PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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5H1W	Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ketose-3-Epimerase with Mn2+ and L(+)-Erythrulose 分子名称: L-Erythrulose, MANGANESE (II) ION, PENTAETHYLENE GLYCOL, ... 著者 Cao, T.P, Shin, S.M, Lee, D.W, Lee, S.H. 登録日 2016-10-12 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.631 Å) 主引用文献 TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions Appl. Environ. Microbiol., 83, 2017
5E8N	The structure of the TEIPP associated Trh4 peptide in complex with H-2D(b) 分子名称: Beta-2-microglobulin, Ceramide synthase 5, GLYCEROL, ... 著者 Hafstrand, I, Doorduijn, E, Duru, A.D, Buratto, J, Oliveira, C.C, Sandalova, T, van Hall, T, Achour, A. 登録日 2015-10-14 公開日 2016-02-03 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 The MHC Class I Cancer-Associated Neoepitope Trh4 Linked with Impaired Peptide Processing Induces a Unique Noncanonical TCR Conformer. J Immunol., 196, 2016
3CWD	Molecular recognition of nitro-fatty acids by PPAR gamma 分子名称: (9E,12Z)-10-nitrooctadeca-9,12-dienoic acid, (9Z,12E)-12-nitrooctadeca-9,12-dienoic acid, Peroxisome proliferator-activated receptor gamma, ... 著者 Martynowski, D, Li, Y. 登録日 2008-04-21 公開日 2008-07-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Molecular recognition of nitrated fatty acids by PPAR gamma. Nat.Struct.Mol.Biol., 15, 2008
4Q1F	Human dCK C4S-S74E mutant in complex with UDP and the inhibitor 12R {N-{2-[5-(4-{(1R)-1-[(4,6-diaminopyrimidin-2-yl)sulfanyl]ethyl}-5-methyl-1,3-thiazol-2-yl)-2-methoxyphenoxy]ethyl}methanesulfonamide} 分子名称: Deoxycytidine kinase, N-{2-[5-(4-{(1R)-1-[(4,6-diaminopyrimidin-2-yl)sulfanyl]ethyl}-5-methyl-1,3-thiazol-2-yl)-2-methoxyphenoxy]ethyl}methanesulfonamide, URIDINE-5'-DIPHOSPHATE 著者 Nomme, J, Lavie, A. 登録日 2014-04-03 公開日 2014-11-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure-guided development of deoxycytidine kinase inhibitors with nanomolar affinity and improved metabolic stability. J.Med.Chem., 57, 2014
3CTT	Crystal complex of N-terminal Human Maltase-Glucoamylase with Casuarine 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CASUARINE, GLYCEROL, ... 著者 Sim, L, Rose, D.R. 登録日 2008-04-14 公開日 2009-02-24 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Total syntheses of casuarine and its 6-O-alpha-glucoside: complementary inhibition towards glycoside hydrolases of the GH31 and GH37 families Chemistry, 15, 2009
3CY6	Crystal Structure of E18Q DJ-1 分子名称: Protein DJ-1 著者 Witt, A.C, Lakshminarasimhan, M, Remington, B.C, Hasim, S, Pozharski, E, Wilson, M.A. 登録日 2008-04-25 公開日 2008-07-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Cysteine pKa depression by a protonated glutamic acid in human DJ-1. Biochemistry, 47, 2008
5GG5	Crystal structure of Mycobacterium smegmatis MutT1 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Hydrolase, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GG8	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-dGTP, 8-oxo-dGMP and pyrophosphate (II) 分子名称: 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Hydrolase, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GG9	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-GTP, 8-oxo-GMP and pyrophosphate 分子名称: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, Hydrolase, NUDIX family protein, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
