PDB: 45744 件ウェブページステータス検索Chemie searchBIRD

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8UZK	Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (NADP+ bound) 分子名称: Betaine aldehyde dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SODIUM ION 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-11-15 公開日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (NADP+ bound) To be published
8V4J	Phosphoheptose isomerase GMHA from Burkholderia pseudomallei bound to inhibitor Mut148233 分子名称: 1-deoxy-1-[formyl(hydroxy)amino]-5-O-phosphono-D-ribitol, CHLORIDE ION, Phosphoheptose isomerase, ... 著者 Junop, M.S, Brown, C, Szabla, R. 登録日 2023-11-29 公開日 2023-12-13 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 Potentiating Activity of GmhA Inhibitors on Gram-Negative Bacteria. J.Med.Chem., 67, 2024
8V8Y	Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Orthorhombic P form) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, GLYCEROL, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-12-06 公開日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Orthorhombic P form) To be published
8PE9	Complex between DDR1 DS-like domain and PRTH-101 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Liu, J, Chiang, H, Xiong, W, Laurent, V, Griffiths, S.C, Duelfer, J, Deng, H, Sun, X, Yin, Y.W, Li, W, Audoly, L.P, An, Z, Schuerpf, T, Li, R, Zhang, N. 登録日 2023-06-13 公開日 2023-06-28 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3.152 Å) 主引用文献 A highly selective humanized DDR1 mAb reverses immune exclusion by disrupting collagen fiber alignment in breast cancer. J Immunother Cancer, 11, 2023
6C6C	Structure of glycolipid aGSA[20,6P] in complex with mouse CD1d 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, Beta-2-microglobulin, ... 著者 Zajonc, D.M, Wang, J. 登録日 2018-01-18 公開日 2019-01-30 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides. J.Biol.Chem., 294, 2019
8PFU	X-ray structure of the adduct formed upon reaction of Lysozyme with K3[Ru2(CO3)4] in condition A 分子名称: 6,8-bis(4-fluorophenyl)-1,5-bis(oxidanyl)-2,4-dioxa-6,8-diaza-1$l^{4},5$l^{4}-diruthenabicyclo[3.3.0]octan-3-one, CARBONATE ION, Lysozyme C, ... 著者 Teran, A, Ferraro, G, Merlino, A. 登録日 2023-06-16 公開日 2023-07-19 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 Charge effect in protein metalation reactions by diruthenium complexes Inorg Chem Front, 2023
8PFV	X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DAniF)(O2CCH3)3] in condition A 分子名称: 9,11-bis(4-methoxyphenyl)-3,7-dimethyl-2,4,6,8-tetraoxa-9,11-diaza-1$l^{4},5$l^{4}-diruthenatricyclo[3.3.3.0^{1,5}]undecane, CHLORIDE ION, Lysozyme C, ... 著者 Teran, A, Ferraro, G, Merlino, A. 登録日 2023-06-16 公開日 2023-07-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 Charge effect in protein metalation reactions by diruthenium complexes Inorg Chem Front, 2023
8V4H	X-ray structure of the NADP-dependent reductase from Campylobacter jejuni responsible for the synthesis of CDP-glucitol in the presence of CDP-glucitol 分子名称: CHLORIDE ION, PHOSPHATE ION, Putative nucleotide sugar dehydratase, ... 著者 Thoden, J.B, Schumann, M.E, Holden, H.M, Raushel, F.M. 登録日 2023-11-29 公開日 2023-12-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Biosynthesis of Cytidine Diphosphate-6-d-Glucitol for the Capsular Polysaccharides of Campylobacter jejuni. Biochemistry, 63, 2024
7R9X	Crystal structure of a dehydrating condensation domain, AmbE-CmodAA, involved in nonribosomal peptide synthesis 分子名称: AmbE, IODIDE ION, SODIUM ION 著者 Fortinez, C.M, Schmeing, T.M. 登録日 2021-06-29 公開日 2022-07-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Structure and Function of a Dehydrating Condensation Domain in Nonribosomal Peptide Biosynthesis. J.Am.Chem.Soc., 144, 2022
8PFT	X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(D-p-FPhF)(CO3)3] in condition A 分子名称: 6,8-bis(4-fluorophenyl)-1,5-bis(oxidanyl)-2,4-dioxa-6,8-diaza-1$l^{4},5$l^{4}-diruthenabicyclo[3.3.0]octan-3-one, CHLORIDE ION, Lysozyme C, ... 著者 Teran, A, Ferraro, G, Merlino, A. 登録日 2023-06-16 公開日 2023-07-19 実験手法 X-RAY DIFFRACTION (1.304 Å) 主引用文献 Charge effect in protein metalation reactions by diruthenium complexes Inorg Chem Front, 2023
8PFY	X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(DAniF)(CO3)3] in condition B 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Lysozyme C, ... 著者 Teran, A, Ferraro, G, Merlino, A. 登録日 2023-06-16 公開日 2023-07-19 実験手法 X-RAY DIFFRACTION (1.19 Å) 主引用文献 Charge effect in protein metalation reactions by diruthenium complexes Inorg Chem Front, 2023
6AQ6	X-ray crystal structure of Erythrina crista-galli lectin in complex with N-acetyllactosamine 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ... 著者 Gerlits, O, Woods, R.J. 登録日 2017-08-18 公開日 2018-08-22 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.903 Å) 主引用文献 Defining the Specificity of Carbohydrate-Protein Interactions by Quantifying Functional Group Contributions. J Chem Inf Model, 58, 2018
