PDB: 71589 件ウェブページステータス検索Chemie searchBIRD

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8TF3	Wildtype rabbit TRPV5 into nanodiscs in complex with econazole 分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[(2S)-2-[(4-CHLOROBENZYL)OXY]-2-(2,4-DICHLOROPHENYL)ETHYL]-1H-IMIDAZOLE, ERGOSTEROL, ... 著者 De Jesus-Perez, J.J, Fluck, E.C, Moiseenkova-Bell, V.Y. 登録日 2023-07-07 公開日 2024-01-10 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (2.94 Å) 主引用文献 Structural mechanism of TRPV5 inhibition by econazole. Structure, 32, 2024
8TF2	Wildtype rabbit TRPV5 into nanodiscs in Apo state 分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ERGOSTEROL, Transient receptor potential cation channel subfamily V member 5 著者 De Jesus-Perez, J.J, Fluck, E.C, Moiseenkova-Bell, V.Y. 登録日 2023-07-07 公開日 2024-01-10 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (2.57 Å) 主引用文献 Structural mechanism of TRPV5 inhibition by econazole. Structure, 32, 2024
8TF4	Wildtype rabbit TRPV5 into nanodiscs in the presence of PI(4,5)P2 and econazole 分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[(2S)-2-[(4-CHLOROBENZYL)OXY]-2-(2,4-DICHLOROPHENYL)ETHYL]-1H-IMIDAZOLE, ERGOSTEROL, ... 著者 De Jesus-Perez, J.J, Fluck, E.C, Moiseenkova-Bell, V.Y. 登録日 2023-07-07 公開日 2024-01-10 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 Structural mechanism of TRPV5 inhibition by econazole. Structure, 32, 2024
6TY7	Crystal structure of haloalkane dehalogenase variant DhaA115 domain-swapped dimer type-1 分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ... 著者 Markova, K, Chaloupkova, R, Damborsky, J, Marek, M. 登録日 2020-01-15 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Computational Enzyme Stabilization Can Affect Folding Energy Landscapes and Lead to Catalytically Enhanced Domain-Swapped Dimers Acs Catalysis, 11, 2021
7A8G	rsGreen0.7-K206A-H148G in the green-on state 分子名称: Green fluorescent protein, TRIETHYLENE GLYCOL 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2021-05-05 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
7A86	rsGreen0.7-K206A-F145L partially in the green-off state 分子名称: Green fluorescent protein, TRIETHYLENE GLYCOL 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2021-05-05 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
7A7O	rsGreen0.7-K206A in the green-on state 分子名称: Green fluorescent protein 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2021-05-05 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
7A8O	rsGreen0.7-K206A-N205S in the green-on state 分子名称: 1,2-ETHANEDIOL, Green fluorescent protein 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
7A83	rsGreen0.7-K206A-F145H in the green-on-state 分子名称: Green fluorescent protein, TRIETHYLENE GLYCOL 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2021-05-05 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
3J5S	EttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamics 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S7, ... 著者 Hashem, Y. 登録日 2013-11-15 公開日 2014-01-08 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 EttA regulates translation by binding the ribosomal E site and restricting ribosome-tRNA dynamics. Nat.Struct.Mol.Biol., 21, 2014
8FFO	Cryo-EM structure of wildtype rabbit TRPV5 with PI(4,5)P2 in nanodiscs 分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ERGOSTEROL, Transient receptor potential cation channel subfamily V member 5, ... 著者 De Jesus-Perez, J.J, Moiseenkova-Bell, V.Y. 登録日 2022-12-09 公開日 2023-11-01 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of the activation of TRPV5 channels by long-chain acyl-Coenzyme-A. Nat Commun, 14, 2023
8FHH	Wildtype rabbit TRPV5 in nanodiscs in the presence of oleoyl coenzyme A, Closed stated 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ERGOSTEROL, Transient receptor potential cation channel subfamily V member 5 著者 De Jesus-Perez, J.J, Moiseenkova-Bell, V.Y. 登録日 2022-12-14 公開日 2023-11-01 実験手法 ELECTRON MICROSCOPY (3.09 Å) 主引用文献 Structural basis of the activation of TRPV5 channels by long-chain acyl-Coenzyme-A. Nat Commun, 14, 2023
8FHI	Wildtype rabbit TRPV5 in nanodiscs in complex with oleoyl coenzyme A, Open stated 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ERGOSTEROL, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name), ... 著者 De Jesus-Perez, J.J, Moiseenkova-Bell, V.Y. 登録日 2022-12-14 公開日 2023-11-01 実験手法 ELECTRON MICROSCOPY (3.25 Å) 主引用文献 Structural basis of the activation of TRPV5 channels by long-chain acyl-Coenzyme-A. Nat Commun, 14, 2023
8FFQ	Wildtype rabbit TRPV5 into nanodiscs in the presence of PI(4,5)P2 and ruthenium red 分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ERGOSTEROL, Transient receptor potential cation channel subfamily V member 5, ... 著者 De Jesus-Perez, J.J, Fluck, E.C, Pumroy, R.A, Protopopova, A.D, Rocereta, J.A, Moiseenkova-Bell, V.Y. 登録日 2022-12-09 公開日 2024-02-07 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (2.65 Å) 主引用文献 Molecular details of ruthenium red pore block in TRPV channels. Embo Rep., 25, 2024
8FFN	RR-bound wildtype rabbit TRPV5 in nanodiscs 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ERGOSTEROL, Transient receptor potential cation channel subfamily V member 5, ... 著者 Fluck, E.C, De Jesus-Perez, J.J, Pumroy, R.A, Protopopova, A.D, Rocereta, J.A, Moiseenkova-Bell, V.Y. 登録日 2022-12-09 公開日 2024-02-07 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 Molecular details of ruthenium red pore block in TRPV channels. Embo Rep., 25, 2024
6XT8	Crystal structure of haloalkane dehalogenase variant DhaA115 domain-swapped dimer type-2 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ... 著者 Markova, K, Damborsky, J, Marek, M. 登録日 2020-01-15 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Computational Enzyme Stabilization Can Affect Folding Energy Landscapes and Lead to Catalytically Enhanced Domain-Swapped Dimers Acs Catalysis, 11, 2021
6XTC	Crystal structure of haloalkane dehalogenase variant DhaA177 domain-swapped dimer type-3 分子名称: GLYCEROL, Haloalkane dehalogenase variant DhaA177 domain-swapped dimer type-3, SULFATE ION 著者 Markova, K, Damborsky, J, Marek, M. 登録日 2020-01-16 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.543 Å) 主引用文献 Computational Enzyme Stabilization Can Affect Folding Energy Landscapes and Lead to Catalytically Enhanced Domain-Swapped Dimers Acs Catalysis, 11, 2021
1GRM	REFINEMENT OF THE SPATIAL STRUCTURE OF THE GRAMICIDIN A TRANSMEMBRANE ION-CHANNEL (RUSSIAN) 分子名称: GRAMICIDIN A 著者 Arseniev, A.S, Barsukov, I.L, Lomize, A.L, Orekhov, V.Y, Bystrov, V.F. 登録日 1993-10-18 公開日 1994-01-31 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Refinement of the Spatial Structure of the Gramicidin a Ion Channel Biol.Membr.(Ussr), 18, 1992
7MU0	MtbEttA in the ADP bound state 分子名称: ADENOSINE-5'-DIPHOSPHATE, Energy-dependent translational throttle protein EttA, MAGNESIUM ION 著者 Cui, Z, Zhang, J. 登録日 2021-05-14 公開日 2022-02-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis. Nat Commun, 13, 2022
7MSM	Mtb 70SIC in complex with MtbEttA at Trans_R0 state 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Cui, Z, Zhang, J. 登録日 2021-05-11 公開日 2022-02-02 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.79 Å) 主引用文献 Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis. Nat Commun, 13, 2022
7MSZ	Mtb 70SIC in complex with MtbEttA at Trans_R1 state 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Cui, Z, Zhang, J. 登録日 2021-05-12 公開日 2022-02-02 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis. Nat Commun, 13, 2022
7MSH	Mtb 70SIC in complex with MtbEttA at Pre_R1 state 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Cui, Z, Zhang, J. 登録日 2021-05-11 公開日 2022-02-02 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.23 Å) 主引用文献 Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis. Nat Commun, 13, 2022
7MSC	Mtb 70SIC in complex with MtbEttA at Pre_R0 state 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Cui, Z, Zhang, J. 登録日 2021-05-11 公開日 2022-02-02 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.97 Å) 主引用文献 Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis. Nat Commun, 13, 2022
5NF8	Solution structure of detergent-solubilized Rcf1, a yeast mitochondrial inner membrane protein involved in respiratory Complex III/IV supercomplex formation 分子名称: Respiratory supercomplex factor 1, mitochondrial 著者 Zhou, S, Pettersson, P, Sjoholm, J, Sjostrand, D, Hogbom, M, Brzezinski, P, Maler, L, Adelroth, P. 登録日 2017-03-13 公開日 2018-02-28 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Solution NMR structure of yeast Rcf1, a protein involved in respiratory supercomplex formation. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8AON	Oxidoreductase fragment of human QSOX1 in complex with a Fab fragment of a humanized anti-QSOX1 antibody 分子名称: GLYCEROL, Heavy chain, Light chain, ... 著者 Khmelnitsky, L, Fass, D. 登録日 2022-08-08 公開日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Reliable energy-based antibody humanization and stabilization To Be Published

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