Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6PMJ
DownloadVisualize
BU of 6pmj by Molmil
Sigm28-transcription initiation complex with specific promoter at the state 2
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Liu, B, Shi, W.
登録日2019-07-02
公開日2020-05-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献Structural basis of bacterial sigma28-mediated transcription reveals roles of the RNA polymerase zinc-binding domain.
Embo J., 39, 2020
7ANT
DownloadVisualize
BU of 7ant by Molmil
Structure of CYP153A from Polaromonas sp.
分子名称: 1,2-ETHANEDIOL, Cytochrome P450, HEME C
著者Zukic, E, Rowlinson, B, Sharma, M, Hoffman, S, Hauer, B, Grogan, G.
登録日2020-10-12
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Substrate Anchoring and Flexibility Reduction in CYP153AM.aq Leads to Highly Improved Efficiency toward Octanoic Acid
Acs Catalysis, 11, 2021
7ZLR
DownloadVisualize
BU of 7zlr by Molmil
Crystal structure of SOCS2:ElonginB:ElonginC in complex with compound 13
分子名称: Elongin-B, Elongin-C, Suppressor of cytokine signaling 2, ...
著者Ramachandran, S, Ciulli, A, Makukhin, N.
登録日2022-04-15
公開日2023-04-26
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure-based design of a phosphotyrosine-masked covalent ligand targeting the E3 ligase SOCS2.
Nat Commun, 14, 2023
4X5Q
DownloadVisualize
BU of 4x5q by Molmil
Crystal structure of FimH in complex with 5-nitro-indolinylphenyl alpha-D-mannopyranoside
分子名称: 4-(5-nitro-1H-indol-1-yl)phenyl alpha-D-mannopyranoside, Protein FimH
著者Preston, R.C, Jakob, R.P, Fiege, B, Zihlmann, P, Rabbani, S, Schwardt, O, Jiang, X, Ernst, B, Maier, T.
登録日2014-12-05
公開日2015-05-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献The Tyrosine Gate of the Bacterial Lectin FimH: A Conformational Analysis by NMR Spectroscopy and X-ray Crystallography.
Chembiochem, 16, 2015
6SOF
DownloadVisualize
BU of 6sof by Molmil
human insulin receptor ectodomain bound by 4 insulin
分子名称: Insulin, Insulin receptor
著者Gutmann, T, Schaefer, I.B, Poojari, C.S, Vattulainen, I, Strauss, M, Coskun, U.
登録日2019-08-29
公開日2019-11-13
最終更新日2020-05-27
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-EM structure of the complete and ligand-saturated insulin receptor ectodomain.
J.Cell Biol., 219, 2020
7AO7
DownloadVisualize
BU of 7ao7 by Molmil
Structure of CYP153A from Polaromonas sp. in complex with octan-1-ol
分子名称: Cytochrome P450, OCTAN-1-OL, PROTOPORPHYRIN IX CONTAINING FE
著者Zukic, E, Rowlinson, B, Sharma, M, Hoffmann, S, Hauer, B, Grogan, G.
登録日2020-10-13
公開日2021-04-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Substrate Anchoring and Flexibility Reduction in CYP153AM.aq Leads to Highly Improved Efficiency toward Octanoic Acid
Acs Catalysis, 11, 2021
7TFD
DownloadVisualize
BU of 7tfd by Molmil
P. polymyxa GS(12) - apo
分子名称: Glutamine synthetase, MAGNESIUM ION
著者Travis, B.A, Peck, J, Schumacher, M.A.
登録日2022-01-06
公開日2022-06-29
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
6MAJ
DownloadVisualize
BU of 6maj by Molmil
HBO1 is required for the maintenance of leukaemia stem cells
分子名称: 4-fluoro-N'-[(3-hydroxyphenyl)sulfonyl]-5-methyl[1,1'-biphenyl]-3-carbohydrazide, BRD1 protein, GLYCEROL, ...
著者Ren, B, Peat, T.S, Monahan, B, Dawson, M, Street, I.
登録日2018-08-27
公開日2019-12-25
最終更新日2020-01-22
実験手法X-RAY DIFFRACTION (2.139 Å)
主引用文献HBO1 is required for the maintenance of leukaemia stem cells.
Nature, 577, 2020
8PG0
DownloadVisualize
BU of 8pg0 by Molmil
Human OATP1B3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BICARBONATE ION, CHOLESTEROL, ...
著者Ciuta, A.-D, Nosol, K, Kowal, J, Mukherjee, S, Ramirez, A.S, Stieger, B, Kossiakoff, A.A, Locher, K.P.
登録日2023-06-17
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structure of human drug transporters OATP1B1 and OATP1B3.
Nat Commun, 14, 2023
6MDE
DownloadVisualize
BU of 6mde by Molmil
Mevalonate kinase from Methanosarcina mazei with mevalonate bound
分子名称: (R)-MEVALONATE, GLYCEROL, Mevalonate kinase, ...
著者Miller, B.R, Kung, Y.
登録日2018-09-04
公開日2018-12-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insight into substrate and product binding in an archaeal mevalonate kinase.
PLoS ONE, 13, 2018
4X6I
DownloadVisualize
BU of 4x6i by Molmil
Development of N-(Functionalized benzoyl)-homocycloleucyl-glycinonitriles as Potent Cathepsin K Inhibitors.
分子名称: 2-amino-4-bromo-N-{1-[(cyanomethyl)carbamoyl]cyclohexyl}benzamide, Cathepsin K, SULFATE ION
著者Borisek, J, Mohar, B, Vizovisek, M, Sosnowski, P, Turk, D, Turk, B, Novic, M.
登録日2014-12-08
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Development of N-(Functionalized benzoyl)-homocycloleucyl-glycinonitriles as Potent Cathepsin K Inhibitors.
J.Med.Chem., 58, 2015
8D4Q
DownloadVisualize
BU of 8d4q by Molmil
Crystal Structure of Neutrophil Elastase Inhibited by Eap1 from S. aureus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Extracellular Adherence Protein, Neutrophil elastase
著者Gido, C.D, Herdendorf, T.J, Geisbrecht, B.V.
登録日2022-06-02
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterization of two distinct neutrophil serine protease-binding modes within a Staphylococcus aureus innate immune evasion protein family.
J.Biol.Chem., 299, 2023
6OZZ
DownloadVisualize
BU of 6ozz by Molmil
N terminally deleted GapR crystal structure from C. crescentus
分子名称: UPF0335 protein CC_3319
著者Tarry, M, Harmel, C, Taylor, J.A, Marczynski, G.T, Schmeing, T.M.
登録日2019-05-16
公開日2019-11-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.304 Å)
主引用文献Structures of GapR reveal a central channel which could accommodate B-DNA.
Sci Rep, 9, 2019
7B14
DownloadVisualize
BU of 7b14 by Molmil
Nanobody E bound to Spike-RBD in a localized reconstruction
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody against SARS-CoV-2, Spike protein S1
著者Hallberg, B.M, Das, H.
登録日2020-11-23
公開日2021-04-28
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape
Science, 371, 2021
6MDV
DownloadVisualize
BU of 6mdv by Molmil
Crystal structure of Streptococcus pyogenes endo-beta-N-acetylglucosaminidase (EndoS2) with high-mannose glycan
分子名称: CALCIUM ION, Endo-beta-N-acetylglucosaminidase, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Klontz, E.H, Trastoy, B, Orwenyo, J, Wang, L.X, Guerin, M.E, Sundberg, E.J.
登録日2018-09-05
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular Basis of Broad SpectrumN-Glycan Specificity and Processing of Therapeutic IgG Monoclonal Antibodies by Endoglycosidase S2.
ACS Cent Sci, 5, 2019
5F19
DownloadVisualize
BU of 5f19 by Molmil
The Crystal Structure of Aspirin Acetylated Human Cyclooxygenase-2
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lucido, M.J, Orlando, B.J, Malkowski, M.G.
登録日2015-11-30
公開日2016-03-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Crystal Structure of Aspirin-Acetylated Human Cyclooxygenase-2: Insight into the Formation of Products with Reversed Stereochemistry.
Biochemistry, 55, 2016
5KLU
DownloadVisualize
BU of 5klu by Molmil
Crystal Structure of a Domain-swapped Dimer of Yeast Iso-1-cytochrome c with omega-undecylenyl-beta-D-maltopyranoside
分子名称: Cytochrome c iso-1, HEME C, SULFATE ION, ...
著者Bowler, B.E, Whitby, F.G.
登録日2016-06-25
公開日2017-03-22
最終更新日2021-03-10
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Cytochrome c Can Form a Well-Defined Binding Pocket for Hydrocarbons.
J. Am. Chem. Soc., 138, 2016
6SIU
DownloadVisualize
BU of 6siu by Molmil
Crystal structure of IbpAFic2 covalently tethered to Cdc42
分子名称: Cell division control protein 42 homolog, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
著者Gulen, B, Roselin, M, Albers, M, Hedberg, C, Itzen, A, Pogenberg, V.
登録日2019-08-12
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Identification of targets of AMPylating Fic enzymes by co-substrate-mediated covalent capture.
Nat.Chem., 12, 2020
6F5C
DownloadVisualize
BU of 6f5c by Molmil
Structure of h. salinarum RosR (vng0258) grown from NaCl
分子名称: CHLORIDE ION, HALOPHILIC WINGED-HELIX-TURN-HELIX DNA BINDING PROTEIN, SULFATE ION
著者Shaanan, B, Kutnowski, N, Shmuely, H.
登録日2017-12-01
公開日2018-08-22
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The 3-D structure of VNG0258H/RosR - A haloarchaeal DNA-binding protein in its ionic shell.
J. Struct. Biol., 204, 2018
5EVM
DownloadVisualize
BU of 5evm by Molmil
Crystal Structure of Nipah Virus Fusion Glycoprotein in the Prefusion State
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, MALONATE ION, ...
著者Xu, K, Nikolov, D.B.
登録日2015-11-20
公開日2015-12-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.367 Å)
主引用文献Crystal Structure of the Pre-fusion Nipah Virus Fusion Glycoprotein Reveals a Novel Hexamer-of-Trimers Assembly.
Plos Pathog., 11, 2015
8Q4H
DownloadVisualize
BU of 8q4h by Molmil
a membrane-bound menaquinol:organohalide oxidoreductase complex RDH complex
分子名称: (~{Z})-1,2-bis(chloranyl)ethene, CO-METHYLCOBALAMIN, IRON/SULFUR CLUSTER, ...
著者Dongchun, N, Ekundayo, B, Henning, S, Julien, M, Holliger, C, Cimmino, L.
登録日2023-08-07
公開日2023-10-18
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Structure of a membrane-bound menaquinol:organohalide oxidoreductase.
Nat Commun, 14, 2023
6P8N
DownloadVisualize
BU of 6p8n by Molmil
Crystal Structure of Antibody P-p1f1 in Complex with eOD-GT8
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, AMMONIUM ION, ...
著者Weidle, C, Pancera, M.
登録日2019-06-07
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.202 Å)
主引用文献Overcoming Steric Restrictions of VRC01 HIV-1 Neutralizing Antibodies through Immunization.
Cell Rep, 29, 2019
4WVO
DownloadVisualize
BU of 4wvo by Molmil
An engineered PYR1 mandipropamid receptor in complex with mandipropamid and HAB1
分子名称: (2S)-2-(4-chlorophenyl)-N-{2-[3-methoxy-4-(prop-2-yn-1-yloxy)phenyl]ethyl}-2-(prop-2-yn-1-yloxy)ethanamide, Abscisic acid receptor PYR1, MAGNESIUM ION, ...
著者Peterson, F.C, Volkman, B.F, Cutler, S.R.
登録日2014-11-06
公開日2015-02-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Agrochemical control of plant water use using engineered abscisic acid receptors.
Nature, 520, 2015
6P96
DownloadVisualize
BU of 6p96 by Molmil
OXA-48 carbapanemase, apo form
分子名称: Beta-lactamase, CADMIUM ION, CALCIUM ION, ...
著者Smith, C.A, Vakulenko, S.B.
登録日2019-06-10
公開日2019-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Insights into the Mechanism of Carbapenemase Activity of the OXA-48 beta-Lactamase.
Antimicrob.Agents Chemother., 63, 2019
6YIH
DownloadVisualize
BU of 6yih by Molmil
Structure of Chromosomal Passenger Complex (CPC) bound to phosphorylated Histone 3 peptide at 2.6 A.
分子名称: Baculoviral IAP repeat-containing protein 5, Borealin, Histone H3.1, ...
著者Serena, M, Elliott, P.R, Barr, F.A.
登録日2020-04-01
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Molecular basis of MKLP2-dependent Aurora B transport from chromatin to the anaphase central spindle.
J.Cell Biol., 219, 2020

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon