurbiprofen 分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLURBIPROFEN, ... 著者 Sidhu, R.S. 登録日 2010-05-28 公開日 2010-07-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Comparison of Cyclooxygenase-1 Crystal Structures: Cross-Talk between Monomers Comprising Cyclooxygenase-1 Homodimers Biochemistry, 49, 2010
3NS1	Crystal Structure of Bovine Xanthine Oxidase in Complex with 6-Mercaptopurine 分子名称: 9H-purine-6-thiol, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Cao, H, Pauff, J.M, Hille, R. 登録日 2010-07-01 公開日 2010-07-14 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Substrate orientation and catalytic specificity in the action of xanthine oxidase: the sequential hydroxylation of hypoxanthine to uric acid. J.Biol.Chem., 285, 2010
8ESQ	Ytm1 associated nascent 60S ribosome State 2 分子名称: 25S rRNA (cytosine-C(5))-methyltransferase nop2, 60S ribosomal protein L13, 60S ribosomal protein L14, ... 著者 Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M. 登録日 2022-10-14 公開日 2022-11-30 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022
8EUY	Ytm1 associated nascent 60S ribosome (-fkbp39) State 1A 分子名称: 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15-A, ... 著者 Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M. 登録日 2022-10-19 公開日 2022-11-30 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022

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