PDB: 66507 件ウェブページステータス検索Chemie searchBIRD

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4CM1	Crystal structure of pteridine reductase 1 (PTR1) from Trypanosoma brucei in ternary complex with cofactor and inhibitor 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 5-(p-tolyl)-7H-pyrrolo[2,3-d]pyrimidine-2,4-diamine, ACETATE ION, ... 著者 Barrack, K.L, Hunter, W.N. 登録日 2014-01-15 公開日 2015-01-21 最終更新日 2017-07-05 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-Based Design and Synthesis of Antiparasitic Pyrrolopyrimidines Targeting Pteridine Reductase 1. J.Med.Chem., 57, 2014
8OQ0	Crystal structure of tailspike depolymerase (APK09_gp48) from Acinetobacter phage APK09 分子名称: DI(HYDROXYETHYL)ETHER, Tailspike protein 著者 Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Popova, A.V, Miroshnikov, K.A, Popov, V.O. 登録日 2023-04-10 公開日 2023-05-31 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii . Int J Mol Sci, 24, 2023
8OLX	MutSbeta bound to (CAG)2 DNA (canonical form) 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (25-MER), DNA mismatch repair protein Msh2, ... 著者 Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C. 登録日 2023-03-30 公開日 2023-05-24 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 MutSbeta bound to (CAG)2 DNA (canonical form) To Be Published
4CGQ	Full length Tah1 bound to HSP90 peptide SRMEEVD 分子名称: CHLORIDE ION, HEAT SHOCK PROTEIN HSP 90-ALPHA, TPR REPEAT-CONTAINING PROTEIN ASSOCIATED WITH HSP90 著者 Roe, S.M, Pal, M. 登録日 2013-11-26 公開日 2014-12-17 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Tah1 Helix-Swap Dimerization Prevents Mixed Hsp90 Co-Chaperone Complexes Acta Crystallogr.,Sect.F, 71, 2015
8OSI	Genetically encoded green ratiometric calcium indicator FNCaMP in calcium-bound state 分子名称: CALCIUM ION, mNeonGreen,Calmodulin,Protein kinase domain-containing protein 著者 Varfolomeeva, L.A, Boyko, K.M, Nikolaeva, A.Y, Subach, O.M, Subach, F.V. 登録日 2023-04-19 公開日 2023-05-24 最終更新日 2024-07-24 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 FNCaMP, ratiometric green calcium indicator based on mNeonGreen protein. Biochem.Biophys.Res.Commun., 665, 2023
1MJ3	Crystal Structure Analysis of rat enoyl-CoA hydratase in complex with hexadienoyl-CoA 分子名称: ENOYL-COA HYDRATASE, MITOCHONDRIAL, HEXANOYL-COENZYME A 著者 Bell, A.F, Feng, Y, Hofstein, H.A, Parikh, S, Wu, J, Rudolph, M.J, Kisker, C, Tonge, P.J. 登録日 2002-08-26 公開日 2002-09-24 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Stereoselectivity of Enoyl-CoA Hydratase Results from Preferential Activation of One of Two Bound Substrate Conformers Chem.Biol., 9, 2002
8OO5	Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 13 分子名称: 1,2-ETHANEDIOL, 1-[4-[4-(2-azanylethylamino)-2-[1-(4-chlorophenyl)cyclohexyl]quinazolin-7-yl]piperazin-1-yl]ethanone, DDB1- and CUL4-associated factor 1 著者 Schroeder, M, Renatus, M. 登録日 2023-04-04 公開日 2023-05-24 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Reinstating targeted protein degradation with DCAF1 PROTACs in CRBN PROTAC resistant settings Biorxiv, 2023
8P3L	The structure of thiocyanate dehydrogenase mutant form with Thr 169 replaced by Ala from Thioalkalivibrio paradoxus 分子名称: COPPER (II) ION, SULFATE ION, Twin-arginine translocation signal domain-containing protein 著者 Varfolomeeva, L.A, Polyakov, K.M, Komolov, A.S, Rakitina, T.V, Dergousova, N.I, Dorovatovskii, P.V, Boyko, K.M, Tikhonova, T.V, Popov, V.O. 登録日 2023-05-18 公開日 2023-05-31 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Improvement of the Diffraction Properties of Thiocyanate Dehydrogenase Crystals Crystallography Reports, 2023
8OMO	DNA-unbound MutSbeta-ATP complex (bent clamp form) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ... 著者 Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C. 登録日 2023-03-31 公開日 2023-05-24 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.43 Å) 主引用文献 DNA-unbound MutSbeta-ATP complex (bent clamp form) To Be Published
8OM5	DNA-free open form of MutSbeta 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ... 著者 Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C. 登録日 2023-03-31 公開日 2023-05-24 実験手法 ELECTRON MICROSCOPY (3.52 Å) 主引用文献 DNA-free open form of MutSbeta To Be Published
8OPZ	Crystal structure of a tailspike depolymerase (APK16_gp47) from Acinetobacter phage APK16 分子名称: GLYCEROL, Tailspike depolymerase (APK16_gp47) from Acinetobacter phage APK16 著者 Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Miroshnikov, K.A, Popov, V.O. 登録日 2023-04-10 公開日 2023-05-31 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii . Int J Mol Sci, 24, 2023
8STR	Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) varient in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)-4-fluorophenoxy)-7-fluoro-2-naphthonitrile (JLJ636), a non-nucleoside inhibitor 分子名称: 5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-7-fluoronaphthalene-2-carbonitrile, Reverse transcriptase/ribonuclease H, p51 RT 著者 Hollander, K, Chan, A.H, Jorgensen, W.L, Anderson, K.S. 登録日 2023-05-11 公開日 2023-11-29 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 Exploring novel HIV-1 reverse transcriptase inhibitors with drug-resistant mutants: A double mutant surprise. Protein Sci., 32, 2023
8SKJ	Crystal structure of a Nanobody bound to the V5 peptide. 分子名称: NbA1, V5 Epitope Tag Peptide 著者 Zaghal, M, Matte, K, Venes, A, Patel, S, Laroche, G, Sarvan, S, Joshi, M, Couture, J.F, Giguere, P.M. 登録日 2023-04-19 公開日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Development of a V5-tag-directed nanobody and its implementation as an intracellular biosensor of GPCR signaling. J.Biol.Chem., 299, 2023
8OMA	MutSbeta bound to 61bp homoduplex DNA 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ... 著者 Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C. 登録日 2023-03-31 公開日 2023-05-24 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.29 Å) 主引用文献 MutSbeta bound to 61bp homoduplex DNA To Be Published
1MPH	PLECKSTRIN HOMOLOGY DOMAIN FROM MOUSE BETA-SPECTRIN, NMR, 50 STRUCTURES 分子名称: BETA SPECTRIN 著者 Nilges, M, Macias, M.J, O'Donoghue, S.I, Oschkinat, H. 登録日 1997-04-23 公開日 1997-06-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrin. J.Mol.Biol., 269, 1997
8OMQ	DNA-unbound MutSbeta-ATP complex (straight clamp form) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ... 著者 Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C. 登録日 2023-03-31 公開日 2023-05-24 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.11 Å) 主引用文献 DNA-unbound MutSbeta-ATP complex (straight clamp form) To Be Published
8OQ1	Crystal structure of tailspike depolymerase (APK14_gp49) from Acinetobacter phage vB_AbaP_APK14 分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Shneider, M.M, Timoshina, O.Y, Miroshnikov, K.A, Popov, V.O. 登録日 2023-04-10 公開日 2023-06-07 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii. Int J Mol Sci, 24, 2023
4LUQ	Crystal structure of virulence effector Tse3 in complex with neutralizer Tsi3 分子名称: CALCIUM ION, Uncharacterized protein 著者 Wang, T, Li, L, Zhang, W. 登録日 2013-07-25 公開日 2013-09-18 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structural Insights on the Bacteriolytic and Self-protection Mechanism of Muramidase Effector Tse3 in Pseudomonas aeruginosa J.Biol.Chem., 288, 2013
8P3M	The structure of thiocyanate dehydrogenase mutant form with Lys 281 replaced by Ala from Thioalkalivibrio paradoxus 分子名称: BORIC ACID, COPPER (II) ION, SODIUM ION, ... 著者 Varfolomeeva, L.A, Polyakov, K.M, Komolov, A.S, Rakitina, T.V, Dergousova, N.I, Dorovatovskii, P.V, Boyko, K.M, Tikhonova, T.V, Popov, V.O. 登録日 2023-05-18 公開日 2023-06-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Improvement of the Diffraction Properties of Thiocyanate Dehydrogenase Crystals Crystallography Reports, 2023
4CMI	Crystal structure of pteridine reductase 1 (PTR1) from Trypanosoma brucei in ternary complex with cofactor and inhibitor 分子名称: 2-amino-6-(4-bromophenyl)-5-phenyl-3H-pyrrolo[2,3-d]pyrimidin-4(7H)-one, ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Barrack, K.L, Hunter, W.N. 登録日 2014-01-16 公開日 2015-01-21 最終更新日 2017-07-05 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-Based Design and Synthesis of Antiparasitic Pyrrolopyrimidines Targeting Pteridine Reductase 1. J.Med.Chem., 57, 2014
1M0D	Crystal Structure of Bacteriophage T7 Endonuclease I with a Wild-Type Active Site and Bound Manganese Ions 分子名称: Endodeoxyribonuclease I, MANGANESE (II) ION, SULFATE ION 著者 Hadden, J.M, Declais, A.C, Phillips, S.E, Lilley, D.M. 登録日 2002-06-12 公開日 2002-07-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Metal ions bound at the active site of the junction-resolving enzyme T7 endonuclease I. EMBO J., 21, 2002
4LP2	Crystal structure of monomeric ligand binding domain of S. typhimurium CysB, a LysR transcriptional regulator at 2.2A 分子名称: HTH-type transcriptional regulator CysB 著者 Mittal, M, Singh, A.K, Kumaran, S. 登録日 2013-07-15 公開日 2014-07-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of monomeric ligand binding domain of S. typhimurium CysB, a LysR transcriptional regulator at 2.2A To be Published
1M1Q	P222 oxidized structure of the tetraheme cytochrome c from Shewanella oneidensis MR1 分子名称: HEME C, SULFATE ION, small tetraheme cytochrome c 著者 Leys, D, Meyer, T.E, Tsapin, A.I, Nealson, K.H, Cusanovich, M.A, Van Beeumen, J.J. 登録日 2002-06-20 公開日 2002-08-14 最終更新日 2021-03-03 実験手法 X-RAY DIFFRACTION (0.97 Å) 主引用文献 Crystal structures at atomic resolution reveal the novel concept of 'electron-harvesting' as a role for the small tetraheme cytochrome c J.Biol.Chem., 277, 2002
4LQ2	Crystal structure of ligand binding domain of CysB, a LysR member from Salmonella typhimurium in complex with effector ligand, O-acetylserine 分子名称: HTH-type transcriptional regulator CysB, O-ACETYLSERINE 著者 Mittal, M, Singh, A.K, Kumaran, S. 登録日 2013-07-17 公開日 2014-08-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.694 Å) 主引用文献 Crystal structure of ligand binding domain of CysB, a LysR member from Salmonella typhimurium in complex with effector ligand, O-acetylserine TO BE PUBLISHED
1M46	CRYSTAL STRUCTURE OF MLC1P BOUND TO IQ4 OF MYO2P, A CLASS V MYOSIN 分子名称: IQ4 Motif from MYO2P, A Class V Myosin, Myosin light chain 著者 Terrak, M, Dominguez, R. 登録日 2002-07-02 公開日 2002-11-27 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.103 Å) 主引用文献 Two distinct myosin light chain structures are induced by specific variations within the bound IQ motifs-functional implications Embo J., 22, 2003

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