Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JUN
DownloadVisualize
BU of 6jun by Molmil
MsDpo4-DNA complex 3
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(P*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA polymerase IV, ...
著者Nair, D.T, Johnson, M.K.
登録日2019-04-15
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献A polar filter in DNA polymerases prevents ribonucleotide incorporation.
Nucleic Acids Res., 47, 2019
6JX5
DownloadVisualize
BU of 6jx5 by Molmil
Hect domain of AREL1
分子名称: Apoptosis-resistant E3 ubiquitin protein ligase 1
著者Sivaraman, J, Singh, S, Ng, J, Nayak, D.
登録日2019-04-22
公開日2019-12-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Structural insights into a HECT-type E3 ligase AREL1 and its ubiquitination activitiesin vitro.
J.Biol.Chem., 294, 2019
4KRD
DownloadVisualize
BU of 4krd by Molmil
Crystal Structure of Pho85-Pcl10 Complex
分子名称: Cyclin-dependent protein kinase PHO85, PHO85 cyclin-10
著者Quiocho, F.A, Zheng, F.
登録日2013-05-16
公開日2013-09-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.952 Å)
主引用文献New Structural Insights into Phosphorylation-free Mechanism for Full Cyclin-dependent Kinase (CDK)-Cyclin Activity and Substrate Recognition.
J.Biol.Chem., 288, 2013
4HBX
DownloadVisualize
BU of 4hbx by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with a quinazolin ligand
分子名称: 3-methyl-6-(pyrrolidin-1-ylsulfonyl)-3,4-dihydroquinazolin-2(1H)-one, Bromodomain-containing protein 4
著者Filippakopoulos, P, Picaud, S, Qi, J, Felletar, I, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Fish, P.V, Bunnage, M.E, Cook, A.S, Owen, D.R, Knapp, S, Structural Genomics Consortium (SGC)
登録日2012-09-28
公開日2012-10-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Identification of a Chemical Probe for Bromo and Extra C-Terminal Bromodomain Inhibition through Optimization of a Fragment-Derived Hit.
J.Med.Chem., 55, 2012
4O8V
DownloadVisualize
BU of 4o8v by Molmil
O-Acetyltransferase Domain of Pseudomonas putida AlgJ
分子名称: Alginate biosynthesis protein AlgJ
著者Ricer, T, Little, D.J, Whitney, J.C, Robinson, H, Howell, P.L.
登録日2013-12-30
公開日2014-10-01
実験手法X-RAY DIFFRACTION (1.815 Å)
主引用文献P. aeruginosa SGNH Hydrolase-Like Proteins AlgJ and AlgX Have Similar Topology but Separate and Distinct Roles in Alginate Acetylation.
Plos Pathog., 10, 2014
6LES
DownloadVisualize
BU of 6les by Molmil
3D domain-swapped dimer of the maltose-binding protein fused to a fragment of the focal adhesion kinase
分子名称: Maltose/maltodextrin-binding periplasmic protein,Focal adhesion kinase 1, SULFATE ION
著者Momin, A.A, Shahul Hameed, U.F, Arold, S.T.
登録日2019-11-26
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.004 Å)
主引用文献Passenger sequences can promote interlaced dimers in a common variant of the maltose-binding protein.
Sci Rep, 9, 2019
6LI6
DownloadVisualize
BU of 6li6 by Molmil
Crystal structure of MCR-1-S treated by Au(PEt3)Cl
分子名称: GOLD ION, Probable phosphatidylethanolamine transferase Mcr-1, TRIETHYLPHOSPHANE
著者Zhang, Q, Wang, M, Sun, H.
登録日2019-12-10
公開日2020-09-16
最終更新日2020-10-28
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Resensitizing carbapenem- and colistin-resistant bacteria to antibiotics using auranofin.
Nat Commun, 11, 2020
4OND
DownloadVisualize
BU of 4ond by Molmil
Ancestral Steroid Receptor 2 DBD helix mutant - ERE DNA complex
分子名称: 5'-D(*CP*CP*AP*GP*GP*TP*CP*AP*GP*AP*GP*TP*GP*AP*CP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*GP*TP*CP*AP*CP*TP*CP*TP*GP*AP*CP*CP*TP*G)-3', Ancestral SR2 Helix Mutant, ...
著者Ortlund, E.O, Murphy, M.N.
登録日2014-01-28
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.253 Å)
主引用文献Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module.
Cell(Cambridge,Mass.), 159, 2014
4OE5
DownloadVisualize
BU of 4oe5 by Molmil
Structure of Human ALDH4A1 Crystallized in Space Group P21
分子名称: Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial, MAGNESIUM ION, ...
著者Tanner, J.J.
登録日2014-01-11
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Studies of Yeast Delta (1)-Pyrroline-5-carboxylate Dehydrogenase (ALDH4A1): Active Site Flexibility and Oligomeric State.
Biochemistry, 53, 2014
6I05
DownloadVisualize
BU of 6i05 by Molmil
Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa
分子名称: Endolytic peptidoglycan transglycosylase RlpA
著者Alcorlo, M, Hermoso, J.A.
登録日2018-10-25
公開日2019-11-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.213 Å)
主引用文献Structural basis of denuded glycan recognition by SPOR domains in bacterial cell division.
Nat Commun, 10, 2019
4K9B
DownloadVisualize
BU of 4k9b by Molmil
Structure of Ternary Complex of cGAS with dsDNA and Bound c[G(2 ,5 )pA(3 ,5 )p]
分子名称: ADENOSINE MONOPHOSPHATE, Cyclic GMP-AMP synthase, DNA-F, ...
著者Gao, P, Wu, Y, Patel, D.J.
登録日2013-04-19
公開日2013-05-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase.
Cell(Cambridge,Mass.), 153, 2013
4KAM
DownloadVisualize
BU of 4kam by Molmil
X-ray crystal structure of O-acetylhomoserine sulfhydrylase MetC from Mycobacterium marinum ATCC BAA-535 / M
分子名称: O-acetylhomoserine sulfhydrylase MetC, SULFATE ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2013-04-22
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
4KCA
DownloadVisualize
BU of 4kca by Molmil
Crystal Structure of Endo-1,5-alpha-L-arabinanase from a Bovine Ruminal Metagenomic Library
分子名称: Endo-1,5-alpha-L-arabinanase, GLYCEROL, IODIDE ION, ...
著者Santos, C.R, Polo, C.C, Costa, M.C.M.F, Nascimento, A.F.Z, Wong, D.W.S, Murakami, M.T.
登録日2013-04-24
公開日2014-02-05
最終更新日2014-04-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
4MUA
DownloadVisualize
BU of 4mua by Molmil
Schistosoma mansoni (Blood Fluke) Sulfotransferase
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, SODIUM ION, Sulfotransferase
著者Valentim, C.L.L, Cioli, D, Chevalier, F.D, Cao, X, Taylor, A.B, Holloway, S.P, Pica-Mattoccia, L, Guidi, A, Basso, A, Tsai, I.J, Berriman, M, Carvalho-Queiroz, C, Almeida, M, Aguilar, H, Frantz, D.E, Hart, P.J, Anderson, T.J.C, LoVerde, P.T.
登録日2013-09-21
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Genetic and molecular basis of drug resistance and species-specific drug action in schistosome parasites.
Science, 342, 2013
4K96
DownloadVisualize
BU of 4k96 by Molmil
Structure of Binary Complex of cGAS with Bound dsDNA
分子名称: Cyclic GMP-AMP synthase, DNA-F, DNA-R, ...
著者Gao, P, Wu, Y, Patel, D.J.
登録日2013-04-19
公開日2013-05-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.084 Å)
主引用文献Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase.
Cell(Cambridge,Mass.), 153, 2013
4K98
DownloadVisualize
BU of 4k98 by Molmil
Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG
分子名称: Cyclic GMP-AMP synthase, DNA-F, DNA-R, ...
著者Gao, P, Wu, Y, Patel, D.J.
登録日2013-04-19
公開日2013-05-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase.
Cell(Cambridge,Mass.), 153, 2013
6J0I
DownloadVisualize
BU of 6j0i by Molmil
Structure of [Co2+-(Chromomycin A3)2]-d(TTGGCGAA)2 complex
分子名称: 1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
著者Satange, R.B, Chuang, C.Y, Hou, M.H.
