Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6NVA
DownloadVisualize
BU of 6nva by Molmil
Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161.
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, SODIUM ION
著者Thomas, L.M, Chooback, L.
登録日2019-02-04
公開日2019-02-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161.
To Be Published
6MQH
DownloadVisualize
BU of 6mqh by Molmil
Crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) from Burkholderia mallei
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2018-10-09
公開日2018-10-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) from Burkholderia mallei
To be Published
6H7S
DownloadVisualize
BU of 6h7s by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant in complex with L-2-keto-3deoxy-gluconate
分子名称: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, L-2-keto-3deoxy-gluconate
著者Crennell, S.J, Danson, M.J, Royer, S.
登録日2018-07-31
公開日2019-08-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.202 Å)
主引用文献Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant
To Be Published
6H7R
DownloadVisualize
BU of 6h7r by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant
分子名称: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, GLYCEROL
著者Crennell, S.J, Danson, M.J, Royer, S.
登録日2018-07-31
公開日2019-08-14
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant
To Be Published
6H4E
DownloadVisualize
BU of 6h4e by Molmil
Proteus mirabilis N-acetylneuraminate lyase
分子名称: Putative N-acetylneuraminate lyase, SULFATE ION
著者North, R.A, Garcia-Bonete, M.J, Goyal, P, Katona, G, Dobson, R.C.J, Friemann, R.
登録日2018-07-21
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.561 Å)
主引用文献The structure of Proteus mirabilis N-acetylneuraminate lyase reveals an intermolecular disulphide bond
To Be Published
6H2S
DownloadVisualize
BU of 6h2s by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant, pyruvate complex
分子名称: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Crennell, S.J, Danson, M.J, Royer, S.
登録日2018-07-16
公開日2019-07-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant
To Be Published
6H2R
DownloadVisualize
BU of 6h2r by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant
分子名称: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, GLYCEROL, ...
著者Crennell, S.J, Danson, M.J, Royer, S.
登録日2018-07-16
公開日2019-07-31
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.574 Å)
主引用文献Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant
To Be Published
6GV2
DownloadVisualize
BU of 6gv2 by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y103F,Y130F,A198F variant in complex with L-2-keto, 3-deoxy-galactonate
分子名称: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, 3-DEOXY-D-ARABINO-HEXONIC ACID, ...
著者Crennell, S.J, Danson, M.J, Royer, S.
登録日2018-06-20
公開日2019-07-03
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
To Be Published
6GT8
DownloadVisualize
BU of 6gt8 by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
分子名称: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, 3-DEOXY-D-ARABINO-HEXONIC ACID
著者Crennell, S.J, Danson, M.J, Royer, S.
登録日2018-06-15
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
To Be Published
6GSO
DownloadVisualize
BU of 6gso by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
分子名称: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, GLYCEROL
著者Crennell, S.J, Danson, M.J, Royer, S.
登録日2018-06-15
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y132V,T157C variant
To Be Published
6G3Z
DownloadVisualize
BU of 6g3z by Molmil
Sulfolobus sulfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with D-KDPG
分子名称: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, 2-keto 3 deoxy 6 phospho gluconate, ISOPROPYL ALCOHOL
著者Crennell, S.J.
登録日2018-03-26
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Insights into the Substrate Specificity of Archaeal Entner-Doudoroff Aldolases: The Structures of Picrophilus torridus 2-Keto-3-deoxygluconate Aldolase and Sulfolobus solfataricus 2-Keto-3-deoxy-6-phosphogluconate Aldolase in Complex with 2-Keto-3-deoxy-6-phosphogluconate.
Biochemistry, 57, 2018
6DAQ
DownloadVisualize
BU of 6daq by Molmil
PhdJ bound to substrate intermediate
分子名称: PhdJ
著者Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
登録日2018-05-01
公開日2019-04-10
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6DAO
DownloadVisualize
BU of 6dao by Molmil
NahE WT selenomethionine
分子名称: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
著者Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
登録日2018-05-01
公開日2019-05-08
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.939 Å)
主引用文献Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6DAN
DownloadVisualize
BU of 6dan by Molmil
PhdJ WT 2 Angstroms resolution
分子名称: CHLORIDE ION, PhdJ
著者Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
登録日2018-05-01
公開日2019-04-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.047 Å)
主引用文献Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6ARH
DownloadVisualize
BU of 6arh by Molmil
Crystal structure of Human NAL at a resolution of 1.6 Angstrom
分子名称: ACETATE ION, N-acetylneuraminate lyase
著者Pearce, F.G, Bundela, R, Keown, J.R.
登録日2017-08-22
公開日2018-08-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of Human NAL at a resolution of 1.6 Angstrom
To Be Published
5ZKA
DownloadVisualize
BU of 5zka by Molmil
Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum complexed with Pyruvate
分子名称: 1,2-ETHANEDIOL, N-acetylneuraminate lyase, TRIETHYLENE GLYCOL
著者Kumar, J.P, Rao, H, Nayak, V, Ramaswamy, S.
登録日2018-03-23
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZJM
DownloadVisualize
BU of 5zjm by Molmil
Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum
分子名称: 1,2-ETHANEDIOL, N-acetylneuraminate lyase
著者Kumar, J.P, Rao, H, Nayak, V, Subramanian, R.
登録日2018-03-21
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.323 Å)
主引用文献Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
5UD6
DownloadVisualize
BU of 5ud6 by Molmil
Crystal structure of DHDPS from Cyanidioschyzon merolae with lysine bound
分子名称: CALCIUM ION, Dihydrodipicolinate synthase, LYSINE
著者Watkin, S, Keown, J.R, Pearce, F.G.
登録日2016-12-23
公開日2017-12-27
最終更新日2018-12-05
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of DHDPS from Cyanidioschyzon merolae with lysine bound
To Be Published
5T26
DownloadVisualize
BU of 5t26 by Molmil
Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Chooback, L, Thomas, L.M, Karsten, W.E, Fleming, C.D, Seabourn, P.
登録日2016-08-23
公開日2016-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
To Be Published
5T25
DownloadVisualize
BU of 5t25 by Molmil
Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE, SODIUM ION
著者Chooback, L, Thomas, L.M, Karsten, W.E, Fleming, C.D, Seabourn, P.
登録日2016-08-23
公開日2017-03-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.
To Be Published
5LKY
DownloadVisualize
BU of 5lky by Molmil
X-ray crystal structure of N-acetylneuraminic acid lyase in complex with pyruvate, with the phenylalanine at position 190 replaced with the non-canonical amino acid dihydroxypropylcysteine.
分子名称: DI(HYDROXYETHYL)ETHER, N-acetylneuraminate lyase
著者Windle, C.L, Trinh, C.H, Pearson, A.R, Nelson, A.S, Berry, A.
登録日2016-07-25
公開日2017-03-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Extending enzyme molecular recognition with an expanded amino acid alphabet.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5KZE
DownloadVisualize
BU of 5kze by Molmil
N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus
分子名称: GLYCEROL, N-acetylneuraminate lyase, SULFATE ION
著者North, R.A, Watson, A.J.A, Pearce, F.G, Muscroft-Taylor, A.C, Friemann, R, Fairbanks, A.J, Dobson, R.C.J.
登録日2016-07-25
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structure and inhibition of N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus.
FEBS Lett., 590, 2016
5KZD
DownloadVisualize
BU of 5kzd by Molmil
N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus with bound sialic acid alditol
分子名称: (2~{S},4~{S},5~{R},6~{R},7~{S},8~{R})-5-acetamido-2,4,6,7,8,9-hexakis(oxidanyl)nonanoic acid, N-acetylneuraminate lyase
著者North, R.A, Watson, A.J.A, Pearce, F.G, Muscroft-Taylor, A.C, Friemann, R, Fairbanks, A.J, Dobson, R.C.J.
登録日2016-07-25
公開日2017-01-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.334 Å)
主引用文献Structure and inhibition of N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus.
FEBS Lett., 590, 2016
5KTL
DownloadVisualize
BU of 5ktl by Molmil
Dihydrodipicolinate synthase from the industrial and evolutionarily important cyanobacteria Anabaena variabilis.
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, MANGANESE (II) ION
著者Christensen, J.B, Panjikar, S, Perugini, M.
登録日2016-07-11
公開日2016-11-30
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structure and Function of Cyanobacterial DHDPS and DHDPR.
Sci Rep, 6, 2016
5J5D
DownloadVisualize
BU of 5j5d by Molmil
Crystal structure of Dihydrodipicolinate Synthase from Mycobacterium tuberculosis in complex with alpha-ketopimelic acid
分子名称: 2-oxoheptanedioic acid, 4-hydroxy-tetrahydrodipicolinate synthase, SODIUM ION
著者Navratna, V, Gopal, B.
登録日2016-04-02
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Inhibition of Mycobacterium tuberculosis dihydrodipicolinate synthase by alpha-ketopimelic acid and its other structural analogues
Sci Rep, 6, 2016

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon