PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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4IEI	Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6 complexed with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Gene 2 protein 著者 Zhao, H, Christensen, T, Kamau, Y, Tang, L. 登録日 2012-12-13 公開日 2013-05-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage. Proc.Natl.Acad.Sci.USA, 110, 2013
7LBW	Crystal structure of TFAM (mitochondrial transcription factor A) bridging two non-sequence specific DNA substrates 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA (5'-D(P*TP*AP*GP*CP*CP*TP*TP*TP*CP*TP*AP*TP*TP*AP*GP*CP*TP*CP*TP*TP*AP*G)-3'), ... 著者 Choi, W.S, Garcia-Diaz, M. 登録日 2021-01-09 公開日 2022-01-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 A minimal motif for sequence recognition by mitochondrial transcription factor A (TFAM). Nucleic Acids Res., 50, 2022
7BM8	Crystal structure of the C-terminally truncated chromosome-partitioning protein ParB from Caulobacter crescentus complexed with CTP-gamma-S 分子名称: CYTIDINE-5'-TRIPHOSPHATE, Chromosome-partitioning protein ParB, MAGNESIUM ION 著者 Jalal, A.S, Tran, N.T, Stevenson, C.E.M, Lawson, D.M, Le, T.B.K. 登録日 2021-01-19 公開日 2021-04-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.73 Å) 主引用文献 A CTP-dependent gating mechanism enables ParB spreading on DNA. Elife, 10, 2021
4IEE	Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6 complexed with ATP-r-S 分子名称: Gene 2 protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER 著者 Zhao, H, Christensen, T, Kamau, Y, Tang, L. 登録日 2012-12-13 公開日 2013-05-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage. Proc.Natl.Acad.Sci.USA, 110, 2013
4IFE	Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6 complexed with ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Gene 2 protein 著者 Zhao, H, Christensen, T, Kamau, Y, Tang, L. 登録日 2012-12-14 公開日 2013-05-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage. Proc.Natl.Acad.Sci.USA, 110, 2013
4DYC	Crystal Structure of the terminase small subunit gp1 with D19R mutation of the bacterial virus sf6 分子名称: Terminase small subunit 著者 Zhao, H, Tang, L. 登録日 2012-02-28 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity. J.Mol.Biol., 423, 2012
6O1O	Cryo-EM structure of the T. thermophilus Csm complex bound to target ssRNA 分子名称: Csm1, Csm2, Csm3, ... 著者 Liu, J.J, Liu, T.Y. 登録日 2019-02-21 公開日 2019-07-10 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Target preference of Type III-A CRISPR-Cas complexes at the transcription bubble. Nat Commun, 10, 2019
5TXN	STRUCTURE OF Q151M MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP 分子名称: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*G)-3'), ... 著者 Das, K, Martinez, S.M, Arnold, E. 登録日 2016-11-17 公開日 2017-04-05 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structural Insights into HIV Reverse Transcriptase Mutations Q151M and Q151M Complex That Confer Multinucleoside Drug Resistance. Antimicrob. Agents Chemother., 61, 2017
4DYR	Crystal structure of terminase small subunit gp1 of the bacterial virus sf6 with CAPS PH10.5 buffer 分子名称: Gene 1 protein 著者 Zhao, H, Tang, L. 登録日 2012-02-29 公開日 2012-10-17 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity. J.Mol.Biol., 423, 2012
4DYQ	High resolution crystal structure of terminase small subunit gp1 of the bacterial virus sf6 分子名称: Gene 1 protein 著者 Zhao, H, Tang, L. 登録日 2012-02-29 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.502 Å) 主引用文献 Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity. J.Mol.Biol., 423, 2012
4DZJ	Crystal structure of the terminase small subunit gp1 with K59E mutation of the bacterial virus sf6 分子名称: Gene 1 protein 著者 Zhao, H, Tang, L. 登録日 2012-03-01 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity. J.Mol.Biol., 423, 2012
6CIL	PRE-REACTION COMPLEX, RAG1(E962Q)/2-INTACT/INTACT 12/23RSS COMPLEX IN MN2+ 分子名称: High mobility group protein B1, Intact 12RSS substrate forward strand, Intact 12RSS substrate reverse strand, ... 著者 Chuenchor, W, Chen, X, Kim, M.S, Gellert, M, Yang, W. 登録日 2018-02-24 公開日 2018-04-25 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (4.15 Å) 主引用文献 Cracking the DNA Code for V(D)J Recombination. Mol. Cell, 70, 2018
6WG6	Crystal structure of human SMC1-SMC3 hinge domain heterodimer in north-open conformation 分子名称: Structural maintenance of chromosomes protein, Structural maintenance of chromosomes protein 3, poly(dT) 著者 Shi, Z.B, Yu, H. 登録日 2020-04-04 公開日 2020-05-20 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.54 Å) 主引用文献 Cryo-EM structure of the human cohesin-NIPBL-DNA complex. Science, 368, 2020
4DZP	Crystal structure of the terminase small subunit gp1 with R48A mutation of the bacterial virus sf6 分子名称: Gene 1 protein 著者 Zhao, H, Tang, L. 登録日 2012-03-01 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity. J.Mol.Biol., 423, 2012
3P8M	Human dynein light chain (DYNLL2) in complex with an in vitro evolved peptide dimerized by leucine zipper 分子名称: Dynein light chain 2, General control protein GCN4 著者 Rapali, P, Radnai, L, Suveges, D, Hetenyi, C, Harmat, V, Tolgyesi, F, Wahlgren, W.Y, Katona, G, Nyitray, L, Pal, G. 登録日 2010-10-14 公開日 2011-08-31 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Directed evolution reveals the binding motif preference of the LC8/DYNLL hub protein and predicts large numbers of novel binders in the human proteome. Plos One, 6, 2011
4IDH	Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6 分子名称: Gene 2 protein 著者 Zhao, H, Christensen, T, Kamau, Y, Tang, L. 登録日 2012-12-12 公開日 2013-05-01 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage. Proc.Natl.Acad.Sci.USA, 110, 2013
2YUM	Solution structure of the Myb-like DNA-binding domain of human ZZZ3 protein 分子名称: Zinc finger ZZ-type-containing protein 3 著者 Abe, H, Tochio, N, Miyamoto, K, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-06 公開日 2007-10-09 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the Myb-like DNA-binding domain of human ZZZ3 protein To be Published
6OMV	CryoEM structure of the LbCas12a-crRNA-AcrVA4-DNA complex 分子名称: AcrVA4, Cpf1, DNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*GP*GP*A)-3'), ... 著者 Chang, L, Li, Z, Zhang, H. 登録日 2019-04-19 公開日 2019-06-12 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural Basis for the Inhibition of CRISPR-Cas12a by Anti-CRISPR Proteins. Cell Host Microbe, 25, 2019
6A45	Structure of mouse TREX2 分子名称: PHOSPHATE ION, Three prime repair exonuclease 2 著者 Hsiao, Y.Y. 登録日 2018-06-19 公開日 2018-11-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.904 Å) 主引用文献 Structural insights into the duplex DNA processing of TREX2 Nucleic Acids Res., 46, 2018
3VNC	Crystal Structure of TIP-alpha N25 from Helicobacter Pylori in its natural dimeric form 分子名称: TIP-alpha 著者 Gao, M, Li, D, Hu, Y, Zou, Q, Wang, D.-C. 登録日 2012-01-11 公開日 2012-10-03 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of TNF-alpha-Inducing Protein from Helicobacter Pylori in Active Form Reveals the Intrinsic Molecular Flexibility for Unique DNA-Binding Plos One, 7, 2012
3FLD	Crystal structure of the trai c-terminal domain 分子名称: Protein traI, SULFATE ION 著者 Guogas, L.M, Kennedy, S.A, Redinbo, M.R. 登録日 2008-12-18 公開日 2009-02-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A novel fold in the TraI relaxase-helicase c-terminal domain is essential for conjugative DNA transfer. J.Mol.Biol., 386, 2009
6APY	Scabin (W128Y) toxin from Streptomyces scabies 分子名称: Scabin 著者 Lyons, B, Lidster, T, Merrill, A.R. 登録日 2017-08-18 公開日 2017-12-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Characterization of the catalytic signature of Scabin toxin, a DNA-targeting ADP-ribosyltransferase. Biochem. J., 475, 2018
3ISP	Crystal structure of ArgP from Mycobacterium tuberculosis 分子名称: HTH-type transcriptional regulator Rv1985c/MT2039 著者 Zhou, X, Lou, Z, Sheng, F, Bartlam, M, Wang, H, Rao, Z. 登録日 2009-08-27 公開日 2010-02-16 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of ArgP from Mycobacterium tuberculosis Confirms Two Distinct Conformations of Full-length LysR Transcriptional Regulators and Reveals Its Function in DNA Binding and Transcriptional Regulation. J.Mol.Biol., 2009
8FCU	Cryo-EM structure of Cascade-DNA-TniQ-TnsC complex in type I-B CAST system 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Non-target DNA strand, ... 著者 Chang, L, Wang, S. 登録日 2022-12-01 公開日 2023-08-09 最終更新日 2024-01-31 実験手法 ELECTRON MICROSCOPY (3.19 Å) 主引用文献 Molecular mechanism for Tn7-like transposon recruitment by a type I-B CRISPR effector. Cell, 186, 2023
7QV3	Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Filbeck, S, Pfeffer, S. 登録日 2022-01-19 公開日 2022-03-09 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (5.14 Å) 主引用文献 Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue. Nature, 603, 2022

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