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3B6I
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WrbA from Escherichia coli, native structure
分子名称: FLAVIN MONONUCLEOTIDE, Flavoprotein wrbA, POLYETHYLENE GLYCOL (N=34)
著者Andrade, S.L.A, Patridge, E.V, Ferry, J.G, Einsle, O.
登録日2007-10-29
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Crystal structure of the NADH:quinone oxidoreductase WrbA from Escherichia coli.
J.Bacteriol., 189, 2007
1B0F
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BU of 1b0f by Molmil
CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL ELASTASE WITH MDL 101, 146
分子名称: 1-{3-METHYL-2-[4-(MORPHOLINE-4-CARBONYL)-BENZOYLAMINO]-BUTYRYL}-PYRROLIDINE-2-CARBOXYLIC ACID (3,3,4,4,4-PENTAFLUORO-1-ISOPROPYL-2-OXO-BUTYL)-AMIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (ELASTASE)
著者Schreuder, H.A, Metz, W.A, Peet, N.P, Pelton, J.T, Tardif, C.
登録日1998-11-09
公開日1998-11-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Inhibition of human neutrophil elastase. 4. Design, synthesis, X-ray crystallographic analysis, and structure-activity relationships for a series of P2-modified, orally active peptidyl pentafluoroethyl ketones.
J.Med.Chem., 41, 1998
3B6K
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WrbA from Escherichia coli, Benzoquinone complex
分子名称: 1,4-benzoquinone, FLAVIN MONONUCLEOTIDE, Flavoprotein wrbA, ...
著者Andrade, S.L.A, Patridge, E.V, Ferry, J.G, Einsle, O.
登録日2007-10-29
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of the NADH:quinone oxidoreductase WrbA from Escherichia coli.
J.Bacteriol., 189, 2007
7LS2
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BU of 7ls2 by Molmil
80S ribosome from mouse bound to eEF2 (Class I)
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Loerch, S, Smith, P.R, Kunder, N, Stanowick, A.D, Lou, T.-F, Campbell, Z.T.
登録日2021-02-17
公開日2021-11-03
最終更新日2021-12-08
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance.
Nat Commun, 12, 2021
7LS1
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BU of 7ls1 by Molmil
80S ribosome from mouse bound to eEF2 (Class II)
分子名称: 28S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Loerch, S, Smith, P.R, Kunder, N, Stanowick, A.D, Lou, T.-F, Campbell, Z.T.
登録日2021-02-17
公開日2021-11-03
最終更新日2021-12-08
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance.
Nat Commun, 12, 2021
3B6J
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BU of 3b6j by Molmil
WrbA from Escherichia coli, NADH complex
分子名称: ADENOSINE MONOPHOSPHATE, FLAVIN MONONUCLEOTIDE, Flavoprotein wrbA, ...
著者Andrade, S.L.A, Patridge, E.V, Ferry, J.G, Einsle, O.
登録日2007-10-29
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of the NADH:quinone oxidoreductase WrbA from Escherichia coli.
J.Bacteriol., 189, 2007
5NVK
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BU of 5nvk by Molmil
Crystal structure of the human 4EHP-GIGYF1 complex
分子名称: Eukaryotic translation initiation factor 4E type 2, GRB10-interacting GYF protein 1
著者Peter, D, Valkov, E.
登録日2017-05-04
公開日2017-07-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献GIGYF1/2 proteins use auxiliary sequences to selectively bind to 4EHP and repress target mRNA expression.
Genes Dev., 31, 2017
7QFZ
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BrxR, a WYL-domain containing transcriptional regulator
分子名称: SULFATE ION, WYL domain-containing protein
著者Picton, D.M, Blower, T.R.
登録日2021-12-07
公開日2022-05-18
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A widespread family of WYL-domain transcriptional regulators co-localizes with diverse phage defence systems and islands.
Nucleic Acids Res., 50, 2022
1UNA
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BU of 1una by Molmil
UNASSEMBLED VIRUS COAT PROTEIN DIMER, BACTERIOPHAGE RNA-BINDING DIMER
分子名称: GA UNASSEMBLED COAT PROTEIN DIMER
著者Ni, C.-Z, Ely, K.R.
登録日1996-04-25
公開日1996-11-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the coat protein from the GA bacteriophage: model of the unassembled dimer.
Protein Sci., 5, 1996
7SMD
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BU of 7smd by Molmil
p107 pocket domain complexed with EID1 peptide
分子名称: EP300-interacting inhibitor of differentiation 1, Retinoblastoma-like protein 1, SULFATE ION
著者Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
登録日2021-10-25
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
7SME
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BU of 7sme by Molmil
p107 pocket domain complexed with HDAC1 peptide
分子名称: Histone deacetylase 1, Retinoblastoma-like protein 1, SULFATE ION
著者Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
登録日2021-10-25
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
7SMF
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BU of 7smf by Molmil
p107 pocket domain complexed with mutated HDAC1-3X peptide
分子名称: Histone deacetylase 1, Retinoblastoma-like protein 1, SULFATE ION
著者Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
登録日2021-10-25
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
7SMC
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BU of 7smc by Molmil
p107 pocket domain complexed with ARID4A peptide
分子名称: AT-rich interactive domain-containing protein 4A, Retinoblastoma-like protein 1, SULFATE ION
著者Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
登録日2021-10-25
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
7VPD
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BU of 7vpd by Molmil
Cryo-EM structure of Streptomyces coelicolor RNAP-promoter open complex with one Zur dimers
分子名称: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Yang, X, Zheng, J.
登録日2021-10-15
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VO0
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BU of 7vo0 by Molmil
Streptomyces coelicolor zinc uptake regulator complexed with zinc and DNA (trimer of dimers)
分子名称: DNA_NT (84-MER), DNA_T (84-MER), Putative metal uptake regulation protein, ...
著者Yang, X, Zheng, J.
登録日2021-10-12
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VO9
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BU of 7vo9 by Molmil
Streptomyces coelicolor zinc uptake regulator complexed with zinc and DNA (dimer of dimers)
分子名称: DNA (84-MER), Putative metal uptake regulation protein, ZINC ION
著者Yang, X, Zheng, J.
登録日2021-10-13
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VPZ
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Cryo-EM structure of Streptomyces coelicolor transcription initial complex with one Zur dimer
分子名称: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Yang, X, Zheng, J.
登録日2021-10-18
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.14 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
4IEM
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BU of 4iem by Molmil
Human apurinic/apyrimidinic endonuclease (APE1) with product DNA and Mg2+
分子名称: DNA (5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*C)-3'), DNA (5'-D(P*(3DR)P*GP*AP*TP*CP*G)-3'), ...
著者Tsutakawa, S.E, Mol, C.D, Arvai, A.S, Tainer, J.A.
登録日2012-12-13
公開日2013-01-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3936 Å)
主引用文献Conserved Structural Chemistry for Incision Activity in Structurally Non-homologous Apurinic/Apyrimidinic Endonuclease APE1 and Endonuclease IV DNA Repair Enzymes.
J.Biol.Chem., 288, 2013
6Q27
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BU of 6q27 by Molmil
N-acetylmannosamine kinase with N-acetylmannosamine from Staphylococcus aureus
分子名称: 2-acetamido-2-deoxy-alpha-D-mannopyranose, Glucokinase
著者Coombes, D, Horne, C.R, Davies, J.S, Dobson, R.C.J.
登録日2019-08-07
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The basis for non-canonical ROK family function in theN-acetylmannosamine kinase from the pathogenStaphylococcus aureus.
J.Biol.Chem., 295, 2020
3KP2
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BU of 3kp2 by Molmil
Staphylococcus epidermidis TcaR in complex with penicillin G
分子名称: CACODYLATE ION, PENICILLIN G, Transcriptional regulator TcaR
著者Chang, Y.M, Chen, C.K, Wang, A.H.
登録日2009-11-15
公開日2010-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural study of TcaR and its complexes with multiple antibiotics from Staphylococcus epidermidis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KP7
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BU of 3kp7 by Molmil
Staphylococcus epidermidis TcaR (apo form)
分子名称: Transcriptional regulator TcaR
著者Chang, Y.M, Chen, C.K, Yeh, Y.J, Ko, T.P, Wang, A.H.
登録日2009-11-15
公開日2010-06-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural study of TcaR and its complexes with multiple antibiotics from Staphylococcus epidermidis.
Proc.Natl.Acad.Sci.USA, 107, 2010
6Q28
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BU of 6q28 by Molmil
Metal ROK rebel: Characterisation of N-acetylmannosamine kinase from the pathogen Staphylococcus aureus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetylmannosamine kinase
著者Coombes, D, Horne, C.R, Dobson, R.C.J.
登録日2019-08-07
公開日2020-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The basis for non-canonical ROK family function in theN-acetylmannosamine kinase from the pathogenStaphylococcus aureus.
J.Biol.Chem., 295, 2020
3KP5
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BU of 3kp5 by Molmil
Staphylococcus epidermidis TcaR in complex with kanamycin
分子名称: KANAMYCIN A, Transcriptional regulator TcaR
著者Chang, Y.M, Chen, C.K, Wang, A.H.
登録日2009-11-15
公開日2010-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural study of TcaR and its complexes with multiple antibiotics from Staphylococcus epidermidis.
Proc.Natl.Acad.Sci.USA, 107, 2010
6QYQ
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Crystal structure of human thymidylate synthase (hTS) variant R175C
分子名称: CHLORIDE ION, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ...
著者Pozzi, C, Mangani, M.
登録日2019-03-09
公開日2019-04-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and Functional Characterization of the Human Thymidylate Synthase (hTS) Interface Variant R175C, New Perspectives for the Development of hTS Inhibitors.
Molecules, 24, 2019
3KP4
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Staphylococcus epidermidis TcaR in complex with methicillin
分子名称: Transcriptional regulator TcaR, methicillin
著者Chang, Y.M, Chen, C.K, Wang, A.H.
登録日2009-11-15
公開日2010-06-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Structural study of TcaR and its complexes with multiple antibiotics from Staphylococcus epidermidis.
Proc.Natl.Acad.Sci.USA, 107, 2010

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