Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5V27
DownloadVisualize
BU of 5v27 by Molmil
2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-hydroxyanthranilate 3,4-dioxygenase, FE (II) ION
著者Dornevil, K, Liu, F, Liu, A.
登録日2017-03-02
公開日2018-03-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.352 Å)
主引用文献2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
To Be Published
8FTC
DownloadVisualize
BU of 8ftc by Molmil
Crystal structure of main protease of SARS-CoV-2 complexed with inhibitor
分子名称: (1R,2S,5S)-3-[N-(difluoroacetyl)-3-methyl-L-valyl]-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopiperidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
著者Chen, P, Khan, M.B, Lu, J, Arutyunova, E, Young, H.S, Lemieux, M.J.
登録日2023-01-11
公開日2023-12-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Effect of Deuteration and Homologation of the Lactam Ring of Nirmatrelvir on Its Biochemical Properties and Oxidative Metabolism.
Acs Bio Med Chem Au, 3, 2023
5V28
DownloadVisualize
BU of 5v28 by Molmil
2.72 angstrom crystal structure of P97A 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-hydroxyanthranilate 3,4-dioxygenase, FE (II) ION
著者Dornevil, K, Liu, F, Liu, A.
登録日2017-03-02
公開日2018-03-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.724 Å)
主引用文献2.72 angstrom crystal structure of P97A 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
To Be Published
1YIQ
DownloadVisualize
BU of 1yiq by Molmil
Molecular cloning and structural analysis of quinohemoprotein alcohol dehydrogenase ADHIIG from Pseudomonas putida HK5. Compariison to the other quinohemoprotein alcohol dehydrogenase ADHIIB found in the same microorganism.
分子名称: CALCIUM ION, HEME C, PYRROLOQUINOLINE QUINONE, ...
著者Toyama, H, Chen, Z.W, Fukumoto, M, Adachi, O, Matsushita, K, Mathews, F.S.
登録日2005-01-12
公開日2005-08-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular cloning and structural analysis of quinohemoprotein alcohol dehydrogenase ADH-IIG from Pseudomonas putida HK5
J.Mol.Biol., 352, 2005
4JKN
DownloadVisualize
BU of 4jkn by Molmil
Mercury Metallated Pseudomonas aeruginosa Azurin at 1.54 A
分子名称: Azurin, MERCURY (II) ION, NITRATE ION, ...
著者Zampino, A.P, Masters, F.M, Bladholm, E.L, Berry, S.B, Panzner, M.J, Ziegler, C.J.
登録日2013-03-10
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.536 Å)
主引用文献Mercury metallation of the copper protein azurin and structural insight into possible heavy metal reactivity.
J.Inorg.Biochem., 141, 2014
8FRW
DownloadVisualize
BU of 8frw by Molmil
Full-length mouse 5-HT3A receptor in complex with ALB148471, pre-activated
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[(1R,3S,5R)-1-azabicyclo[3.2.2]nonan-3-yl]-1,3,4,5-tetrahydro-6H-azepino[5,4,3-cd]indazol-6-one, 5-hydroxytryptamine receptor 3A
著者Felt, K.C, Chakrapani, S.
登録日2023-01-09
公開日2023-12-27
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Structural basis for partial agonism in 5-HT 3A receptors.
Nat.Struct.Mol.Biol., 31, 2024
8FRX
DownloadVisualize
BU of 8frx by Molmil
Full-length mouse 5-HT3A receptor in complex with SMP100, pre-activated
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[(1R,3S,4R)-1-azabicyclo[2.2.2]octan-3-yl]-1,3,4,5-tetrahydro-6H-azepino[5,4,3-cd]indazol-6-one, 5-hydroxytryptamine receptor 3A
著者Felt, K.C, Chakrapani, S.
登録日2023-01-09
公開日2023-12-27
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis for partial agonism in 5-HT 3A receptors.
Nat.Struct.Mol.Biol., 31, 2024
8FSZ
DownloadVisualize
BU of 8fsz by Molmil
Full-length mouse 5-HT3A receptor in complex with ALB148471, open-like
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[(1R,3S,5R)-1-azabicyclo[3.2.2]nonan-3-yl]-1,3,4,5-tetrahydro-6H-azepino[5,4,3-cd]indazol-6-one, 5-hydroxytryptamine receptor 3A
著者Felt, K.C, Chakrapani, S.
登録日2023-01-11
公開日2023-12-27
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献Structural basis for partial agonism in 5-HT 3A receptors.
Nat.Struct.Mol.Biol., 31, 2024
4GUV
DownloadVisualize
BU of 4guv by Molmil
TetX derivatized with Xenon
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, TetX2 protein, ...
著者Volkers, G, Palm, G.J, Panjikar, S, Hinrichs, W.
登録日2012-08-29
公開日2013-04-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Putative dioxygen-binding sites and recognition of tigecycline and minocycline in the tetracycline-degrading monooxygenase TetX.
Acta Crystallogr.,Sect.D, 69, 2013
7RML
DownloadVisualize
BU of 7rml by Molmil
Neisseria meningitidis Methylenetetrahydrofolate reductase in complex with FAD
分子名称: 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE
著者Pederick, J.L, Wegener, K.L, Salaemae, W, Bruning, J.B.
登録日2021-07-27
公開日2022-11-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Biochemical and structural characterization of meningococcal methylenetetrahydrofolate reductase.
Protein Sci., 32, 2023
4GYD
DownloadVisualize
BU of 4gyd by Molmil
Nostoc sp Cytochrome c6
分子名称: Cytochrome c6, HEME C
著者Skubak, P, Ubbink, M, Cavazzini, D, Rossi, G.L, Pannu, N.S.
登録日2012-09-05
公開日2013-09-11
最終更新日2019-10-02
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The dynamic complex of cytochrome c6 and cytochrome f studied with paramagnetic NMR spectroscopy
Biochim.Biophys.Acta, 1837, 2014
3P5B
DownloadVisualize
BU of 3p5b by Molmil
The structure of the LDLR/PCSK9 complex reveals the receptor in an extended conformation
分子名称: CALCIUM ION, Low density lipoprotein receptor variant, Proprotein convertase subtilisin/kexin type 9
著者Lo Surdo, P, Bottomley, M.J, Calzetta, A, Settembre, E.C, Cirillo, A, Pandit, S, Ni, Y, Hubbard, B, Sitlani, A, Carfi, A.
登録日2010-10-08
公開日2011-10-26
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Mechanistic implications for LDL receptor degradation from the PCSK9/LDLR structure at neutral pH.
Embo Rep., 12, 2011
4H0Z
DownloadVisualize
BU of 4h0z by Molmil
Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina with N-acetyl muramic acid at 2.0 Angstrom resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-beta-muramic acid, rRNA N-glycosidase
著者Singh, A, Pandey, S, Kushwaha, G.S, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
登録日2012-09-10
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina with N-acetyl muramic acid at 2.0 Angstrom resolution
TO BE PUBLISHED
3OS1
DownloadVisualize
BU of 3os1 by Molmil
PFV target capture complex (TCC) at 2.97 A resolution
分子名称: DNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*CP*CP*CP*GP*AP*GP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*CP*TP*CP*GP*GP*G)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*(2DA))-3'), ...
著者Maertens, G.N, Hare, S, Cherepanov, P.
登録日2010-09-08
公開日2010-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献The mechanism of retroviral integration from X-ray structures of its key intermediates
Nature, 468, 2010
5T72
DownloadVisualize
BU of 5t72 by Molmil
Human carboanhydrase F131C_C206S double mutant in complex with 2
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(HYDROXYMERCURY)BENZOIC ACID, 4-[(E)-(4-aminophenyl)diazenyl]benzenesulfonamide, ...
著者DuBay, K.H, Iwan, K, Osorio-Planes, L, Geissler, P, Groll, M, Trauner, D, Broichhagen, J.
登録日2016-09-02
公開日2017-09-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献A Predictive Approach for the Optical Control of Carbonic Anhydrase II Activity.
ACS Chem. Biol., 13, 2018
3SNL
DownloadVisualize
BU of 3snl by Molmil
Highly Potent, Selective, and Orally Active Phosphodiestarase 10A Inhibitors
分子名称: 6-chloro-3,4-dimethyl-1-(3-methylpyridin-4-yl)-8-(trifluoromethyl)imidazo[1,5-a]quinoxaline, MAGNESIUM ION, ZINC ION, ...
著者Malamas, M.S, Ni, Y, Erdei, J, Stange, H, Schindler, R, Lankau, H.-J, Grunwald, C, Fan, K.Y, Parris, K.D, Langen, B, Egerland, U, Hage, T, Marquis, K.L, Grauer, S, Brennan, J, Navarra, R, Graf, R, Harrison, B.L, Robichaud, A, Kronbach, T, Pangalos, M, Hofgen, N, Brandon, N.J.
登録日2011-06-29
公開日2011-10-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Highly Potent, Selective, and Orally Active Phosphodiesterase 10A Inhibitors.
J.Med.Chem., 54, 2011
3PPZ
DownloadVisualize
BU of 3ppz by Molmil
Crystal structure of CTR1 kinase domain in complex with staurosporine
分子名称: STAUROSPORINE, Serine/threonine-protein kinase CTR1
著者Mayerhofer, H, Panneerselvam, S, Mueller-Dieckmann, J.
登録日2010-11-25
公開日2011-12-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Protein kinase domain of CTR1 from Arabidopsis thaliana promotes ethylene receptor cross talk.
J. Mol. Biol., 415, 2012
1OC9
DownloadVisualize
BU of 1oc9 by Molmil
TRYPAREDOXIN II FROM C.FASCICULATA solved by MR
分子名称: TRYPAREDOXIN II
著者Leonard, G.A, Micossi, E, Hunter, W.N.
登録日2003-02-07
公開日2003-03-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Tryparedoxins from Crithidia Fasciculata and Trypanosoma Brucei: Photoreduction of the Redox Disulfide Using Synchrotron Radiation and Evidence for a Conformational Switch Implicated in Function
J.Biol.Chem., 278, 2003
8C5J
DownloadVisualize
BU of 8c5j by Molmil
Spatial structure of Lch-alpha peptide from two-component lantibiotic system Lichenicidin VK21
分子名称: Lantibiotic lichenicidin VK21 A1
著者Mineev, K.S, Paramonov, A.S, Arseniev, A.S, Ovchinnikova, T.V, Shenkarev, Z.O.
登録日2023-01-09
公開日2023-03-22
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Specific Binding of the alpha-Component of the Lantibiotic Lichenicidin to the Peptidoglycan Precursor Lipid II Predetermines Its Antimicrobial Activity.
Int J Mol Sci, 24, 2023
1O8X
DownloadVisualize
BU of 1o8x by Molmil
Mutant tryparedoxin-I Cys43Ala
分子名称: TRYPAREDOXIN
著者Alphey, M.S, Bond, C.S, Hunter, W.N.
登録日2002-12-09
公開日2003-04-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Tryparedoxins from Crithidia Fasciculata and Trypanosoma Brucei: Photoreduction of the Redox Disulfide Using Synchrotron Radiation and Evidence for a Conformational Switch Implicated in Function
J.Biol.Chem., 278, 2003
3GS0
DownloadVisualize
BU of 3gs0 by Molmil
Human transthyretin (TTR) complexed with (S)-3-(9H-fluoren-9-ylideneaminooxy)-2-methylpropanoic acid (inhibitor 16)
分子名称: (2S)-3-[(9H-fluoren-9-ylideneamino)oxy]-2-methylpropanoic acid, Transthyretin
著者Mohamedmohaideen, N.N, Palaninathan, S.K, Orlandini, E, Sacchettini, J.C.
登録日2009-03-26
公開日2009-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Novel transthyretin amyloid fibril formation inhibitors: synthesis, biological evaluation, and X-ray structural analysis.
Plos One, 4, 2009
1LA8
DownloadVisualize
BU of 1la8 by Molmil
Solution structure of the DNA hairpin 13-mer CGCGGTGTCCGCG
分子名称: 5'-D(*CP*GP*CP*GP*GP*TP*GP*TP*CP*CP*GP*CP*G)-3'
著者Weisenseel, J.P, Reddy, G.R, Marnett, L.J, Stone, M.P.
登録日2002-03-28
公開日2002-04-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the 1,N(2)-propanodeoxyguanosine adduct in a three-base DNA hairpin loop derived from a palindrome in the Salmonella typhimurium hisD3052 gene.
Chem.Res.Toxicol., 15, 2002
1H1D
DownloadVisualize
BU of 1h1d by Molmil
Catechol O-Methyltransferase
分子名称: 1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE, CATECHOL-O-METHYLTRANSFERASE, MAGNESIUM ION, ...
著者Archer, M, Rodrigues, M.L, Matias, P.M, Bonifacio, M.J, Learmonth, D.A, Soares-da-Silva, P, Carrondo, M.A.
登録日2002-07-12
公開日2003-07-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Kinetics and Crystal Structure of Catechol-O-Methyltransferase Complex with Co-Substrate and a Novel Inhibitor with Potential Therapeutic Application
Mol.Pharmacol., 62, 2002
5VII
DownloadVisualize
BU of 5vii by Molmil
Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist, 4-(3-fluoropropyl)phenyl-ACEPC
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-[(2R)-2-amino-2-carboxyethyl]-1-[4-(3-fluoropropyl)phenyl]-1H-pyrazole-3-carboxylic acid, DI(HYDROXYETHYL)ETHER, ...
著者Mou, T.-C, Conti, P, Pinto, A, Tamborini, L, Sprang, S.R, Hansen, K.B.
登録日2017-04-16
公開日2017-04-26
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.951 Å)
主引用文献Structural basis of subunit selectivity for competitive NMDA receptor antagonists with preference for GluN2A over GluN2B subunits.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3HSW
DownloadVisualize
BU of 3hsw by Molmil
Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with 2-methoxycyclohexa-2-5-diene-1,4-dione
分子名称: 2-methoxycyclohexa-2,5-diene-1,4-dione, CALCIUM ION, Phospholipase A2, ...
著者Dileep, K.V, Tintu, I, Karthe, P, Mandal, P.K, Haridas, M, Sadasivan, C.
登録日2009-06-11
公開日2009-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of porcine pancreatic phospholipase A2 in complex with 2-methoxycyclohexa-2-5-diene-1,4-dione
Frontiers in life sci., 2012

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon