PDB: 46200 件ウェブページステータス検索Chemie searchBIRD

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1BFT	STRUCTURE OF NF-KB P50 HOMODIMER BOUND TO A KB SITE 分子名称: NUCLEAR FACTOR NF-KAPPA-B P65 著者 Huang, D.B, Huxford, T, Chen, Y.Q, Ghosh, G. 登録日 1997-09-12 公開日 1998-01-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The role of DNA in the mechanism of NFkappaB dimer formation: crystal structures of the dimerization domains of the p50 and p65 subunits. Structure, 5, 1997
6HPB	Crystal structure of the E.coli HicAB toxin-antitoxin complex 分子名称: Antitoxin HicB, SULFATE ION, mRNA interferase toxin HicA 著者 Manav, M.C, Brodersen, D.E. 登録日 2018-09-20 公開日 2019-09-18 最終更新日 2019-11-13 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain. Structure, 27, 2019
2JUL	NMR Structure of DREAM 分子名称: CALCIUM ION, Calsenilin 著者 Ames, J. 登録日 2007-08-30 公開日 2008-04-22 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 NMR structure of DREAM: Implications for Ca(2+)-dependent DNA binding and protein dimerization. Biochemistry, 47, 2008
2OE2	MSrecA-native-low humidity 95% 分子名称: PHOSPHATE ION, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2006-12-28 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
2ADR	ADR1 DNA-BINDING DOMAIN FROM SACCHAROMYCES CEREVISIAE, NMR, 25 STRUCTURES 分子名称: ADR1, ZINC ION 著者 Bowers, P.M, Kleivt, R.E. 登録日 1998-03-20 公開日 1998-06-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A folding transition and novel zinc finger accessory domain in the transcription factor ADR1. Nat.Struct.Biol., 6, 1999
2ODW	MSrecA-ATP-GAMA-S complex 分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2006-12-27 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
4FHE	Spore photoproduct lyase C140A mutant 分子名称: 1,2-ETHANEDIOL, IRON/SULFUR CLUSTER, SULFATE ION, ... 著者 Benjdia, A, Heil, K, Barends, T.R.M, Carell, T, Schlichting, I. 登録日 2012-06-06 公開日 2012-07-18 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme. Nucleic Acids Res., 40, 2012
2OES	MSrecA-native-SSB 分子名称: PHOSPHATE ION, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2007-01-01 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
6G6J	The crystal structures of Human MYC:MAX bHLHZip complex 分子名称: Myc proto-oncogene protein, Protein max, SULFATE ION 著者 Allen, M.D, Zinzalla, G. 登録日 2018-04-01 公開日 2019-04-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal Structures and Nuclear Magnetic Resonance Studies of the Apo Form of the c-MYC:MAX bHLHZip Complex Reveal a Helical Basic Region in the Absence of DNA. Biochemistry, 58, 2019
6G6K	The crystal structures of Human MYC:MAX bHLHZip complex 分子名称: CHLORIDE ION, Myc proto-oncogene protein, Protein max 著者 Allen, M.D, Zinzalla, G. 登録日 2018-04-01 公開日 2019-04-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Crystal Structures and Nuclear Magnetic Resonance Studies of the Apo Form of the c-MYC:MAX bHLHZip Complex Reveal a Helical Basic Region in the Absence of DNA. Biochemistry, 58, 2019
2OEP	MSrecA-ADP-complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2006-12-31 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
2OFO	MSrecA-native 分子名称: PHOSPHATE ION, Protein recA 著者 Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M. 登録日 2007-01-04 公開日 2007-06-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.16 Å) 主引用文献 Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA J.Mol.Biol., 367, 2007
6G6L	The crystal structures of Human MYC:MAX bHLHZip complex 分子名称: Myc proto-oncogene protein, Protein max, SULFATE ION 著者 Allen, M.D, Zinzalla, G. 登録日 2018-04-01 公開日 2019-04-10 最終更新日 2023-04-05 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structures and Nuclear Magnetic Resonance Studies of the Apo Form of the c-MYC:MAX bHLHZip Complex Reveal a Helical Basic Region in the Absence of DNA. Biochemistry, 58, 2019
4FHC	Spore photoproduct lyase 分子名称: 1,2-ETHANEDIOL, IRON/SULFUR CLUSTER, SULFATE ION, ... 著者 Benjdia, A, Heil, K, Barends, T.R.M, Carell, T, Schlichting, I. 登録日 2012-06-06 公開日 2012-07-18 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme. Nucleic Acids Res., 40, 2012
4FHD	Spore photoproduct lyase complexed with dinucleoside spore photoproduct 分子名称: 1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-[[(5R)-1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-methyl-2,4-bis(oxidanylidene)-1,3-diazinan-5-yl]methyl]pyrimidine-2,4-dione, IRON/SULFUR CLUSTER, PYROPHOSPHATE 2-, ... 著者 Benjdia, A, Heil, K, Barends, T.R.M, Carell, T, Schlichting, I. 登録日 2012-06-06 公開日 2012-07-18 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme. Nucleic Acids Res., 40, 2012
4FHG	Spore photoproduct lyase C140S mutant 分子名称: 1,2-ETHANEDIOL, IRON/SULFUR CLUSTER, SULFATE ION, ... 著者 Benjdia, A, Heil, K, Barends, T.R.M, Carell, T, Schlichting, I. 登録日 2012-06-06 公開日 2012-07-18 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme. Nucleic Acids Res., 40, 2012
4FHF	Spore photoproduct lyase C140A mutant with dinucleoside spore photoproduct 分子名称: 1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-[[(5R)-1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-methyl-2,4-bis(oxidanylidene)-1,3-diazinan-5-yl]methyl]pyrimidine-2,4-dione, IRON/SULFUR CLUSTER, PYROPHOSPHATE 2-, ... 著者 Benjdia, A, Heil, K, Barends, T.R.M, Carell, T, Schlichting, I. 登録日 2012-06-06 公開日 2012-07-18 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme. Nucleic Acids Res., 40, 2012
5W5A	Crystal structure of Mycobacterium tuberculosis CRP-FNR family transcription factor Cmr (Rv1675c) 分子名称: CHLORIDE ION, HTH-type transcriptional regulator Cmr, SULFATE ION 著者 Cheung, J, Cassidy, M, Ginter, C, Ranganathan, S, Pata, D.J, McDonough, K.A. 登録日 2017-06-14 公開日 2017-12-13 最終更新日 2019-01-09 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Novel structural features drive DNA binding properties of Cmr, a CRP family protein in TB complex mycobacteria. Nucleic Acids Res., 46, 2018
5W5B	Crystal structure of Mycobacterium tuberculosis CRP-FNR family transcription factor Cmr (Rv1675c), truncated construct 分子名称: CHLORIDE ION, HTH-type transcriptional regulator Cmr 著者 Cheung, J, Cassidy, M, Ginter, C, Ranganathan, S, Pata, D.J, McDonough, K.A. 登録日 2017-06-14 公開日 2017-12-13 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Novel structural features drive DNA binding properties of Cmr, a CRP family protein in TB complex mycobacteria. Nucleic Acids Res., 46, 2018
6IUB	Structure of Helicobacter pylori Soj protein 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SpoOJ regulator (Soj) 著者 Chu, C.H, Yen, C.Y, Sun, Y.J. 登録日 2018-11-28 公開日 2019-02-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.902 Å) 主引用文献 Crystal structures of HpSoj-DNA complexes and the nucleoid-adaptor complex formation in chromosome segregation. Nucleic Acids Res., 47, 2019
6ZY6	Cryo-EM structure of the Human topoisomerase II alpha DNA-binding/cleavage domain in State 2 分子名称: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*CP*GP*CP*GP*CP*AP*TP*CP*GP*TP*CP*AP*TP*CP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*GP*AP*TP*GP*AP*CP*GP*AP*TP*G)-3'), ... 著者 Vanden Broeck, A, Lamour, V. 登録日 2020-07-30 公開日 2021-05-26 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural basis for allosteric regulation of Human Topoisomerase II alpha. Nat Commun, 12, 2021
4EIK	Crystal Structure of the Human Fyn SH3 domain in complex with the synthetic peptide VSL12 分子名称: SODIUM ION, Tyrosine-protein kinase Fyn, VSL12 peptide 著者 Camara-Artigas, A. 登録日 2012-04-05 公開日 2013-04-10 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystallization of and selenomethionine phasing strategy for a SETMAR-DNA complex. Acta Crystallogr F Struct Biol Commun, 72, 2016
6ZY5	Cryo-EM structure of the Human topoisomerase II alpha DNA-binding/cleavage domain in State 1 分子名称: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*CP*GP*CP*GP*CP*AP*TP*CP*GP*TP*CP*AP*TP*CP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*GP*AP*TP*GP*AP*CP*GP*AP*TP*G)-3'), ... 著者 Vanden Broeck, A, Lamour, V. 登録日 2020-07-30 公開日 2021-05-26 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural basis for allosteric regulation of Human Topoisomerase II alpha. Nat Commun, 12, 2021
6LTP	Crystal structure of Cas12i2 binary complex 分子名称: Cas12i2, crRNA (56-mer RNA) 著者 Huang, X, Sun, W, Cheng, Z, Chen, M, Li, X, Wang, J, Sheng, G, Gong, W, Wang, Y. 登録日 2020-01-23 公開日 2020-10-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural basis for two metal-ion catalysis of DNA cleavage by Cas12i2. Nat Commun, 11, 2020
2MAM	Solution structure of the interdigitated double Tudor domain of RBBP1 分子名称: AT-rich interactive domain-containing protein 4A 著者 Gong, W, Feng, Y. 登録日 2013-07-15 公開日 2014-01-15 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Retinoblastoma-binding protein 1 has an interdigitated double Tudor domain with DNA binding activity. J.Biol.Chem., 289, 2014

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