Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QET
DownloadVisualize
BU of 7qet by Molmil
human Connexin 26 dodecamer at 20mmHg PCO2, pH7.4
分子名称: DODECYL-BETA-D-MALTOSIDE, Gap junction beta-2 protein, PHOSPHATIDYLETHANOLAMINE
著者Brotherton, D.H, Cameron, A.D, Savva, C.G, Ragan, T.J.
登録日2021-12-03
公開日2022-03-30
最終更新日2022-05-18
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Conformational changes and CO 2 -induced channel gating in connexin26.
Structure, 30, 2022
8OFN
DownloadVisualize
BU of 8ofn by Molmil
Structure of the yellow fever virus (Asibi strain) dimeric envelope protein
分子名称: Envelope glycoprotein, SULFATE ION
著者Covernton, E, Vaney, M.C, Barba-Spaeth, G, Rey, F.A.
登録日2023-03-16
公開日2023-08-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.48 Å)
主引用文献New insight into flavivirus maturation from structure/function studies of the yellow fever virus envelope protein complex.
Mbio, 14, 2023
3LYA
DownloadVisualize
BU of 3lya by Molmil
Crystal structure of the periplasmic domain of CadC in the presence of K2ReCl6
分子名称: Transcriptional activator cadC, rhenium (IV) hexachloride
著者Eichinger, A, Skerra, A.
登録日2010-02-26
公開日2011-02-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the sensory domain of Escherichia coli CadC, a member of the ToxR-like protein family.
Protein Sci., 20, 2011
4JS5
DownloadVisualize
BU of 4js5 by Molmil
Crystal structure of E. coli Exonuclease I in complex with a dT13 oligonucleotide
分子名称: Exodeoxyribonuclease I, SULFATE ION, dT13 oligonucleotide
著者Bell, C.E.
登録日2013-03-22
公開日2013-05-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structures of Escherichia coli exonuclease I in complex with single-stranded DNA provide insights into the mechanism of processive digestion.
Nucleic Acids Res., 41, 2013
3MAT
DownloadVisualize
BU of 3mat by Molmil
E.COLI METHIONINE AMINOPEPTIDASE TRANSITION-STATE INHIBITOR COMPLEX
分子名称: COBALT (II) ION, METHIONINE AMINOPEPTIDASE, SODIUM ION, ...
著者Lowther, W.T, Orville, A.M, Madden, D.T, Lim, S, Rich, D.H, Matthews, B.W.
登録日1999-03-29
公開日1999-06-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Escherichia coli methionine aminopeptidase: implications of crystallographic analyses of the native, mutant, and inhibited enzymes for the mechanism of catalysis.
Biochemistry, 38, 1999
7QQE
DownloadVisualize
BU of 7qqe by Molmil
Nuclear factor one X - NFIX in P41212
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Nuclear factor 1 X-type, ZINC ION
著者Lapi, M, Chaves-Sanjuan, A, Gourlay, L.J, Tiberi, M, Polentarutti, M, Demitri, N, Bais, G, Nardini, M.
登録日2022-01-07
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Nuclear factor one X - NFIX in P41212
To Be Published
4K7C
DownloadVisualize
BU of 4k7c by Molmil
Crystal structure of pepw from lactobacillus rhamnosis hn001 (dr20) determined as the selenomet derivative
分子名称: Aminopeptidase C, GLYCEROL
著者Webby, C, Knapp, K.M, Anderson, B.F, Norris, G.E.
登録日2013-04-16
公開日2013-06-19
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Crystal structure of pepw from lactobacillus rhamnosis hn001 (dr20) determined as the selenomet derivative
TO BE PUBLISHED
3NEC
DownloadVisualize
BU of 3nec by Molmil
Crystal Structure of Toxoplasma gondii Profilin
分子名称: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Inflammatory profilin, SULFATE ION
著者Kucera, K, Modis, Y.
登録日2010-06-08
公開日2010-09-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-based analysis of Toxoplasma gondii profilin: a parasite-specific motif is required for recognition by Toll-like receptor 11.
J.Mol.Biol., 403, 2010
7YNF
DownloadVisualize
BU of 7ynf by Molmil
CCA-bound alpha-synuclein fibrils
分子名称: Alpha-synuclein, copper;trisodium;18-(2-carboxylatoethyl)-20-(carboxylatomethyl)-12-ethenyl-7-ethyl-3,8,13,17-tetramethyl-17,18-dihydroporphyrin-21,23-diide-2-carboxylate
著者Tao, Y.Q, Zhao, Q.Y, Liu, C, Li, D.
登録日2022-07-30
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献CCA-bound alpha-synuclein fibrils
To Be Published
7ZJR
DownloadVisualize
BU of 7zjr by Molmil
X-ray structure of the periplasmic region of PilJ from P. aeruginosa
分子名称: Protein PilJ
著者Pierrat, X, Pojer, F, Persat, A.
登録日2022-04-11
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.50312161 Å)
主引用文献X-ray structure of the periplasmic region of PilJ from P. aeruginosa
To Be Published
8A9L
DownloadVisualize
BU of 8a9l by Molmil
Cryo-EM structure of alpha-synuclein filaments from Parkinson's disease and dementia with Lewy bodies
分子名称: Alpha-synuclein, Unknown fragment
著者Yang, Y, Shi, Y, Schweighauser, M, Zhang, X.J, Kotecha, A, Murzin, A.G, Garringer, H.J, Cullinane, P, Saito, Y, Foroud, T, Warner, T.T, Hasegawa, K, Vidal, R, Murayama, S, Revesz, T, Ghetti, B, Hasegawa, M, Lashley, T, Scheres, H.W.S, Goedert, M.
登録日2022-06-28
公開日2022-08-31
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Structures of alpha-synuclein filaments from human brains with Lewy pathology.
Nature, 610, 2022
8ADW
DownloadVisualize
BU of 8adw by Molmil
Lipidic alpha-synuclein fibril - polymorph L1C
分子名称: Alpha-synuclein
著者Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
登録日2022-07-11
公開日2022-10-12
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
8ADU
DownloadVisualize
BU of 8adu by Molmil
Lipidic alpha-synuclein fibril - polymorph L1A
分子名称: Alpha-synuclein
著者Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
登録日2022-07-11
公開日2022-10-12
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
3GHG
DownloadVisualize
BU of 3ghg by Molmil
Crystal Structure of Human Fibrinogen
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A knob, B knob, ...
著者Doolittle, R.F, Kollman, J.M, Sawaya, M.R, Pandi, L, Riley, M.
登録日2009-03-03
公開日2009-05-19
最終更新日2023-05-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of human fibrinogen.
Biochemistry, 48, 2009
8AEX
DownloadVisualize
BU of 8aex by Molmil
Lipidic alpha-synuclein fibril - polymorph L3A
分子名称: Alpha-synuclein
著者Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
登録日2022-07-14
公開日2022-10-12
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
8ADV
DownloadVisualize
BU of 8adv by Molmil
Lipidic alpha-synuclein fibril - polymorph L1B
分子名称: Alpha-synuclein
著者Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
登録日2022-07-11
公開日2022-10-12
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
8ADS
DownloadVisualize
BU of 8ads by Molmil
Lipidic alpha-synuclein fibril - polymorph L2B
分子名称: Alpha-synuclein
著者Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
登録日2022-07-11
公開日2022-10-12
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
3S9A
DownloadVisualize
BU of 3s9a by Molmil
Russell's viper venom serine proteinase, RVV-V (closed-form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Vipera russelli proteinase RVV-V gamma
著者Nakayama, D, Ben Ammar, Y, Takeda, S.
登録日2011-06-01
公開日2011-09-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of coagulation factor V recognition for cleavage by RVV-V
Febs Lett., 585, 2011
8BQW
DownloadVisualize
BU of 8bqw by Molmil
Cryo-EM structure of alpha-synuclein filaments doublet from Juvenile-onset synucleinopathy
分子名称: Alpha-synuclein, Unknown protein
著者Yang, Y, Garringer, J.H, Shi, Y, Lovestam, S, Peak-Chew, S.Y, Zhang, X.J, Kotecha, A, Bacioglu, M, Koto, A, Takao, M, Spillantini, G.M, Ghetti, B, Vidal, R, Murzin, G.A, Scheres, H.W.S, Goedert, M.
登録日2023-01-18
公開日2023-02-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献New SNCA mutation and structures of alpha-synuclein filaments from juvenile-onset synucleinopathy.
Acta Neuropathol, 145, 2023
8BQV
DownloadVisualize
BU of 8bqv by Molmil
Cryo-EM structure of alpha-synuclein singlet filament from Juvenile-onset synucleinopathy
分子名称: Alpha-synuclein, Unknown protein
著者Yang, Y, Garringer, J.H, Shi, Y, Lovestam, S, Peak-Chew, S.Y, Zhang, X.J, Kotecha, A, Bacioglu, M, Koto, A, Takao, M, Spillantini, G.M, Ghetti, B, Vidal, R, Murzin, G.A, Scheres, H.W.S, Goedert, M.
登録日2023-01-18
公開日2023-02-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献New SNCA mutation and structures of alpha-synuclein filaments from juvenile-onset synucleinopathy.
Acta Neuropathol, 145, 2023
8A4L
DownloadVisualize
BU of 8a4l by Molmil
Lipidic alpha-synuclein fibril - polymorph L2A
分子名称: Alpha-synuclein
著者Frieg, B, Antonschmidt, L, Dienemann, C, Geraets, J.A, Najbauer, E.E, Matthes, D, de Groot, B.L, Andreas, L.B, Becker, S, Griesinger, C, Schroeder, G.F.
登録日2022-06-12
公開日2022-08-17
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献The 3D structure of lipidic fibrils of alpha-synuclein.
Nat Commun, 13, 2022
3WC5
DownloadVisualize
BU of 3wc5 by Molmil
Carboxypeptidase B in complex with DD9
分子名称: (2R)-7-amino-2-(selanylmethyl)heptanoic acid, CACODYLATE ION, Carboxypeptidase B, ...
著者Yoshimoto, N, Itoh, T, Inaba, Y, Yamamoto, K.
登録日2013-05-24
公開日2013-10-02
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for inhibition of carboxypeptidase B by selenium-containing inhibitor: selenium coordinates to zinc in enzyme.
J.Med.Chem., 56, 2013
3WC7
DownloadVisualize
BU of 3wc7 by Molmil
Carboxypeptidase B in complex with EF6265
分子名称: (2S)-7-amino-2-{[(R)-hydroxy{(1R)-2-methyl-1-[(3-phenylpropanoyl)amino]propyl}phosphoryl]methyl}heptanoic acid, Carboxypeptidase B, ZINC ION
著者Yoshimoto, N, Itoh, T, Inaba, Y, Yamamoto, K.
登録日2013-05-24
公開日2013-10-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for inhibition of carboxypeptidase B by selenium-containing inhibitor: selenium coordinates to zinc in enzyme.
J.Med.Chem., 56, 2013
3WAB
DownloadVisualize
BU of 3wab by Molmil
Carboxypeptidase B in complex with DD2
分子名称: (2R)-7-amino-2-(sulfanylmethyl)heptanoic acid, CACODYLATE ION, Carboxypeptidase B, ...
著者Yoshimoto, N, Itoh, T, Inaba, Y, Yamamoto, K.
登録日2013-05-01
公開日2013-10-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.154 Å)
主引用文献Structural basis for inhibition of carboxypeptidase B by selenium-containing inhibitor: selenium coordinates to zinc in enzyme.
J.Med.Chem., 56, 2013
3WC6
DownloadVisualize
BU of 3wc6 by Molmil
Carboxypeptidase B in complex with 2nd zinc
分子名称: ACETATE ION, Carboxypeptidase B, ZINC ION
著者Yoshimoto, N, Itoh, T, Inaba, Y, Yamamoto, K.
登録日2013-05-24
公開日2013-10-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for inhibition of carboxypeptidase B by selenium-containing inhibitor: selenium coordinates to zinc in enzyme.
J.Med.Chem., 56, 2013

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon