Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5FJ8
DownloadVisualize
BU of 5fj8 by Molmil
Cryo-EM structure of yeast RNA polymerase III elongation complex at 3. 9 A
分子名称: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2, ...
著者Hoffmann, N.A, Jakobi, A.J, Moreno-Morcillo, M, Glatt, S, Kosinski, J, Hagen, W.J, Sachse, C, Muller, C.W.
登録日2015-10-06
公開日2015-11-25
最終更新日2017-08-30
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Molecular Structures of Unbound and Transcribing RNA Polymerase III.
Nature, 528, 2015
5VO8
DownloadVisualize
BU of 5vo8 by Molmil
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter
分子名称: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*CP*TP*GP*AP*TP*GP*CP*AP*CP*C)-3'), DNA (5'-D(P*GP*GP*TP*GP*CP*AP*TP*CP*AP*GP*AP*GP*CP*CP*CP*AP*AP*AP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Murakami, K.S, Shin, Y, Turnbough Jr, C.L, Molodtsov, V.
登録日2017-05-02
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献X-ray crystal structure of a reiterative transcription complex reveals an atypical RNA extension pathway.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4F43
DownloadVisualize
BU of 4f43 by Molmil
Protelomerase TelA mutant R255A complexed with CAAG hairpin DNA
分子名称: DNA hairpin, Protelomerase
著者Shi, K, Aihara, H.
登録日2012-05-10
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.354 Å)
主引用文献Linear Chromosome-generating System of Agrobacterium tumefaciens C58: PROTELOMERASE GENERATES AND PROTECTS HAIRPIN ENDS.
J.Biol.Chem., 287, 2012
4F41
DownloadVisualize
BU of 4f41 by Molmil
Protelomerase TelA mutant R255A complexed with CTTG hairpin DNA
分子名称: DNA hairpin, Protelomerase
著者Shi, K, Aihara, H.
登録日2012-05-09
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Linear Chromosome-generating System of Agrobacterium tumefaciens C58: PROTELOMERASE GENERATES AND PROTECTS HAIRPIN ENDS.
J.Biol.Chem., 287, 2012
6YMV
DownloadVisualize
BU of 6ymv by Molmil
Cryo-EM structure of yeast mitochondrial RNA polymerase partially-melted transcription initiation complex (PmIC)
分子名称: DNA (33-MER) NON-TEMPLATE, DNA (33-MER) template, DNA-directed RNA polymerase, ...
著者Das, K, Patel, S.S.
登録日2020-04-10
公開日2020-12-02
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM Structures Reveal Transcription Initiation Steps by Yeast Mitochondrial RNA Polymerase.
Mol.Cell, 81, 2021
7MKP
DownloadVisualize
BU of 7mkp by Molmil
Escherichia coli RNA polymerase core enzyme
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Qayyum, M.Z, Murakami, K.S.
登録日2021-04-26
公開日2021-06-23
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Structural basis of RNA polymerase recycling by the Swi2/Snf2 family of ATPase RapA in Escherichia coli.
J.Biol.Chem., 297, 2021
5FLM
DownloadVisualize
BU of 5flm by Molmil
Structure of transcribing mammalian RNA polymerase II
分子名称: DNA, DNA-RNA ELONGATION SCAFFOLD, DNA-DIRECTED RNA POLYMERASE, ...
著者Bernecky, C, Herzog, F, Baumeister, W, Plitzko, J.M, Cramer, P.
登録日2015-10-26
公開日2016-01-20
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of Transcribing Mammalian RNA Polymerase II
Nature, 529, 2016
5EZK
DownloadVisualize
BU of 5ezk by Molmil
RNA polymerase model placed by Molecular replacement into X-ray diffraction map of DNA-bound RNA Polymerase-Sigma 54 holoenzyme complex.
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Darbari, V.C, Yang, Y, Lu, D, Zhang, N, Glyde, R, Wang, Y, Murakami, K.S, Buck, M, Zhang, X.
登録日2015-11-26
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (8.5 Å)
主引用文献TRANSCRIPTION. Structures of the RNA polymerase- Sigma 54 reveal new and conserved regulatory strategies.
Science, 349, 2015
7FJI
DownloadVisualize
BU of 7fji by Molmil
human Pol III elongation complex
分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
著者Hou, H, Xu, Y.
登録日2021-08-04
公開日2021-10-27
最終更新日2021-11-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural insights into RNA polymerase III-mediated transcription termination through trapping poly-deoxythymidine.
Nat Commun, 12, 2021
7FJJ
DownloadVisualize
BU of 7fjj by Molmil
human Pol III pre-termination complex
分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
著者Hou, H, Xu, Y.
登録日2021-08-04
公開日2021-10-27
最終更新日2021-11-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural insights into RNA polymerase III-mediated transcription termination through trapping poly-deoxythymidine.
Nat Commun, 12, 2021
4C3J
DownloadVisualize
BU of 4c3j by Molmil
Structure of 14-subunit RNA polymerase I at 3.35 A resolution, crystal form C2-90
分子名称: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, ...
著者Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W.
登録日2013-08-24
公開日2013-10-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Crystal Structure of the 14-Subunit RNA Polymerase I
Nature, 502, 2013
6C6S
DownloadVisualize
BU of 6c6s by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound with RfaH
分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Artsimovitch, I, Landick, R, Darst, S.A.
登録日2018-01-19
公開日2018-07-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators.
Cell, 173, 2018
8PH9
DownloadVisualize
BU of 8ph9 by Molmil
E. coli RNA polymerase paused at ops site (non-complementary scaffold)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-19
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
7EH2
DownloadVisualize
BU of 7eh2 by Molmil
Thermus thermophilus transcription initiation complex containing a template-strand pyrimidine at position TSS-2 and GpG RNA primer
分子名称: DNA (27-MER), DNA (5'-D(*CP*C*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*AP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Li, L, Zhang, Y.
登録日2021-03-27
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献Promoter-sequence determinants and structural basis of primer-dependent transcription initiation in Escherichia coli .
Proc.Natl.Acad.Sci.USA, 118, 2021
6C6T
DownloadVisualize
BU of 6c6t by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound with RfaH
分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Kang, J.Y, Artsimovitch, I, Landick, R, Darst, S.A.
登録日2018-01-19
公開日2018-07-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators.
Cell, 173, 2018
6C6U
DownloadVisualize
BU of 6c6u by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound with NusG
分子名称: DNA (29-MER), DNA-DIRECTED RNA POLYMERASE BETA', DNA-directed RNA polymerase subunit alpha, ...
著者Kang, J.Y, Artsimovitch, I, Landick, R, Darst, S.A.
登録日2018-01-19
公開日2018-07-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators.
Cell, 173, 2018
8PDY
DownloadVisualize
BU of 8pdy by Molmil
E. coli RNA polymerase paused at ops site
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-13
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8WJO
DownloadVisualize
BU of 8wjo by Molmil
Cryo-EM structure of 8-subunit Smc5/6 arm region
分子名称: DNA repair protein KRE29, E3 SUMO-protein ligase MMS21, Structural maintenance of chromosomes protein 5, ...
著者Li, Q, Zhang, J, Zhang, X, Cheng, T, Wang, Z, Jin, D, Chen, Z, Wang, L.
登録日2023-09-26
公開日2024-06-26
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (6.04 Å)
主引用文献Cryo-EM structures of Smc5/6 in multiple states reveal its assembly and functional mechanisms.
Nat.Struct.Mol.Biol., 2024
6A5P
DownloadVisualize
BU of 6a5p by Molmil
RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome
分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
著者Kujirai, T, Ehara, H, Fujino, Y, Shirouzu, M, Sekine, S, Kurumizaka, H.
登録日2018-06-25
公開日2018-10-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural basis of the nucleosome transition during RNA polymerase II passage.
Science, 362, 2018
6A5O
DownloadVisualize
BU of 6a5o by Molmil
RNA polymerase II elongation complex stalled at SHL(-6) of the nucleosome
分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
著者Kujirai, T, Ehara, H, Fujino, Y, Shirouzu, M, Sekine, S, Kurumizaka, H.
登録日2018-06-25
公開日2018-10-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (9.9 Å)
主引用文献Structural basis of the nucleosome transition during RNA polymerase II passage.
Science, 362, 2018
8W8N
DownloadVisualize
BU of 8w8n by Molmil
Thermus thermophilus initiation transcription complex in the pre-translocated state
分子名称: DNA (21-MER), DNA (27-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Li, L, Zhang, Y.
登録日2023-09-04
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.693 Å)
主引用文献Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase.
Proc.Natl.Acad.Sci.USA, 121, 2024
8W8O
DownloadVisualize
BU of 8w8o by Molmil
Thermus thermophilus initiation complex in the half-translocated state
分子名称: DNA (21-MER), DNA (27-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Li, L, Zhang, Y.
登録日2023-09-04
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.512 Å)
主引用文献Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase.
Proc.Natl.Acad.Sci.USA, 121, 2024
7PKS
DownloadVisualize
BU of 7pks by Molmil
Structural basis of Integrator-mediated transcription regulation
分子名称: DNA Template, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Fianu, I, Chen, Y, Dienemann, C, Cramer, P.
登録日2021-08-26
公開日2021-12-08
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of Integrator-mediated transcription regulation.
Science, 374, 2021
7VBC
DownloadVisualize
BU of 7vbc by Molmil
Back track state of human RNA Polymerase I Elongation Complex
分子名称: DNA (5'-D(*GP*TP*AP*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*G)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*AP*GP*CP*GP*TP*GP*TP*CP*AP*GP*CP*AP*AP*TP*A)-3'), DNA-directed RNA polymerase I subunit RPA1, ...
著者Zhao, D, Liu, W, Chen, K, Yang, H, Xu, Y.
登録日2021-08-31
公開日2022-02-16
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Structure of the human RNA polymerase I elongation complex.
Cell Discov, 7, 2021
7VBB
DownloadVisualize
BU of 7vbb by Molmil
Structure of the post state human RNA Polymerase I Elongation Complex
分子名称: DNA (25-MER), DNA (5'-D(*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*CP*GP*A)-3'), DNA-directed RNA polymerase I subunit RPA1, ...
著者Zhao, D, Liu, W, Chen, K, Yang, H, Xu, Y.
登録日2021-08-31
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Structure of the human RNA polymerase I elongation complex.
Cell Discov, 7, 2021

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon