8QE4
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![BU of 8qe4 by Molmil](/molmil-images/mine/8qe4) | Formation of left-handed helices by C2'-fluorinated nucleic acids under physiological salt conditions | 分子名称: | DNA (5'-D(*CP*(FRG)P*CP*(FRG)P*CP*(FRG))-3') | 著者 | El-Khoury, R, Cabrero, C, Movilla, S, Friedland, D, Thorpe, J.D, Roman, M, Orozco, M, Gonzalez, C, Damha, M. | 登録日 | 2023-08-30 | 公開日 | 2024-06-26 | 最終更新日 | 2024-07-31 | 実験手法 | SOLUTION NMR | 主引用文献 | Formation of left-handed helices by C2'-fluorinated nucleic acids under physiological salt conditions. Nucleic Acids Res., 52, 2024
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8QOR
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![BU of 8qor by Molmil](/molmil-images/mine/8qor) | Formation of left-handed helices by C2'-fluorinated nucleic acids under physiological salt conditions | 分子名称: | DNA (5'-D(*(CFL)P*(FRG)P*(CFL)P*(FRG)P*(CFL)P*(FRG))-3') | 著者 | El-Khoury, R, Cabrero, C, Movilla, S, Friedland, D, Thorpe, J.D, Roman, M, Orozco, M, Gonzalez, C, Damha, M. | 登録日 | 2023-09-29 | 公開日 | 2024-06-26 | 最終更新日 | 2024-07-31 | 実験手法 | SOLUTION NMR | 主引用文献 | Formation of left-handed helices by C2'-fluorinated nucleic acids under physiological salt conditions. Nucleic Acids Res., 52, 2024
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8QDU
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![BU of 8qdu by Molmil](/molmil-images/mine/8qdu) | Formation of left-handed helices by C2'-fluorinated nucleic acids under physiological salt conditions | 分子名称: | DNA (5'-D(*(FC)P*GP*(FC)P*GP*(FC)P*G)-3') | 著者 | El-Khoury, R, Cabrero, C, Movilla, S, Thorpe, J.D, Roman, M, Orozco, M, Gonzalez, C, Damha, M.J. | 登録日 | 2023-08-30 | 公開日 | 2024-06-26 | 最終更新日 | 2024-07-31 | 実験手法 | SOLUTION NMR | 主引用文献 | Formation of left-handed helices by C2'-fluorinated nucleic acids under physiological salt conditions. Nucleic Acids Res., 52, 2024
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4GOL
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![BU of 4gol by Molmil](/molmil-images/mine/4gol) | |
1KX3
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![BU of 1kx3 by Molmil](/molmil-images/mine/1kx3) | X-Ray Structure of the Nucleosome Core Particle, NCP146, at 2.0 A Resolution | 分子名称: | DNA (5'(ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT)3'), MANGANESE (II) ION, histone H2A.1, ... | 著者 | Davey, C.A, Sargent, D.F, Luger, K, Maeder, A.W, Richmond, T.J. | 登録日 | 2002-01-31 | 公開日 | 2002-12-25 | 最終更新日 | 2023-08-16 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution J.Mol.Biol., 319, 2002
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4GBE
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![BU of 4gbe by Molmil](/molmil-images/mine/4gbe) | |
8JNF
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![BU of 8jnf by Molmil](/molmil-images/mine/8jnf) | The cryo-EM structure of the RAD51 filament bound to the nucleosome | 分子名称: | DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ... | 著者 | Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H. | 登録日 | 2023-06-06 | 公開日 | 2024-03-27 | 最終更新日 | 2024-05-08 | 実験手法 | ELECTRON MICROSCOPY (6.91 Å) | 主引用文献 | Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site. Nature, 628, 2024
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4WU9
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![BU of 4wu9 by Molmil](/molmil-images/mine/4wu9) | Structure of cisPtNAP-NCP145 | 分子名称: | DNA (145-MER), Histone H2A type 1, Histone H2B 1.1, ... | 著者 | Chua, E.Y.D, Davey, G.E, Chin, C.F, Droge, P, Ang, W.H, Davey, C.A. | 登録日 | 2014-10-31 | 公開日 | 2015-09-02 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Stereochemical control of nucleosome targeting by platinum-intercalator antitumor agents. Nucleic Acids Res., 43, 2015
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8DJQ
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![BU of 8djq by Molmil](/molmil-images/mine/8djq) | Sliding-clamp-DnaE1 peptide | 分子名称: | ACETYL GROUP, AMINO GROUP, Beta sliding clamp, ... | 著者 | Kapur, M.K, Gray, O.J, Honzatko, R.H, Nelson, S.N. | 登録日 | 2022-07-01 | 公開日 | 2023-01-18 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Interaction of the sliding clamp with mycobacterial polymerases To Be Published
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4WU8
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![BU of 4wu8 by Molmil](/molmil-images/mine/4wu8) | Structure of trPtNAP-NCP145 | 分子名称: | DNA (145-MER), Histone H2A type 1, Histone H2B 1.1, ... | 著者 | Chua, E.Y.D, Davey, C.A. | 登録日 | 2014-10-31 | 公開日 | 2015-09-02 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | 主引用文献 | Stereochemical control of nucleosome targeting by platinum-intercalator antitumor agents. Nucleic Acids Res., 43, 2015
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8BJM
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169D
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![BU of 169d by Molmil](/molmil-images/mine/169d) | THE SOLUTION STRUCTURE OF THE R(GCG)D(TATACCC):D(GGGTATACGC) OKAZAKI FRAGMENT CONTAINS TWO DISTINCT DUPLEX MORPHOLOGIES CONNECTED BY A JUNCTION | 分子名称: | DNA (5'-D(*GP*GP*GP*TP*AP*TP*AP*CP*GP*C)-3'), DNA/RNA (5'-R(*GP*CP*G)-D(P*TP*AP*TP*AP*CP*CP*C)-3') | 著者 | Salazar, M, Fedoroff, O.Y, Zhu, L, Reid, B.R. | 登録日 | 1994-04-11 | 公開日 | 1994-07-31 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | The solution structure of the r(gcg)d(TATACCC):d(GGGTATACGC) Okazaki fragment contains two distinct duplex morphologies connected by a junction. J.Mol.Biol., 241, 1994
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2M9H
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3I7L
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![BU of 3i7l by Molmil](/molmil-images/mine/3i7l) | Crystal Structure of DDB1 in Complex with the H-Box Motif of DDB2 | 分子名称: | DNA damage-binding protein 1, DNA damage-binding protein 2 | 著者 | Li, T, Robert, E.I, Breugel, P.C.V, Strubin, M, Zheng, N. | 登録日 | 2009-07-08 | 公開日 | 2009-12-08 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | A promiscuous alpha-helical motif anchors viral hijackers and substrate receptors to the CUL4-DDB1 ubiquitin ligase machinery. Nat.Struct.Mol.Biol., 17, 2010
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8HR5
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![BU of 8hr5 by Molmil](/molmil-images/mine/8hr5) | Cryo-EM structure of the CnCas12f1-sgRNA-DNA complex | 分子名称: | DNA (28-MER), DNA (5'-D(*TP*AP*AP*CP*CP*TP*AP*AP*TP*AP*GP*AP*TP*GP*TP*GP*AP*A)-3'), Transposase, ... | 著者 | Li, F, Ji, Q. | 登録日 | 2022-12-14 | 公開日 | 2023-09-06 | 実験手法 | ELECTRON MICROSCOPY (3.73 Å) | 主引用文献 | Structure and engineering of miniature Clostridium novyi CRISPR-Cas12f1 with rare C-rich PAM specificity To Be Published
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2A6H
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![BU of 2a6h by Molmil](/molmil-images/mine/2a6h) | Crystal structure of the T. thermophilus RNA polymerase holoenzyme in complex with antibiotic sterptolydigin | 分子名称: | DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ... | 著者 | Temiakov, D, Zenkin, N, Vassylyeva, M.N, Perederina, A, Tahirov, T.H, Savkina, M, Zorov, S, Nikiforov, V, Igarashi, N, Matsugaki, N, Wakatsuki, S, Severinov, K, Vassylyev, D.G, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2005-07-02 | 公開日 | 2005-09-20 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis of transcription inhibition by antibiotic streptolydigin. Mol.Cell, 19, 2005
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2E9X
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![BU of 2e9x by Molmil](/molmil-images/mine/2e9x) | The crystal structure of human GINS core complex | 分子名称: | DNA replication complex GINS protein PSF1, DNA replication complex GINS protein PSF2, GINS complex subunit 3, ... | 著者 | Kamada, K, Hanaoka, F. | 登録日 | 2007-01-27 | 公開日 | 2007-04-10 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structure of the human GINS complex and its assembly and functional interface in replication initiation Nat.Struct.Mol.Biol., 14, 2007
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9BDC
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![BU of 9bdc by Molmil](/molmil-images/mine/9bdc) | Cryo-EM Structure of the TEFM bound Human Mitochondrial Transcription Elongation Complex in a Closed Fingers Domain Conformation | 分子名称: | DNA-directed RNA polymerase, mitochondrial, Non-Template Strand DNA (NT27mt_+1T), ... | 著者 | Herbine, K.H, Nayak, A.R, Temiakov, D. | 登録日 | 2024-04-11 | 公開日 | 2024-09-04 | 実験手法 | ELECTRON MICROSCOPY (2.54 Å) | 主引用文献 | Structural basis for substrate binding and selection by human mitochondrial RNA polymerase. Nat Commun, 15, 2024
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2IX2
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![BU of 2ix2 by Molmil](/molmil-images/mine/2ix2) | Crystal structure of the heterotrimeric PCNA from Sulfolobus solfataricus | 分子名称: | DNA POLYMERASE SLIDING CLAMP A, DNA POLYMERASE SLIDING CLAMP B, DNA POLYMERASE SLIDING CLAMP C | 著者 | Williams, G.J, Johnson, K, McMahon, S.A, Carter, L, Oke, M, Liu, H, Taylor, G.L, White, M.F, Naismith, J.H. | 登録日 | 2006-07-05 | 公開日 | 2006-10-04 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structure of the Heterotrimeric PCNA from Sulfolobus Solfataricus. Acta Crystallogr.,Sect.F, 62, 2006
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5IP3
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![BU of 5ip3 by Molmil](/molmil-images/mine/5ip3) | Tomato spotted wilt tospovirus nucleocapsid protein-ssDNA complex | 分子名称: | DNA (5'-D(P*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*T)-3'), ... | 著者 | Komoda, K, Narita, M, Yamashita, K, Tanaka, I, Yao, M. | 登録日 | 2016-03-09 | 公開日 | 2017-03-22 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus. J. Virol., 91, 2017
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7AY1
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![BU of 7ay1 by Molmil](/molmil-images/mine/7ay1) | Cryo-EM structure of USP1-UAF1 bound to mono-ubiquitinated FANCD2, and FANCI | 分子名称: | DNA (61-MER), Fanconi anemia group D2 protein, Fanconi anemia group I protein, ... | 著者 | Rennie, M.L, Arkinson, C, Walden, H. | 登録日 | 2020-11-10 | 公開日 | 2021-03-24 | 最終更新日 | 2022-07-27 | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | 主引用文献 | Structural basis of FANCD2 deubiquitination by USP1-UAF1. Nat.Struct.Mol.Biol., 28, 2021
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7OTQ
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![BU of 7otq by Molmil](/molmil-images/mine/7otq) | Cryo-EM structure of ALC1/CHD1L bound to a PARylated nucleosome | 分子名称: | Chromodomain-helicase-DNA-binding protein 1-like, DNA (149-MER) Widom 601 sequence, Histone H2A type 1, ... | 著者 | Bacic, L, Gaullier, G, Deindl, S. | 登録日 | 2021-06-10 | 公開日 | 2021-09-15 | 最終更新日 | 2024-07-17 | 実験手法 | ELECTRON MICROSCOPY (4.8 Å) | 主引用文献 | Structure and dynamics of the chromatin remodeler ALC1 bound to a PARylated nucleosome Elife, 10, 2021
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8U3K
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![BU of 8u3k by Molmil](/molmil-images/mine/8u3k) | DdmDE handover complex | 分子名称: | DNA (29-MER), DNA (5'-D(P*GP*GP*AP*AP*AP*TP*GP*TP*TP*GP*AP*AP*TP*AP*C)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), ... | 著者 | Bravo, J.P.K. | 登録日 | 2023-09-07 | 公開日 | 2024-07-10 | 実験手法 | ELECTRON MICROSCOPY (2.5 Å) | 主引用文献 | Plasmid targeting and destruction by the DdmDE bacterial defence system. Nature, 630, 2024
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6TEY
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![BU of 6tey by Molmil](/molmil-images/mine/6tey) | |
150D
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![BU of 150d by Molmil](/molmil-images/mine/150d) | GUANINE.1,N6-ETHENOADENINE BASE-PAIRS IN THE CRYSTAL STRUCTURE OF D(CGCGAATT(EDA)GCG) | 分子名称: | DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDA)P*GP*CP*G)-3'), MAGNESIUM ION | 著者 | Leonard, G.A, McAuley-Hecht, K.E, Gibson, N.J, Brown, T, Watson, W.P, Hunter, W.N. | 登録日 | 1993-12-02 | 公開日 | 1994-05-31 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | Guanine-1,N6-ethenoadenine base pairs in the crystal structure of d(CGCGAATT(epsilon dA)GCG). Biochemistry, 33, 1994
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