Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5K6V
DownloadVisualize
BU of 5k6v by Molmil
Sidekick-1 immunoglobulin domains 1-4, crystal form 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein sidekick-1, ...
著者Jin, X, Goodman, K.M, Mannepalli, S, Honig, B, Shapiro, L.
登録日2016-05-25
公開日2016-09-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.208 Å)
主引用文献Molecular basis of sidekick-mediated cell-cell adhesion and specificity.
Elife, 5, 2016
6RGX
DownloadVisualize
BU of 6rgx by Molmil
TETR(D) N82A MUTANT IN COMPLEX WITH DOXYCYCLINE AND MAGNESIUM
分子名称: (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE, CHLORIDE ION, MAGNESIUM ION, ...
著者Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
登録日2019-04-17
公開日2019-08-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
6NC2
DownloadVisualize
BU of 6nc2 by Molmil
AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody ACS202 fragment antigen binding
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AMC011 v4.2 SOSIP gp120, ...
著者Cottrell, C.A, Ozorowski, G, Yuan, M, Copps, J, Wilson, I.A, Ward, A.B.
登録日2018-12-10
公開日2019-06-19
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (5.2 Å)
主引用文献Conformational Plasticity in the HIV-1 Fusion Peptide Facilitates Recognition by Broadly Neutralizing Antibodies.
Cell Host Microbe, 25, 2019
8RNH
DownloadVisualize
BU of 8rnh by Molmil
Crystal structure of HLA B*18:01 in complex with EEIEITTHF, an 9-mer epitope from Influenza A
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
著者Murdolo, L.D, Maddumaage, J, Gras, S.
登録日2024-01-10
公開日2024-05-08
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Characterisation of novel influenza-derived HLA-B*18:01-restricted epitopes.
Clin Transl Immunology, 13, 2024
8EF0
DownloadVisualize
BU of 8ef0 by Molmil
Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ104-D
分子名称: PHOSPHATE ION, ZINC ION, rhMZ104-D antibody heavy chain, ...
著者Sankhala, R.S, Joyce, M.G.
登録日2022-09-07
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes.
Cell Rep, 42, 2023
8EF1
DownloadVisualize
BU of 8ef1 by Molmil
Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ103-A
分子名称: rhMZ103-A antibody heavy chain, rhMZ103-A antibody light chain
著者Sankhala, R.S, Joyce, M.G.
登録日2022-09-07
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes.
Cell Rep, 42, 2023
6ZI2
DownloadVisualize
BU of 6zi2 by Molmil
OleP-oleandolide(DEO) in low salt crystallization conditions
分子名称: (3~{R},4~{S},5~{R},6~{S},7~{S},9~{S},11~{R},12~{S},13~{R},14~{R})-3,5,7,9,11,13,14-heptamethyl-4,6,12-tris(oxidanyl)-1-oxacyclotetradecane-2,10-dione, Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
著者Savino, C, Montemiglio, L.C, Vallone, B, Parisi, G, Cecchetti, C.
登録日2020-06-24
公開日2020-10-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
8U20
DownloadVisualize
BU of 8u20 by Molmil
A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 5
分子名称: Green Fluorescent Protein Variant #5, ccGFP 5
著者Hung, L.-W, Terwilliger, T.C, Waldo, G, Nguyen, H.B.
登録日2023-09-05
公開日2024-01-31
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Engineering highly stable variants of Corynactis californica green fluorescent proteins.
Protein Sci., 33, 2024
8EEZ
DownloadVisualize
BU of 8eez by Molmil
Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ100-C
分子名称: rhMZ100-C antibody heavy chain, rhMZ100-C antibody light chain
著者Sankhala, R.S, Joyce, M.G.
登録日2022-09-07
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes.
Cell Rep, 42, 2023
7TQX
DownloadVisualize
BU of 7tqx by Molmil
CaKip3[2-482] - AMP-PNP in complex with a microtubule
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein, ...
著者Benoit, M.P.M.H, Asenjo, A.B, Hunter, B, Allingham, J, Sosa, H.
登録日2022-01-27
公開日2022-07-20
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Kinesin-8-specific loop-2 controls the dual activities of the motor domain according to tubulin protofilament shape.
Nat Commun, 13, 2022
5ID7
DownloadVisualize
BU of 5id7 by Molmil
Crystal structure of human serum albumin in complex with phosphorodithioate derivative of myristoyl cyclic phosphatidic acid (cPA)
分子名称: (4S)-2-sulfanylidene-4-[(tetradecanoyloxy)methyl]-1,3,2lambda~5~-dioxaphospholane-2-thiolate, DI(HYDROXYETHYL)ETHER, Serum albumin, ...
著者Sekula, B, Bujacz, A, Rytczak, P, Bujacz, G.
登録日2016-02-24
公開日2016-05-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structural evidence of the species-dependent albumin binding of the modified cyclic phosphatidic acid with cytotoxic properties.
Biosci.Rep., 36, 2016
7TQY
DownloadVisualize
BU of 7tqy by Molmil
CaKip3[2-482] - ADP-AlFx in complex with a microtubule
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, GUANOSINE-5'-DIPHOSPHATE, ...
著者Benoit, M.P.M.H, Asenjo, A.B, Hunter, B, Allingham, J, Sosa, H.
登録日2022-01-27
公開日2022-07-20
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Kinesin-8-specific loop-2 controls the dual activities of the motor domain according to tubulin protofilament shape.
Nat Commun, 13, 2022
7TR0
DownloadVisualize
BU of 7tr0 by Molmil
CaKip3[2-436] - AMP-PNP in complex with a microtubule
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein, ...
著者Benoit, M.P.M.H, Asenjo, A.B, Hunter, B, Allingham, J, Sosa, H.
登録日2022-01-27
公開日2022-07-20
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Kinesin-8-specific loop-2 controls the dual activities of the motor domain according to tubulin protofilament shape.
Nat Commun, 13, 2022
7TR1
DownloadVisualize
BU of 7tr1 by Molmil
CaKip3[2-436]-L2-mutant(HsKHC) - AMP-PNP in complex with a microtubule
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein,Kinesin-1 heavy chain, ...
著者Benoit, M.P.M.H, Asenjo, A.B, Hunter, B, Allingham, J.S, Sosa, H.
登録日2022-01-27
公開日2022-07-20
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Kinesin-8-specific loop-2 controls the dual activities of the motor domain according to tubulin protofilament shape.
Nat Commun, 13, 2022
8AEW
DownloadVisualize
BU of 8aew by Molmil
Malonyl-CoA reductase from Chloroflexus aurantiacus - N-terminal Apo
分子名称: Short-chain dehydrogenase/reductase SDR
著者Kabasakal, B.V, Murray, J.W.
登録日2022-07-13
公開日2023-04-05
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Dynamic lid domain of Chloroflexus aurantiacus Malonyl-CoA reductase controls the reaction.
Biochimie, 219, 2023
6W3G
DownloadVisualize
BU of 6w3g by Molmil
Rd1NTF2_04 with long sheet
分子名称: Rd1NTF2_04
著者Bick, M.J, Basanta, B, Sankaran, B, Baker, D.
登録日2020-03-09
公開日2020-04-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献An enumerative algorithm for de novo design of proteins with diverse pocket structures.
Proc.Natl.Acad.Sci.USA, 117, 2020
1C7M
DownloadVisualize
BU of 1c7m by Molmil
SOLUTION STRUCTURE OF THE FUNCTIONAL DOMAIN OF PARACOCCUS DENITRIFICANS CYTOCHROME C552 IN THE REDUCED STATE
分子名称: HEME C, PROTEIN (CYTOCHROME C552)
著者Pristovsek, P, Luecke, C, Reincke, B, Ludwig, B, Rueterjans, H.
登録日2000-03-03
公開日2000-07-19
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the functional domain of Paracoccus denitrificans cytochrome c552 in the reduced state.
Eur.J.Biochem., 267, 2000
5M8L
DownloadVisualize
BU of 5m8l by Molmil
Crystal structure of human tyrosinase related protein 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lai, X, Soler-Lopez, M, Wichers, H.J, Dijkstra, B.W.
登録日2016-10-29
公開日2017-07-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of Human Tyrosinase Related Protein 1 Reveals a Binuclear Zinc Active Site Important for Melanogenesis.
Angew. Chem. Int. Ed. Engl., 56, 2017
5M8S
DownloadVisualize
BU of 5m8s by Molmil
Crystal structure of human tyrosinase related protein 1 mutant (T391V-R374S-Y362F) in complex with phenylthiourea (PTU)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lai, X, Soler-Lopez, M, Wichers, H.J, Dijkstra, B.W.
登録日2016-10-29
公開日2018-01-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Phenylthiourea Binding to Human Tyrosinase-Related Protein 1
Int J Mol Sci, 2020
6NWE
DownloadVisualize
BU of 6nwe by Molmil
Crystal structure of bovine opsin with beta octyl glucoside bound
分子名称: ILENLKDVGLF peptide CT2, PALMITIC ACID, Rhodopsin, ...
著者Eger, B.T, Morizumi, T, Ernst, O.P.
登録日2019-02-06
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.705 Å)
主引用文献Odorant-binding site in visual opsin
To Be Published
1CB6
DownloadVisualize
BU of 1cb6 by Molmil
STRUCTURE OF HUMAN APOLACTOFERRIN AT 2.0 A RESOLUTION.
分子名称: CHLORIDE ION, Lactotransferrin
著者Jameson, G.B, Anderson, B.F, Norris, G.E, Thomas, D.H, Baker, E.N.
登録日1999-03-01
公開日1999-03-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of human apolactoferrin at 2.0 A resolution. Refinement and analysis of ligand-induced conformational change.
Acta Crystallogr.,Sect.D, 54, 1998
4YFY
DownloadVisualize
BU of 4yfy by Molmil
X-ray structure of the Viof N-formyltransferase from Providencia alcalifaciens O30 in complex with THF and TDP-Qui4N
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, N-[4-({[(6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, ...
著者Genthe, N.A, Thoden, J.B, Benning, M.M, Holden, H.M.
登録日2015-02-25
公開日2015-03-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular structure of an N-formyltransferase from Providencia alcalifaciens O30.
Protein Sci., 24, 2015
6TAL
DownloadVisualize
BU of 6tal by Molmil
3C-like protease from Southampton virus complexed with FMOPL000227a.
分子名称: 5-ethyl-1,3,4-thiadiazol-2-amine, DIMETHYL SULFOXIDE, Genome polyprotein, ...
著者Guo, J, Cooper, J.B.
登録日2019-10-29
公開日2020-08-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献In crystallo-screening for discovery of human norovirus 3C-like protease inhibitors.
J Struct Biol X, 4, 2020
7SSN
DownloadVisualize
BU of 7ssn by Molmil
Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2021-11-11
公開日2022-02-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP.
Nat Commun, 12, 2021
6ZBI
DownloadVisualize
BU of 6zbi by Molmil
Ternary complex of Calmodulin bound to 2 molecules of NHE1
分子名称: CALCIUM ION, Calmodulin-1, Sodium/hydrogen exchanger 1
著者Prestel, A, Kragelund, B.B, Pedersen, E.S, Pedersen, S.F, Sjoegaard-Frich, L.M.
登録日2020-06-08
公開日2021-03-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Dynamic Na + /H + exchanger 1 (NHE1) - calmodulin complexes of varying stoichiometry and structure regulate Ca 2+ -dependent NHE1 activation.
Elife, 10, 2021

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon