3TAE
| 5-hydroxycytosine paired with dAMP in RB69 gp43 | 分子名称: | DNA (5'-D(*CP*CP*(5OC)P*GP*GP*TP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*AP*CP*CP*A)-3'), DNA polymerase, ... | 著者 | Zahn, K.E. | 登録日 | 2011-08-04 | 公開日 | 2011-11-09 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2.71 Å) | 主引用文献 | The miscoding potential of 5-hydroxycytosine arises due to template instability in the replicative polymerase active site. Biochemistry, 50, 2011
|
|
3TAB
| 5-hydroxycytosine paired with dGMP in RB69 gp43 | 分子名称: | DNA (5'-D(*CP*CP*(5OC)P*GP*GP*TP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*AP*CP*CP*G)-3'), DNA polymerase, ... | 著者 | Zahn, K.E. | 登録日 | 2011-08-03 | 公開日 | 2011-11-09 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | The miscoding potential of 5-hydroxycytosine arises due to template instability in the replicative polymerase active site. Biochemistry, 50, 2011
|
|
126D
| |
7EJE
| human RAD51 post-synaptic complex | 分子名称: | DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA repair protein RAD51 homolog 1, ... | 著者 | Zhao, L.Y, Xu, J.F, Wang, H.W. | 登録日 | 2021-04-02 | 公開日 | 2022-03-16 | 最終更新日 | 2024-06-05 | 実験手法 | ELECTRON MICROSCOPY (3.98 Å) | 主引用文献 | Mechanisms of distinctive mismatch tolerance between Rad51 and Dmc1 in homologous recombination. Nucleic Acids Res., 49, 2021
|
|
2ZUC
| |
6M05
| Trimolecular G-quadruplex | 分子名称: | DNA (5'-D(*GP*TP*TP*AP*GP*G)-3') | 著者 | Jing, H.T, Fu, W.Q, Zhang, N. | 登録日 | 2020-02-20 | 公開日 | 2021-01-20 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | NMR structural study on the self-trimerization of d(GTTAGG) into a dynamic trimolecular G-quadruplex assembly preferentially in Na+ solution with a moderate K+ tolerance. Nucleic Acids Res., 49, 2021
|
|
6P94
| Human APE1 C65A AP-endonuclease product complex | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... | 著者 | Whitaker, A.W, Stark, W.J, Freudenthal, B.D. | 登録日 | 2019-06-09 | 公開日 | 2020-01-01 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (2.09 Å) | 主引用文献 | Functions of the major abasic endonuclease (APE1) in cell viability and genotoxin resistance. Mutagenesis, 35, 2020
|
|
1NFK
| STRUCTURE OF THE NUCLEAR FACTOR KAPPA-B (NF-KB) P50 HOMODIMER | 分子名称: | DNA (5'-D(*TP*GP*GP*GP*AP*AP*TP*TP*CP*CP*C)-3'), PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB)) | 著者 | Ghosh, G, Van Duyne, G, Ghosh, S, Sigler, P.B. | 登録日 | 1995-02-28 | 公開日 | 1996-12-23 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structure of NF-kappa B p50 homodimer bound to a kappa B site. Nature, 373, 1995
|
|
6P93
| Human APE1 K98A AP-endonuclease product complex | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... | 著者 | Whitaker, A.W, Stark, W.J, Freudenthal, B.D. | 登録日 | 2019-06-09 | 公開日 | 2020-01-01 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Functions of the major abasic endonuclease (APE1) in cell viability and genotoxin resistance. Mutagenesis, 35, 2020
|
|
2ZUB
| Left handed RadA | 分子名称: | DNA repair and recombination protein radA | 著者 | Chang, Y.W, Ko, T.P, Wang, T.F, Wang, A.H.J. | 登録日 | 2008-10-15 | 公開日 | 2009-04-07 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Three new structures of left-handed RADA helical filaments: structural flexibility of N-terminal domain is critical for recombinase activity Plos One, 4, 2009
|
|
2ZUD
| |
8EMH
| |
2C41
| X-ray structure of Dps from Thermosynechococcus elongatus | 分子名称: | CHLORIDE ION, DPS FAMILY DNA-BINDING STRESS RESPONSE PROTEIN, TETRAETHYLENE GLYCOL, ... | 著者 | Ilari, A, Franceschini, S, Ceci, P, Chiancone, E. | 登録日 | 2005-10-14 | 公開日 | 2006-10-11 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (1.81 Å) | 主引用文献 | Antioxidant Dps Protein from the Thermophilic Cyanobacterium Thermosynechococcus Elongatus. FEBS J., 273, 2006
|
|
5K97
| Flap endonuclease 1 (FEN1) D233N with cleaved product fragment and Sm3+ | 分子名称: | 1,2-ETHANEDIOL, DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3'), ... | 著者 | Tsutakawa, S.E, Arvai, A.S, Tainer, J.A. | 登録日 | 2016-05-31 | 公開日 | 2017-06-28 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (2.102 Å) | 主引用文献 | Phosphate steering by Flap Endonuclease 1 promotes 5'-flap specificity and incision to prevent genome instability. Nat Commun, 8, 2017
|
|
5U1C
| |
2FPL
| RadA recombinase in complex with AMP-PNP and low concentration of K+ | 分子名称: | DNA repair and recombination protein radA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | 著者 | Wu, Y, Qian, X, He, Y, Moya, I.A, Luo, Y. | 登録日 | 2006-01-16 | 公開日 | 2006-01-31 | 最終更新日 | 2023-08-30 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal Structure of Methanococcus Voltae Rada in Complex with Adp: hydrolysis-induced conformational change Biochemistry, 44, 2005
|
|
2FPM
| RadA recombinase in complex with AMP-PNP and high concentration of K+ | 分子名称: | DNA repair and recombination protein radA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | 著者 | Wu, Y, Qian, X, He, Y, Moya, I.A, Luo, Y. | 登録日 | 2006-01-16 | 公開日 | 2006-01-31 | 最終更新日 | 2023-08-30 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal Structure of Methanoccocus Voltae Rada in Complex with Adp: hydrolysis-induced conformational change Biochemistry, 44, 2005
|
|
4KOE
| Quinolone(Trovafloxacin)-DNA cleavage complex of type IV topoisomerase from S. pneumoniae | 分子名称: | DNA topoisomerase 4 subunit A, DNA topoisomerase 4 subunit B, E-site DNA1, ... | 著者 | Laponogov, I, Pan, X.-S, Veselkov, D.A, Fisher, L.M, Sanderson, M.R. | 登録日 | 2013-05-11 | 公開日 | 2014-11-26 | 最終更新日 | 2017-11-15 | 実験手法 | X-RAY DIFFRACTION (3.02 Å) | 主引用文献 | Inhibitor-stabilised cleavage complexes of topoisomerase IIa: structural analysis of drug-dependent inter- and intramolecular interactions To be Published
|
|
6UPL
| Structure of FACT_subnucleosome complex 2 | 分子名称: | DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ... | 著者 | Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K. | 登録日 | 2019-10-17 | 公開日 | 2019-12-11 | 最終更新日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (7.4 Å) | 主引用文献 | FACT caught in the act of manipulating the nucleosome. Nature, 577, 2020
|
|
6UPK
| Structure of FACT_subnucleosome complex 1 | 分子名称: | DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ... | 著者 | Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K. | 登録日 | 2019-10-17 | 公開日 | 2019-12-11 | 最終更新日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (4.9 Å) | 主引用文献 | FACT caught in the act of manipulating the nucleosome. Nature, 577, 2020
|
|
4Q48
| |
6VOY
| Cryo-EM structure of HTLV-1 instasome | 分子名称: | DNA (25-MER), DNA (5'-D(P*AP*CP*AP*CP*AP*CP*TP*TP*GP*AP*CP*TP*AP*GP*GP*GP*TP*G)-3'), DNA-binding protein 7d, ... | 著者 | Bhatt, V, Shi, K, Sundborger, A, Aihara, H. | 登録日 | 2020-02-01 | 公開日 | 2020-07-01 | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | 主引用文献 | Structural basis of host protein hijacking in human T-cell leukemia virus integration. Nat Commun, 11, 2020
|
|
8RBZ
| Structure of Integrator-PP2A-SOSS-CTD post-termination complex | 分子名称: | DNA-directed RNA polymerase subunit, DSS1, Integrator complex subunit 1, ... | 著者 | Fianu, I, Ochmann, M, Walshe, J.L, Cramer, P. | 登録日 | 2023-12-05 | 公開日 | 2024-02-07 | 最終更新日 | 2024-05-15 | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | 主引用文献 | Structural basis of Integrator-dependent RNA polymerase II termination. Nature, 629, 2024
|
|
5ZU1
| Crystal Structure of BZ junction in diverse sequence | 分子名称: | DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*AP*GP*GP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*CP*TP*TP*AP*AP*AP*CP*C)-3'), Double-stranded RNA-specific adenosine deaminase | 著者 | Kim, K.K, Kim, D. | 登録日 | 2018-05-05 | 公開日 | 2018-08-29 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (3.009 Å) | 主引用文献 | Sequence preference and structural heterogeneity of BZ junctions. Nucleic Acids Res., 46, 2018
|
|
6RYR
| Nucleosome-CHD4 complex structure (single CHD4 copy) | 分子名称: | Chromodomain-helicase-DNA-binding protein 4,Chromodomain-helicase-DNA-binding protein 4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ... | 著者 | Farnung, L, Ochmann, M, Cramer, P. | 登録日 | 2019-06-11 | 公開日 | 2020-07-15 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations. Elife, 9, 2020
|
|