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8DR4
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BU of 8dr4 by Molmil
Open state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) without NTD
分子名称: DNA (5'-D(P*AP*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*TP*TP*T)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), ...
著者Schrecker, M, Hite, R.K.
登録日2022-07-20
公開日2022-08-17
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR7
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BU of 8dr7 by Molmil
Open state of RFC:PCNA bound to a nicked dsDNA
分子名称: DNA (26-MER), DNA (5'-D(P*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3'), DNA (5'-D(P*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), ...
著者Schrecker, M, Hite, R.K.
登録日2022-07-20
公開日2022-08-17
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR3
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BU of 8dr3 by Molmil
Closed state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) with NTD
分子名称: DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*TP*TP*T)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), DNA (5'-D(P*TP*TP*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*A)-3'), ...
著者Schrecker, M, Hite, R.K.
登録日2022-07-20
公開日2022-08-17
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR5
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BU of 8dr5 by Molmil
Open state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) with NTD
分子名称: DNA (5'-D(P*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*TP*TP*T)-3'), DNA (5'-D(P*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), ...
著者Schrecker, M, Hite, R.K.
登録日2022-07-20
公開日2022-08-17
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR1
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BU of 8dr1 by Molmil
Consensus closed state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2)
分子名称: DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*TP*TP*T)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), DNA (5'-D(P*TP*TP*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*A)-3'), ...
著者Schrecker, M, Hite, R.K.
登録日2022-07-20
公開日2022-08-17
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.14 Å)
主引用文献Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
2VE6
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BU of 2ve6 by Molmil
Crystal structure of a Murine MHC class I H2-Db molecule in complex with a photocleavable peptide
分子名称: BETA-2-MICROGLOBULIN, H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN D-B ALPHA CHAIN, SENDAI VIRUS EPITOPE RESIDUES 324-332 MODIFIED AT P7
著者Grotenbreg, G.M, Roan, N.R, Guillen, E, Meijers, R, Wang, J.H, Bell, G.W, Starnbach, M.N, Ploegh, H.L.
登録日2007-10-17
公開日2008-01-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Discovery of Cd8+ T Cell Epitopes in Chlamydia Trachomatis Infection Through Use of Caged Class I Mhc Tetramers.
Proc.Natl.Acad.Sci.USA, 105, 2008
6GT7
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BU of 6gt7 by Molmil
NMR structure of the free helix bundle domain from the functional pRN1 primase
分子名称: functional pRN1 primase
著者Boudet, J, Lipps, G, Allain, F.
登録日2018-06-15
公開日2018-12-26
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A Small Helical Bundle Prepares Primer Synthesis by Binding Two Nucleotides that Enhance Sequence-Specific Recognition of the DNA Template.
Cell, 176, 2019
1A1O
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BU of 1a1o by Molmil
MHC CLASS I MOLECULE B*5301 COMPLEXED WITH PEPTIDE LS6 (KPIVQYDNF) FROM THE MALARIA PARASITE P. FALCIPARUM
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain, ...
著者Smith, K.J, Reid, S.W, Harlos, K, Mcmichael, A.J, Stuart, D.I, Bell, J.I, Jones, E.Y.
登録日1997-12-11
公開日1998-04-08
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bound water structure and polymorphic amino acids act together to allow the binding of different peptides to MHC class I HLA-B53.
Immunity, 4, 1996
1A1M
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BU of 1a1m by Molmil
MHC CLASS I MOLECULE B*5301 COMPLEXED WITH PEPTIDE TPYDINQML FROM GAG PROTEIN OF HIV2
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain, ...
著者Smith, K.J, Reid, S.W, Harlos, K, Mcmichael, A.J, Stuart, D.I, Bell, J.I, Jones, E.Y.
登録日1997-12-11
公開日1998-04-08
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bound water structure and polymorphic amino acids act together to allow the binding of different peptides to MHC class I HLA-B53.
Immunity, 4, 1996
1A1N
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BU of 1a1n by Molmil
MHC CLASS I MOLECULE B*3501 COMPLEXED WITH PEPTIDE VPLRPMTY FROM THE NEF PROTEIN (75-82) OF HIV1
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain, ...
著者Smith, K.J, Reid, S.W, Stuart, D.I, Mcmichael, A.J, Jones, E.Y, Bell, J.I.
登録日1997-12-11
公開日1998-04-08
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An altered position of the alpha 2 helix of MHC class I is revealed by the crystal structure of HLA-B*3501.
Immunity, 4, 1996
5A66
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BU of 5a66 by Molmil
Crystal structure of AtTTM3 in complex with tripolyphosphate and manganese ion (form A)
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, TRIPHOSPHATE, ...
著者Martinez, J, Truffault, V, Hothorn, M.
登録日2015-06-24
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A61
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BU of 5a61 by Molmil
Crystal structure of full-length E. coli ygiF in complex with tripolyphosphate and two manganese ions.
分子名称: 1,2-ETHANEDIOL, INORGANIC TRIPHOSPHATASE, MANGANESE (II) ION, ...
著者Martinez, J, Truffault, V, Hothorn, M.
登録日2015-06-23
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A5Y
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BU of 5a5y by Molmil
Crystal structure of AtTTM3 in complex with tripolyphosphate and magnesium ion (form A)
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, TRIPHOSPHATE, ...
著者Martinez, J, Truffault, V, Hothorn, M.
登録日2015-06-23
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A60
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BU of 5a60 by Molmil
Crystal structure of full-length E. coli ygiF in complex with tripolyphosphate and two magnesium ions
分子名称: 1,2-ETHANEDIOL, INORGANIC TRIPHOSPHATASE, MAGNESIUM ION, ...
著者Martinez, J, Truffault, V, Hothorn, M.
登録日2015-06-23
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A64
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BU of 5a64 by Molmil
Crystal structure of mouse thiamine triphosphatase in complex with thiamine triphosphate.
分子名称: 1,2-ETHANEDIOL, THIAMINE TRIPHOSPHATASE, TRIETHYLENE GLYCOL, ...
著者Martinez, J, Truffault, V, Hothorn, M.
登録日2015-06-24
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A67
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BU of 5a67 by Molmil
Crystal structure of AtTTM3 in complex with tripolyphosphate and manganese ion (form B)
分子名称: MANGANESE (II) ION, TRIPHOSPHATE, TRIPHOSPHATE TUNEL METALLOENZYME 3
著者Martinez, J, Truffault, V, Hothorn, M.
登録日2015-06-24
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A68
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BU of 5a68 by Molmil
Crystal structure of the AtTTM3 product complex with two orthophosphates and manganese ions (form B)
分子名称: MANGANESE (II) ION, PHOSPHATE ION, TRIPHOSPHATE TUNEL METALLOENZYME 3
著者Martinez, J, Truffault, V, Hothorn, M.
登録日2015-06-24
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A65
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BU of 5a65 by Molmil
Crystal structure of mouse thiamine triphosphatase in complex with thiamine diphosphate, orthophosphate and magnesium ions.
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, PHOSPHATE ION, ...
著者Martinez, J, Truffault, V, Hothorn, M.
登録日2015-06-24
公開日2015-08-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
1JPH
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BU of 1jph by Molmil
Ile260Thr mutant of Human UroD, human uroporphyrinogen III decarboxylase
分子名称: UROPORPHYRINOGEN DECARBOXYLASE
著者Phillips, J.D, Parker, T.L, Schubert, H.L, Whitby, F.G, Hill, C.P, Kushner, J.P.
登録日2001-08-02
公開日2001-12-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Functional consequences of naturally occurring mutations in human uroporphyrinogen decarboxylase.
Blood, 98, 2001
4IOX
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BU of 4iox by Molmil
The structure of the herpes simplex virus DNA-packaging motor pUL15 C-terminal nuclease domain provides insights into cleavage of concatemeric viral genome precursors
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL, ...
著者Selvarajan Sigamani, S, Zhao, H, Kamau, Y, Tang, L.
登録日2013-01-08
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.458 Å)
主引用文献The Structure of the Herpes Simplex Virus DNA-Packaging Terminase pUL15 Nuclease Domain Suggests an Evolutionary Lineage among Eukaryotic and Prokaryotic Viruses.
J.Virol., 87, 2013
6D0Q
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BU of 6d0q by Molmil
Structure of a DNA retention-prone PCNA variant
分子名称: Proliferating cell nuclear antigen
著者Kelch, B.A, Gaubitz, C.
登録日2018-04-10
公開日2019-05-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.80051017 Å)
主引用文献Effective mismatch repair depends on timely control of PCNA retention on DNA by the Elg1 complex.
Nucleic Acids Res., 47, 2019
6D0R
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BU of 6d0r by Molmil
Structure of a DNA retention-prone PCNA variant
分子名称: Proliferating cell nuclear antigen
著者Kelch, B.A, Gaubitz, C.
登録日2018-04-10
公開日2019-05-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.85856962 Å)
主引用文献Effective mismatch repair depends on timely control of PCNA retention on DNA by the Elg1 complex.
Nucleic Acids Res., 47, 2019
1JPK
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BU of 1jpk by Molmil
Gly156Asp mutant of Human UroD, human uroporphyrinogen III decarboxylase
分子名称: UROPORPHYRINOGEN DECARBOXYLASE
著者Phillips, J.D, Parker, T.L, Schubert, H.L, Whitby, F.G, Hill, C.P, Kushner, J.P.
登録日2001-08-02
公開日2001-12-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Functional consequences of naturally occurring mutations in human uroporphyrinogen decarboxylase.
Blood, 98, 2001
5JNE
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BU of 5jne by Molmil
E2-SUMO-Siz1 E3-SUMO-PCNA complex
分子名称: E3 SUMO-protein ligase SIZ1,Ubiquitin-like protein SMT3, GLYCEROL, Proliferating cell nuclear antigen, ...
著者Lima, C.D, Streich Jr, F.C.
登録日2016-04-29
公開日2016-08-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Capturing a substrate in an activated RING E3/E2-SUMO complex.
Nature, 536, 2016
1JPI
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BU of 1jpi by Molmil
Phe232Leu mutant of human UROD, human uroporphyrinogen III decarboxylase
分子名称: UROPORPHYRINOGEN DECARBOXYLASE
著者Phillips, J.D, Parker, T.L, Schubert, H.L, Whitby, F.G, Hill, C.P, Kushner, J.P.
登録日2001-08-02
公開日2001-12-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Functional consequences of naturally occurring mutations in human uroporphyrinogen decarboxylase.
Blood, 98, 2001

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件を2024-09-04に公開中

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