8ERM
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![BU of 8erm by Molmil](/molmil-images/mine/8erm) | Crystal structure of FliC D2/D3 domains from Pseudomonas aeruginosa PAO1 | 分子名称: | B-type flagellin, GLYCEROL, SULFATE ION | 著者 | Nedeljkovic, M, Bonsor, D.A, Postel, S, Sundberg, E.J. | 登録日 | 2022-10-12 | 公開日 | 2023-05-17 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.475 Å) | 主引用文献 | An unbroken network of interactions connecting flagellin domains is required for motility in viscous environments. Plos Pathog., 19, 2023
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7RQ6
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![BU of 7rq6 by Molmil](/molmil-images/mine/7rq6) | Cryo-EM structure of SARS-CoV-2 spike in complex with non-neutralizing NTD-directed CV3-13 Fab isolated from convalescent individual | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CV3-13 Fab heavy chain, ... | 著者 | Chen, Y, Pozharski, E, Tolbert, W.D, Pazgier, M. | 登録日 | 2021-08-05 | 公開日 | 2022-04-20 | 最終更新日 | 2023-08-09 | 実験手法 | ELECTRON MICROSCOPY (4.18 Å) | 主引用文献 | A Fc-enhanced NTD-binding non-neutralizing antibody delays virus spread and synergizes with a nAb to protect mice from lethal SARS-CoV-2 infection. Cell Rep, 38, 2022
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8F0G
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![BU of 8f0g by Molmil](/molmil-images/mine/8f0g) | Structure of SARS-CoV-2 Omicron BA.1 spike in complex with antibody Fab 1C3 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody 1C3 Fab Heavy Chain, ... | 著者 | Yu, X, Zyla, D, Hastie, K.M, Saphire, E.O. | 登録日 | 2022-11-02 | 公開日 | 2023-05-03 | 実験手法 | ELECTRON MICROSCOPY (3.35 Å) | 主引用文献 | Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence. Cell Rep, 42, 2023
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8F0H
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![BU of 8f0h by Molmil](/molmil-images/mine/8f0h) | Structure of SARS-CoV-2 spike with antibody Fabs 2A10 and 1H2 (Local refinement of the RBD and Fabs 1H2 and 2A10) | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab 1H2 heavy chain, Antibody Fab 1H2 light chain, ... | 著者 | Yu, X, Zyla, D, Hastie, K.M, Saphire, E.O. | 登録日 | 2022-11-02 | 公開日 | 2023-05-03 | 実験手法 | ELECTRON MICROSCOPY (3.18 Å) | 主引用文献 | Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence. Cell Rep, 42, 2023
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7RM6
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![BU of 7rm6 by Molmil](/molmil-images/mine/7rm6) | |
1H8G
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![BU of 1h8g by Molmil](/molmil-images/mine/1h8g) | C-terminal domain of the major autolysin (C-LytA) from Streptococcus pneumoniae | 分子名称: | CHOLINE ION, MAJOR AUTOLYSIN | 著者 | Fernandez-Tornero, C, Garcia, E, Lopez, R, Gimenez-Gallego, G, Romero, A. | 登録日 | 2001-02-06 | 公開日 | 2002-01-31 | 最終更新日 | 2019-07-24 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | A Novel Solenoid Fold in the Cell Wall Anchoring Domain of the Pneumococcal Virulence Factor Lyta Nat.Struct.Biol., 8, 2001
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7OZS
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![BU of 7ozs by Molmil](/molmil-images/mine/7ozs) | Structure of the hexameric 5S RNP from C. thermophilum | 分子名称: | 5S rRNA, 60S ribosomal protein l5-like protein, Putative ribosomal protein, ... | 著者 | Castillo, N, Thoms, M, Flemming, D, Hammaren, H.M, Buschauer, R, Ameismeier, M, Bassler, J, Beck, M, Beckmann, R, Hurt, E. | 登録日 | 2021-06-28 | 公開日 | 2022-10-12 | 最終更新日 | 2024-07-17 | 実験手法 | ELECTRON MICROSCOPY (3.5 Å) | 主引用文献 | Structure of nascent 5S RNPs at the crossroad between ribosome assembly and MDM2-p53 pathways. Nat.Struct.Mol.Biol., 2023
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8J9R
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![BU of 8j9r by Molmil](/molmil-images/mine/8j9r) | |
6NB7
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![BU of 6nb7 by Molmil](/molmil-images/mine/6nb7) | SARS-CoV complex with human neutralizing S230 antibody Fab fragment (state 2) | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, S230 heavy chain, ... | 著者 | Walls, A.C, Xiong, X, Park, Y.J, Tortorici, M.A, Snijder, S, Quispe, J, Cameroni, E, Gopal, R, Mian, D, Lanzavecchia, A, Zambon, M, Rey, F.A, Corti, D, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 登録日 | 2018-12-06 | 公開日 | 2019-02-06 | 最終更新日 | 2020-07-29 | 実験手法 | ELECTRON MICROSCOPY (4.5 Å) | 主引用文献 | Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion. Cell, 176, 2019
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6QK4
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![BU of 6qk4 by Molmil](/molmil-images/mine/6qk4) | Lytic transglycosylase, LtgG, of Burkholderia pseudomallei. | 分子名称: | Membrane-bound lytic murein transglycosylase A | 著者 | Jenkins, C.H, Wallis, R, Allcock, N, Barnes, K.B, Richards, M.I, Auty, J.M, Galyov, E.E, Harding, S.V, Mukamolova, G.V. | 登録日 | 2019-01-28 | 公開日 | 2019-08-14 | 最終更新日 | 2024-01-24 | 実験手法 | X-RAY DIFFRACTION (1.73 Å) | 主引用文献 | The lytic transglycosylase, LtgG, controls cell morphology and virulence in Burkholderia pseudomallei. Sci Rep, 9, 2019
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5EF0
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![BU of 5ef0 by Molmil](/molmil-images/mine/5ef0) | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 16.7 MGy | 分子名称: | (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB | 著者 | Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B. | 登録日 | 2015-10-23 | 公開日 | 2016-05-04 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | 主引用文献 | RNA protects a nucleoprotein complex against radiation damage. Acta Crystallogr D Struct Biol, 72, 2016
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6FPW
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![BU of 6fpw by Molmil](/molmil-images/mine/6fpw) | Structure of fully reduced Hydrogenase (Hyd-1) | 分子名称: | CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, FE3-S4 CLUSTER, ... | 著者 | Carr, S.B, Armstrong, F.A, Evans, R.M. | 登録日 | 2018-02-12 | 公開日 | 2019-02-27 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | 主引用文献 | Mechanistic Exploitation of a Self-Repairing, Blocked Proton Transfer Pathway in an O2-Tolerant [NiFe]-Hydrogenase. J. Am. Chem. Soc., 140, 2018
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6G95
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![BU of 6g95 by Molmil](/molmil-images/mine/6g95) | Crystal structure of Ebolavirus glycoprotein in complex with thioridazine | 分子名称: | 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ... | 著者 | Zhao, Y, Ren, J, Fry, E.E, Xiao, J, Townsend, A.R, Stuart, D.I. | 登録日 | 2018-04-10 | 公開日 | 2018-05-23 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.31 Å) | 主引用文献 | Structures of Ebola Virus Glycoprotein Complexes with Tricyclic Antidepressant and Antipsychotic Drugs. J. Med. Chem., 61, 2018
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6NES
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![BU of 6nes by Molmil](/molmil-images/mine/6nes) | FAD-dependent monooxygenase TropB from T. stipitatus | 分子名称: | CHLORIDE ION, FAD-dependent monooxygenase tropB, FLAVIN-ADENINE DINUCLEOTIDE, ... | 著者 | Rodriguez Benitez, A, Tweedy, S.E, Baker Dockrey, S.A, Lukowski, A.L, Wymore, T, Khare, D, Brooks, C.L, Palfey, B.A, Smith, J.L, Narayan, A.R.H. | 登録日 | 2018-12-18 | 公開日 | 2019-08-14 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Structural basis for selectivity in flavin-dependent monooxygenase-catalyzed oxidative dearomatization. Acs Catalysis, 9, 2019
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8E1G
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![BU of 8e1g by Molmil](/molmil-images/mine/8e1g) | SARS-CoV-2 RBD in complex with Omicron-neutralizing antibody 2A10 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2A10 Fab, heavy chain, ... | 著者 | Wasserman, H, Hastie, K.M, Buck, T.K, Saphire, E.O. | 登録日 | 2022-08-10 | 公開日 | 2023-06-28 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.57 Å) | 主引用文献 | Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence. Cell Rep, 42, 2023
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8EF7
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![BU of 8ef7 by Molmil](/molmil-images/mine/8ef7) | CryoEM of the soluble OPA1 dimer from the apo helical assembly on a lipid membrane | 分子名称: | Dynamin-like 120 kDa protein, form S1 | 著者 | Nyenhuis, S.B, Wu, X, Stanton, A.E, Strub, M.P, Yim, Y.I, Canagarajah, B, Hinshaw, J.E. | 登録日 | 2022-09-08 | 公開日 | 2023-06-28 | 最終更新日 | 2023-09-13 | 実験手法 | ELECTRON MICROSCOPY (9.68 Å) | 主引用文献 | OPA1 helical structures give perspective to mitochondrial dysfunction. Nature, 620, 2023
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6TAO
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![BU of 6tao by Molmil](/molmil-images/mine/6tao) | The cytotoxin MakE from Vibrio cholerae | 分子名称: | NICKEL (II) ION, Non-hemolytic enterotoxin lytic component L1, SULFATE ION | 著者 | Persson, K, Nagampalli, R, Heidler, T, Wai, S.N. | 登録日 | 2019-10-30 | 公開日 | 2020-11-18 | 最終更新日 | 2024-06-19 | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | 主引用文献 | A tripartite cytolytic toxin formed by Vibrio cholerae proteins with flagellum-facilitated secretion. Proc.Natl.Acad.Sci.USA, 118, 2021
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5KTO
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![BU of 5kto by Molmil](/molmil-images/mine/5kto) | Crystal structure of Pyrococcus horikoshii quinolinate synthase (NadA) with bound quinolinate and Fe4S4 cluster | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, IRON/SULFUR CLUSTER, ... | 著者 | Fenwick, M.K, Ealick, S.E. | 登録日 | 2016-07-12 | 公開日 | 2016-07-27 | 最終更新日 | 2023-10-04 | 実験手法 | X-RAY DIFFRACTION (1.442 Å) | 主引用文献 | Crystal Structures of the Iron-Sulfur Cluster-Dependent Quinolinate Synthase in Complex with Dihydroxyacetone Phosphate, Iminoaspartate Analogues, and Quinolinate. Biochemistry, 55, 2016
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5EEV
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![BU of 5eev by Molmil](/molmil-images/mine/5eev) | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 3.88 MGy | 分子名称: | (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB | 著者 | Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B. | 登録日 | 2015-10-23 | 公開日 | 2016-05-04 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | 主引用文献 | RNA protects a nucleoprotein complex against radiation damage. Acta Crystallogr D Struct Biol, 72, 2016
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1Y3B
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![BU of 1y3b by Molmil](/molmil-images/mine/1y3b) | Crystal structure of the complex of subtilisin BPN' with chymotrypsin inhibitor 2 E60S mutant | 分子名称: | CALCIUM ION, CITRIC ACID, POLYETHYLENE GLYCOL (N=34), ... | 著者 | Radisky, E.S, Lu, C.J, Kwan, G, Koshland Jr, D.E. | 登録日 | 2004-11-24 | 公開日 | 2005-05-17 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Role of the intramolecular hydrogen bond network in the inhibitory power of chymotrypsin inhibitor 2 Biochemistry, 44, 2005
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6GFY
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![BU of 6gfy by Molmil](/molmil-images/mine/6gfy) | pVHL:EloB:EloC in complex with modified VH032 containing (3R,4S)-3-fluoro-4-hydroxyproline (ligand 14a) | 分子名称: | (2~{R},3~{R},4~{S})-1-[(2~{S})-2-acetamido-3,3-dimethyl-butanoyl]-3-fluoranyl-~{N}-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ... | 著者 | Gadd, M.S, Testa, A, Ciulli, A. | 登録日 | 2018-05-02 | 公開日 | 2018-07-11 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | 3-Fluoro-4-hydroxyprolines: Synthesis, Conformational Analysis, and Stereoselective Recognition by the VHL E3 Ubiquitin Ligase for Targeted Protein Degradation. J. Am. Chem. Soc., 140, 2018
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1Y48
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![BU of 1y48 by Molmil](/molmil-images/mine/1y48) | Crystal structure of the complex of subtilisin BPN' with chymotrypsin inhibitor 2 R65A mutant | 分子名称: | CALCIUM ION, CITRIC ACID, POLYETHYLENE GLYCOL (N=34), ... | 著者 | Radisky, E.S, Lu, C.J, Kwan, G, Koshland Jr, D.E. | 登録日 | 2004-11-30 | 公開日 | 2005-05-17 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | Role of the intramolecular hydrogen bond network in the inhibitory power of chymotrypsin inhibitor 2 Biochemistry, 44, 2005
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5EEX
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![BU of 5eex by Molmil](/molmil-images/mine/5eex) | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 9.02 MGy | 分子名称: | (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB | 著者 | Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B. | 登録日 | 2015-10-23 | 公開日 | 2016-05-04 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | 主引用文献 | RNA protects a nucleoprotein complex against radiation damage. Acta Crystallogr D Struct Biol, 72, 2016
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8CWP
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![BU of 8cwp by Molmil](/molmil-images/mine/8cwp) | X-ray crystal structure of NTHi Protein D bound to a putative glycerol moiety | 分子名称: | GLYCEROL, Glycerophosphoryl diester phosphodiesterase, SODIUM ION | 著者 | Jones, S.P, Cook, K.H, Holmquist, M.L, Almekinder, L, DeLaney, A, Labbe, N, Perdue, J, Jackson, N, Charles, R, Pichichero, M, Kaur, R, Michel, L, Gleghorn, M.L. | 登録日 | 2022-05-19 | 公開日 | 2022-09-28 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Vaccine target and carrier molecule nontypeable Haemophilus influenzae protein D dimerizes like the close Escherichia coli GlpQ homolog but unlike other known homolog dimers. Proteins, 91, 2023
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7Q4M
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![BU of 7q4m by Molmil](/molmil-images/mine/7q4m) | Type II beta-amyloid 42 Filaments from Human Brain | 分子名称: | Amyloid-beta precursor protein, UNKNOWN ATOM OR ION | 著者 | Yang, Y, Arseni, D, Zhang, W, Huang, M, Lovestam, S.K.A, Schweighauser, M, Kotecha, A, Murzin, A.G, Peak-Chew, S.Y, Macdonald, J, Lavenir, I, Garringer, H.J, Gelpi, E, Newell, K.L, Kovacs, G.G, Vidal, R, Ghetti, B, Falcon, B, Scheres, S.H.W, Goedert, M. | 登録日 | 2021-11-01 | 公開日 | 2021-11-24 | 最終更新日 | 2024-07-17 | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | 主引用文献 | Cryo-EM structures of amyloid-beta 42 filaments from human brains. Science, 375, 2022
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