8PFW	X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(DAniF)(CO3)3] in condition A 分子名称: CHLORIDE ION, K2[Ru2(DAniF)(CO3)3], Lysozyme C, ... 著者 Teran, A, Ferraro, G, Merlino, A. 登録日 2023-06-16 公開日 2023-07-19 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Charge effect in protein metalation reactions by diruthenium complexes Inorg Chem Front, 2023
7R5C	Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-29 (G206C, R207S, D210L, S211V) 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Isoaspartyl peptidase, ... 著者 Barciszewski, J, Imiolczyk, B, Loch, J.I, Jaskolski, M. 登録日 2022-02-10 公開日 2022-07-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase. Acta Crystallogr D Struct Biol, 78, 2022
8PFX	X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(D-p-FPhF)(CO3)3] in condition B 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6,8-bis(4-fluorophenyl)-1,5-bis(oxidanyl)-2,4-dioxa-6,8-diaza-1$l^{4},5$l^{4}-diruthenabicyclo[3.3.0]octan-3-one, FORMIC ACID, ... 著者 Teran, A, Ferraro, G, Merlino, A. 登録日 2023-06-16 公開日 2023-07-19 実験手法 X-RAY DIFFRACTION (1.03 Å) 主引用文献 Charge effect in protein metalation reactions by diruthenium complexes Inorg Chem Front, 2023
7R1G	Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-38 (R207C, D210S, S211V) 分子名称: Beta-aspartyl-peptidase, Isoaspartyl peptidase, SODIUM ION 著者 Loch, J.I, Kadziolka, K, Jaskolski, M. 登録日 2022-02-02 公開日 2022-07-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase. Acta Crystallogr D Struct Biol, 78, 2022
7QYM	Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-18 (R207V, D210P, S211W) 分子名称: Beta-aspartyl-peptidase, CHLORIDE ION, Isoaspartyl peptidase, ... 著者 Loch, J.I, Klonecka, A, Kadziolka, K, Bonarek, P, Barciszewski, J, Imiolczyk, B, Brzezinski, K, Jaskolski, M. 登録日 2022-01-28 公開日 2022-07-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase. Acta Crystallogr D Struct Biol, 78, 2022
7QYX	Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-24 (R207A, D210S, S211T) 分子名称: Beta-aspartyl-peptidase, CHLORIDE ION, Isoaspartyl peptidase, ... 著者 Loch, J.I, Klonecka, A, Kadziolka, K, Bonarek, P, Barciszewski, J, Imiolczyk, B, Brzezinski, K, Jaskolski, M. 登録日 2022-01-29 公開日 2022-07-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase. Acta Crystallogr D Struct Biol, 78, 2022
5JZY	Thrombin in complex with (S)-1-((R)-2-amino-3-cyclohexylpropanoyl)-N-(4-carbamimidoylbenzyl)pyrrolidine-2-carboxamide 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-cyclohexyl-D-alanyl-N-[(4-carbamimidoylphenyl)methyl]-L-prolinamide, DIMETHYL SULFOXIDE, ... 著者 Sandner, A, Heine, A, Klebe, G. 登録日 2016-05-17 公開日 2017-06-07 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.27 Å) 主引用文献 Strategies for Late-Stage Optimization: Profiling Thermodynamics by Preorganization and Salt Bridge Shielding. J.Med.Chem., 62, 2019
8AEB	SARS-CoV-2 Main Protease complexed with N-(pyridin-3-ylmethyl)thioformamide 分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, N-(pyridin-3-ylmethyl)thioformamide, ... 著者 Hanoulle, X, Charton, J, Deprez, B. 登録日 2022-07-12 公開日 2023-03-15 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Novel dithiocarbamates selectively inhibit 3CL protease of SARS-CoV-2 and other coronaviruses. Eur.J.Med.Chem., 250, 2023
7RJ9	Crystal structure of the Vitronectin hemopexin-like domain binding Calcium 分子名称: CALCIUM ION, CHLORIDE ION, SODIUM ION, ... 著者 Aleshin, A.E, Marassi, F.M. 登録日 2021-07-20 公開日 2022-07-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of the Vitronectin hemopexin-like domain binding Calcium To Be Published
8AHQ	VirD/holo-ACP5b of Streptomyces virginiae complex 分子名称: 1,2-ETHANEDIOL, 4'-PHOSPHOPANTETHEINE, CHLORIDE ION, ... 著者 Collin, S, Gruez, A. 登録日 2022-07-22 公開日 2023-03-15 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Decrypting the programming of beta-methylation in virginiamycin M biosynthesis. Nat Commun, 14, 2023
8Q1S	Pathogenic mutations of human phosphorylation sites affect protein-protein interactions 分子名称: 1,2-ETHANEDIOL, 14-3-3 protein epsilon, BROMIDE ION, ... 著者 Roske, Y, Daumke, O, Rrustemi, T, Selbach, M. 登録日 2023-08-01 公開日 2024-02-21 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (3.23 Å) 主引用文献 Pathogenic mutations of human phosphorylation sites affect protein-protein interactions. Nat Commun, 15, 2024
8PS0	Cryo-EM structure of Sodium proton exchanger NhaA with bound cardiolipin 分子名称: CARDIOLIPIN, Na(+)/H(+) antiporter NhaA 著者 Gulati, A, Meier, P, Kokane, S, Drew, D. 登録日 2023-07-13 公開日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.37 Å) 主引用文献 Cryo-EM structure of Sodium proton exchanger NhaA with bound cardiolipin To Be Published
8B45	Structure of CC-Tri with Aib@b,c: CC-Tri-(UbUc)4 分子名称: 1,2-ETHANEDIOL, CC-Tri-(UbUc)4, SODIUM ION, ... 著者 Kumar, P, Martin, F.J.O, Dawson, W.M, Zieleniewski, F, Woolfson, D.N. 登録日 2022-09-19 公開日 2023-09-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of CC-Tri with Aib@b,c: CC-Tri-(UbUc)4 To Be Published

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