PDB: 1500 件ウェブページステータス検索Chemie searchBIRD

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6QV4	Crystal structure of the Ski2 RNA-helicase Brr2 from Chaetomium thermophilum bound to ATP-gamma-S 分子名称: ACETATE ION, MANGANESE (II) ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Absmeier, E, Santos, K.F, Wahl, M.C. 登録日 2019-03-01 公開日 2020-01-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Molecular Mechanism Underlying Inhibition of Intrinsic ATPase Activity in a Ski2-like RNA Helicase. Structure, 28, 2020
3BO7	Crystal structure of Toxoplasma gondii peptidyl-prolyl cis-trans isomerase, 541.m00136 分子名称: 1,2-ETHANEDIOL, CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYCLOPHILIN-TYPE, ... 著者 Wernimont, A.K, Lew, J, Kozieradzki, I, Lin, Y.H, Sun, X, Khuu, C, Zhao, Y, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Hui, R, Artz, J.D, Xiao, T, Structural Genomics Consortium (SGC) 登録日 2007-12-17 公開日 2008-02-19 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal Structure of Toxoplasma Gondii Peptidyl-Prolyl Cis-Trans Isomerase, 541.M00136. To be Published
3BO2	A relaxed active site following exon ligation by a group I intron 分子名称: Group I intron P9, MAGNESIUM ION, RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*G)-3'), ... 著者 Lipchock, S.V, Strobel, S.A. 登録日 2007-12-17 公開日 2008-04-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.31 Å) 主引用文献 A relaxed active site after exon ligation by the group I intron Proc.Natl.Acad.Sci.Usa, 105, 2008
3BO3	A relaxed active site following exon ligation by a group I intron 分子名称: Group I intron P9, MAGNESIUM ION, POTASSIUM ION, ... 著者 Lipchock, S.V, Strobel, S.A. 登録日 2007-12-17 公開日 2008-04-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 A relaxed active site after exon ligation by the group I intron Proc.Natl.Acad.Sci.Usa, 105, 2008
3BO4	A relaxed active site following exon ligation by a group I intron 分子名称: DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*A)-D(P*DG)-3'), DNA/RNA (5'-R(*CP*A)-D(P*DU)-R(P*AP*CP*GP*GP*CP*C)-3'), Group I intron P9, ... 著者 Lipchock, S.V, Strobel, S.A. 登録日 2007-12-17 公開日 2008-04-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.33 Å) 主引用文献 A relaxed active site after exon ligation by the group I intron Proc.Natl.Acad.Sci.Usa, 105, 2008
3BWP	Crystal structure of a self-spliced group II intron 分子名称: Group IIC intron, MAGNESIUM ION, POTASSIUM ION 著者 Toor, N, Keating, K.S, Taylor, S.D, Pyle, A.M. 登録日 2008-01-10 公開日 2008-04-15 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal structure of a self-spliced group II intron Science, 320, 2008
4XQ3	Crystal structure of Sso-SmAP2 分子名称: Like-Sm ribonucleoprotein core 著者 Bezerra, G.A, Martens, B, Kreuter, M.J, Grishkovskaya, I, Manica, M, Arkhipova, V, Blasi, U, Djinovic-Carugo, K. 登録日 2015-01-18 公開日 2015-04-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The Heptameric SmAP1 and SmAP2 Proteins of the Crenarchaeon Sulfolobus Solfataricus Bind to Common and Distinct RNA Targets. Life, 5, 2015
1UH6	Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06 分子名称: ubiquitin-like 5 著者 Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2003-06-25 公開日 2003-12-25 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06 To be Published
4YVD	Crytsal structure of human Pleiotropic Regulator 1 (PRL1) 分子名称: CHLORIDE ION, Pleiotropic regulator 1, SODIUM ION, ... 著者 Dong, A, Zeng, H, Xu, C, Tempel, W, Li, Y, He, H, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Wu, H, Structural Genomics Consortium (SGC) 登録日 2015-03-19 公開日 2015-04-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crytsal structure of human Pleiotropic Regulator 1 (PRL1). to be published
5J4B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Melnikov, S.V, Soll, D, Steitz, T.A, Polikanov, Y.S. 登録日 2016-03-31 公開日 2016-04-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Insights into RNA binding by the anticancer drug cisplatin from the crystal structure of cisplatin-modified ribosome. Nucleic Acids Res., 44, 2016
5J4C	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Melnikov, S.V, Soll, D, Steitz, T.A, Polikanov, Y.S. 登録日 2016-03-31 公開日 2016-04-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Insights into RNA binding by the anticancer drug cisplatin from the crystal structure of cisplatin-modified ribosome. Nucleic Acids Res., 44, 2016
1ST4	Structure of DcpS bound to m7GpppA 分子名称: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, YTTRIUM (III) ION, mRNA decapping enzyme 著者 Gu, M, Fabrega, C, Liu, S.W, Liu, H, Kiledjian, M, Lima, C.D. 登録日 2004-03-24 公開日 2004-04-13 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Insights into the structure, mechanism, and regulation of scavenger mRNA decapping activity Mol.Cell, 14, 2004
1T0K	Joint X-ray and NMR Refinement of Yeast L30e-mRNA complex 分子名称: 5'-R(*G*GP*AP*CP*GP*CP*AP*GP*AP*GP*AP*UP*GP*GP*UP*C)-3', 5'-R(*GP*AP*CP*CP*GP*GP*AP*GP*UP*GP*UP*CP*C)-3', 60S ribosomal protein L30, ... 著者 Chao, J.A, Williamson, J.R. 登録日 2004-04-09 公開日 2004-07-20 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (3.24 Å) 主引用文献 Joint X-Ray and NMR Refinement of the Yeast L30e-mRNA Complex Structure, 12, 2004
1V2Y	Solution Structure of Mouse Hypothetical Gene (RIKEN cDNA 3300001G02) Product Homologous to Ubiquitin Fold 分子名称: 3300001G02Rik protein 著者 Zhao, C, Kigawa, T, Tomizawa, T, Koshiba, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2003-10-17 公開日 2004-04-17 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Solution Structure of Mouse Hypothetical Gene (RIKEN cDNA 3300001G02) Product Homologous to Ubiquitin Fold To be Published
4ZKA	High Resolution Crystal Structure of Fox1 RRM 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, RNA binding protein fox-1 homolog 1, SULFATE ION, ... 著者 Blatter, M, Allain, F.H.-T. 登録日 2015-04-30 公開日 2016-06-29 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 High Resolution Crystal Structure of Fox1 RRM To Be Published
1UZC	THE STRUCTURE OF AN FF DOMAIN FROM HUMAN HYPA/FBP11 分子名称: HYPOTHETICAL PROTEIN FLJ21157 著者 Allen, M.D, Jemth, P, Friedler, A, Schon, O, Bycroft, M. 登録日 2004-03-09 公開日 2004-04-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The Structure of an Ff Domain from Human Hypa/Fbp11. J.Mol.Biol., 323, 2002
1ST0	Structure of DcpS bound to m7GpppG 分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, YTTRIUM (III) ION, mRNA decapping enzyme 著者 Gu, M, Fabrega, C, Liu, S.W, Liu, H, Kiledjian, M, Lima, C.D. 登録日 2004-03-24 公開日 2004-04-13 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Insights into the structure, mechanism, and regulation of scavenger mRNA decapping activity Mol.Cell, 14, 2004
1VLR	Crystal structure of mRNA decapping enzyme (DcpS) from Mus musculus at 1.83 A resolution 分子名称: 1,2-ETHANEDIOL, mRNA decapping enzyme 著者 Joint Center for Structural Genomics (JCSG) 登録日 2004-08-10 公開日 2004-08-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Crystal structure of an Apo mRNA decapping enzyme (DcpS) from Mouse at 1.83 A resolution. Proteins, 60, 2005
8CDL	80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-01-31 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CDR	Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-01-31 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.04 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CF5	Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-02-02 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.71 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CGN	Non-rotated 80S S. cerevisiae ribosome with ligands 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-02-06 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.28 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CCS	80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-01-27 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (1.97 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CKU	Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-02-16 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.11 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CIV	Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-02-10 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.47 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024

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