登録日2018-12-24
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res., 47, 2019
4OMB
DownloadVisualize
BU of 4omb by Molmil
Phosphate binding protein
分子名称: PHOSPHATE ION, PLATINUM (II) ION, Phosphate binding protein
著者Neznansky, A, Opatowsky, Y.
登録日2014-01-27
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Pseudomonas aeruginosa phosphate transport protein PstS plays a phosphate-independent role in biofilm formation.
Faseb J., 28, 2014
4OV7
DownloadVisualize
BU of 4ov7 by Molmil
Ancestral Steroid Receptor 2 DBD helix mutant - SRE DNA complex
分子名称: 5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*GP*AP*GP*TP*GP*TP*TP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*CP*TP*CP*TP*GP*TP*TP*CP*TP*G)-3', Ancestral Steroid Receptor 2 DBD helix mutant, ...
著者Ortlund, E.A.
登録日2014-02-20
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module.
Cell(Cambridge,Mass.), 159, 2014
6J2P
DownloadVisualize
BU of 6j2p by Molmil
Crystal structure of Saccharomyces cerevisiae Spp1 in complex with H3K4me3
分子名称: COMPASS component SPP1, Histone H3, ZINC ION
著者He, C, Li, F.
登録日2019-01-02
公開日2019-09-11
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural basis for histone H3K4me3 recognition by the N-terminal domain of the PHD finger protein Spp1.
Biochem.J., 476, 2019
4NJN
DownloadVisualize
BU of 4njn by Molmil
Crystal Structure of E.coli GlpG at pH 4.5
分子名称: Rhomboid protease GlpG
著者Dickey, S.W, Baker, R.P, Cho, S, Urban, S.
登録日2013-11-11
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Proteolysis inside the Membrane Is a Rate-Governed Reaction Not Driven by Substrate Affinity.
Cell(Cambridge,Mass.), 155, 2013
4HOQ
DownloadVisualize
BU of 4hoq by Molmil
Crystal Structure of Full-Length Human IFIT5
分子名称: Interferon-induced protein with tetratricopeptide repeats 5
著者Abbas, Y.M, Pichlmair, A, Gorna, M.W, Superti-Furga, G, Nagar, B.
登録日2012-10-22
公開日2013-01-23
最終更新日2013-02-27
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural basis for viral 5'-PPP-RNA recognition by human IFIT proteins.
Nature, 494, 2013
4NN7
DownloadVisualize
BU of 4nn7 by Molmil
Cytokine receptor complex - Crystal form 2
分子名称: Cytokine receptor-like factor 2, Interleukin-7 receptor subunit alpha, Thymic stromal lymphopoietin
著者Verstraete, K, van Schie, L, Savvides, S.N.
登録日2013-11-16
公開日2014-03-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.775 Å)
主引用文献Structural basis of the proinflammatory signaling complex mediated by TSLP.
Nat.Struct.Mol.Biol., 21, 2014
3CZD
DownloadVisualize
BU of 3czd by Molmil
Crystal structure of human glutaminase in complex with L-glutamate
分子名称: GLUTAMIC ACID, GLYCEROL, Glutaminase kidney isoform, ...
著者Karlberg, T, Welin, M, Andersson, J, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wikstrom, M, Schuler, H, Structural Genomics Consortium (SGC)
登録日2008-04-29
公開日2008-07-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the allosteric inhibitory mechanism of human kidney-type glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism.
Proc.Natl.Acad.Sci.USA, 109, 2012
4KCB
DownloadVisualize
BU of 4kcb by Molmil
Crystal Structure of Exo-1,5-alpha-L-arabinanase from Bovine Ruminal Metagenomic Library
分子名称: Arabinan endo-1,5-alpha-L-arabinosidase, PHOSPHATE ION
著者Santos, C.R, Polo, C.C, Costa, M.C.M.F, Nascimento, A.F.Z, Wong, D.W.S, Murakami, M.T.
登録日2013-04-24
公開日2014-02-05
最終更新日2014-04-09
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon