PDB: 46984 件ウェブページステータス検索Chemie searchBIRD

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7TT1	BamABCDE bound to substrate EspP class 4 分子名称: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ... 著者 Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D. 登録日 2022-01-31 公開日 2022-03-30 最終更新日 2022-04-13 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding. Cell, 185, 2022
7TMP	V1 complex lacking subunit C from Saccharomyces cerevisiae, State 2 分子名称: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, MAGNESIUM ION, ... 著者 Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L. 登録日 2022-01-19 公開日 2022-04-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation. Nat.Struct.Mol.Biol., 29, 2022
7TMM	Complete V1 Complex from Saccharomyces cerevisiae 分子名称: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ... 著者 Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L. 登録日 2022-01-19 公開日 2022-04-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation. Nat.Struct.Mol.Biol., 29, 2022
7TMO	V1 complex lacking subunit C from Saccharomyces cerevisiae, State 1 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, H(+)-transporting two-sector ATPase, ... 著者 Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L. 登録日 2022-01-19 公開日 2022-04-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation. Nat.Struct.Mol.Biol., 29, 2022
7TT2	BamABCDE bound to substrate EspP class 3 分子名称: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ... 著者 Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D. 登録日 2022-01-31 公開日 2022-03-30 最終更新日 2022-04-13 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding. Cell, 185, 2022
7TMT	V-ATPase from Saccharomyces cerevisiae, State 3 分子名称: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ... 著者 Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L. 登録日 2022-01-20 公開日 2022-04-20 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation. Nat.Struct.Mol.Biol., 29, 2022
7TMR	V-ATPase from Saccharomyces cerevisiae, State 1 分子名称: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-type proton ATPase subunit C, ... 著者 Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L. 登録日 2022-01-19 公開日 2022-04-13 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation. Nat.Struct.Mol.Biol., 29, 2022
7TMS	V-ATPase from Saccharomyces cerevisiae, State 2 分子名称: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ... 著者 Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L. 登録日 2022-01-20 公開日 2022-04-13 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation. Nat.Struct.Mol.Biol., 29, 2022
7TK5	Yeast ATP synthase State 1binding(d) with 10 mM ATP backbone model 分子名称: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... 著者 Guo, H, Rubinstein, J.L. 登録日 2022-01-17 公開日 2022-04-20 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (7.8 Å) 主引用文献 Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKE	Yeast ATP synthase State 2binding(a) with 10 mM ATP backbone model 分子名称: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... 著者 Guo, H, Rubinstein, J.L. 登録日 2022-01-17 公開日 2022-04-20 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (7.1 Å) 主引用文献 Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TK6	Yeast ATP synthase State 1catalytic(a) with 10 mM ATP backbone model 分子名称: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... 著者 Guo, H, Rubinstein, J.L. 登録日 2022-01-17 公開日 2022-04-20 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (6.5 Å) 主引用文献 Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7UZJ	Rat Kidney V1 complex with SidK and NCOA7B, State 1 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ... 著者 Abbas, Y.M, Rubinstein, J.L. 登録日 2022-05-09 公開日 2023-11-22 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structure of V-ATPase with NCOA7B To Be Published
7UZG	Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 1 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ... 著者 Rubinstein, J.L, Abbas, Y.M. 登録日 2022-05-09 公開日 2023-11-22 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structure of V-ATPase with NCOA7B To Be Published
8QFD	UFL1 E3 ligase bound 60S ribosome 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Makhlouf, L, Kulathu, Y, Zeqiraj, E. 登録日 2023-09-04 公開日 2024-02-21 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (2.2 Å) 主引用文献 The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons. Nature, 627, 2024
7V5G	20S+monoUb-CyclinB1-NT (S1) 分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ... 著者 Xu, C, Cong, Y. 登録日 2021-08-17 公開日 2021-09-22 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (4.47 Å) 主引用文献 The 20S as a stand-alone proteasome in cells can degrade the ubiquitin tag. Nat Commun, 12, 2021
7V5M	20S+monoUb-CyclinB1-NT (S2) 分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ... 著者 Xu, C, Cong, Y. 登録日 2021-08-17 公開日 2021-09-22 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.88 Å) 主引用文献 The 20S as a stand-alone proteasome in cells can degrade the ubiquitin tag. Nat Commun, 12, 2021
8Q3K	The open state of the ASFV apo-RNA polymerase 分子名称: DNA-directed RNA polymerase RPB1 homolog, DNA-directed RNA polymerase RPB10 homolog, DNA-directed RNA polymerase RPB2 homolog, ... 著者 Pilotto, S, Sykora, M, Cackett, G, Werner, F. 登録日 2023-08-04 公開日 2024-02-14 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.92 Å) 主引用文献 Structure of the recombinant RNA polymerase from African Swine Fever Virus. Nat Commun, 15, 2024
7M5L	PCNA bound to peptide mimetic with linker 分子名称: PROPANE, Peptide mimetic (ACE)RQCSMTCFYHSK(NH2) with linker, Proliferating cell nuclear antigen 著者 Vandborg, B.A, Bruning, J.B. 登録日 2021-03-24 公開日 2021-08-11 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 A cell permeable bimane-constrained PCNA-interacting peptide. Rsc Chem Biol, 2, 2021
7M5N	PCNA bound to peptide mimetic with linker 分子名称: 1,3-dimethylbenzene, Peptide mimetic (ACE)RQCSMTCFYHSK(NH2) with linker, Proliferating cell nuclear antigen 著者 Vandborg, B.A, Bruning, J.B. 登録日 2021-03-24 公開日 2021-08-11 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 A cell permeable bimane-constrained PCNA-interacting peptide. Rsc Chem Biol, 2, 2021
7MDZ	80S rabbit ribosome stalled with benzamide-CHX 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S21, ... 著者 Koga, Y, Hoang, E.M, Park, Y, Keszei, A.F.A, Murray, J, Shao, S, Liau, B.B. 登録日 2021-04-06 公開日 2021-09-01 最終更新日 2021-09-15 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Discovery of C13-Aminobenzoyl Cycloheximide Derivatives that Potently Inhibit Translation Elongation. J.Am.Chem.Soc., 143, 2021
8Q7V	Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CD2 antigen cytoplasmic tail-binding protein 2, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Riabov Bassat, D, Plaschka, C, Vorlaender, M.K. 登録日 2023-08-17 公開日 2024-04-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of human U5 snRNP late biogenesis and recycling. Nat.Struct.Mol.Biol., 31, 2024
8Q7X	Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CD2 antigen cytoplasmic tail-binding protein 2, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Riabov Bassat, D, Plaschka, C, Vorlaender, M.K. 登録日 2023-08-17 公開日 2024-04-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structural basis of human U5 snRNP late biogenesis and recycling. Nat.Struct.Mol.Biol., 31, 2024
8QBT	E. coli ApdP-stalled ribosomal complex 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S11, ... 著者 Morici, M, Wilson, D.N. 登録日 2023-08-25 公開日 2024-03-20 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (2.2 Å) 主引用文献 RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity. Nat Commun, 15, 2024
8Q7Q	Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 2) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CD2 antigen cytoplasmic tail-binding protein 2, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Riabov Bassat, D, Plaschka, C, Vorlaender, M.K. 登録日 2023-08-16 公開日 2024-04-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis of human U5 snRNP late biogenesis and recycling. Nat.Struct.Mol.Biol., 31, 2024
7SYT	Structure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022

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