3CZ7	Molecular Basis for the Autoregulation of the Protein Acetyl Transferase Rtt109 分子名称: ACETYL COENZYME *A, Regulator of Ty1 transposition protein 109 著者 Hoelz, A, Stavropoulos, P. 登録日 2008-04-28 公開日 2008-09-09 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular basis for the autoregulation of the protein acetyl transferase Rtt109 Proc.Natl.Acad.Sci.Usa, 105, 2008
5DQW	The crystal structure of Bacillus subtilis YpgQ in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, NICKEL (II) ION, Uncharacterized protein 著者 Jeon, Y.J, Song, W.S, Yoon, S.I. 登録日 2015-09-15 公開日 2016-04-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural and biochemical characterization of bacterial YpgQ protein reveals a metal-dependent nucleotide pyrophosphohydrolase J.Struct.Biol., 195, 2016
3CRK	Crystal structure of the PDHK2-L2 complex. 分子名称: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial, POTASSIUM ION, ... 著者 Green, T.J, Popov, K.M, Luo, M, Grigorian, A, Klyuyeva, A, Tuganova, A. 登録日 2008-04-07 公開日 2008-04-29 最終更新日 2025-03-26 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and functional insights into the molecular mechanisms responsible for the regulation of pyruvate dehydrogenase kinase 2. J.Biol.Chem., 283, 2008
5GGA	Crystal structure of Mycobacterium smegmatis MutT1 in complex with 8-oxo-GDP, 8-oxo-GMP and pyrophosphate 分子名称: Hydrolase, NUDIX family protein, MAGNESIUM ION, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
5GGD	Crystal structure of Mycobacterium smegmatis MutT1 in complex with phosphate and magnesium ions (excess magnesium, II) 分子名称: Hydrolase, NUDIX family protein, MAGNESIUM ION, ... 著者 Arif, S.M, Patil, A.G, Varshney, U, Vijayan, M. 登録日 2016-06-15 公開日 2017-04-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Biochemical and structural studies of Mycobacterium smegmatis MutT1, a sanitization enzyme with unusual modes of association Acta Crystallogr D Struct Biol, 73, 2017
4Q1D	Human dCK C4S-S74E mutant in complex with UDP and the inhibitor 9 {2-{[(1R)-1-{2-[3-(2-fluoroethoxy)-4-methoxyphenyl]-5-propyl-1,3-thiazol-4-yl}ethyl]sulfanyl}pyrimidine-4,6-diamine} 分子名称: (R)-2-((1-(2-(3-(2-fluoroethoxy)-4-methoxyphenyl)-5-propylthiazol-4-yl)ethyl)thio)pyrimidine-4,6-diamine, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE 著者 Nomme, J, Lavie, A. 登録日 2014-04-03 公開日 2015-02-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-guided development of deoxycytidine kinase inhibitors with nanomolar affinity and improved metabolic stability. J.Med.Chem., 57, 2014
3DAP	C. GLUTAMICUM DAP DEHYDROGENASE IN COMPLEX WITH NADP+ AND THE INHIBITOR 5S-ISOXAZOLINE 分子名称: (2S,5',S)-2-AMINO-3-(3-CARBOXY-2-ISOXAZOLIN-5-YL)PROPANOIC ACID, DIAMINOPIMELIC ACID DEHYDROGENASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Scapin, G, Cirilli, M, Reddy, S.G, Gao, Y, Vederas, J.C, Blanchard, J.S. 登録日 1997-12-29 公開日 1998-04-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Substrate and inhibitor binding sites in Corynebacterium glutamicum diaminopimelate dehydrogenase. Biochemistry, 37, 1998
3DAH	2.3 A crystal structure of ribose-phosphate pyrophosphokinase from Burkholderia pseudomallei 分子名称: ADENOSINE MONOPHOSPHATE, PHOSPHATE ION, Ribose-phosphate pyrophosphokinase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2008-05-29 公開日 2008-06-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Combining functional and structural genomics to sample the essential Burkholderia structome. Plos One, 8, 2013
1MRR	SUBSTITUTION OF MANGANESE FOR IRON IN RIBONUCLEOTIDE REDUCTASE FROM ESCHERICHIA COLI. SPECTROSCOPIC AND CRYSTALLOGRAPHIC CHARACTERIZATION 分子名称: MANGANESE (II) ION, MERCURY (II) ION, RIBONUCLEOTIDE REDUCTASE R1 PROTEIN 著者 Eklund, H, Nordlund, P. 登録日 1992-07-28 公開日 1994-01-31 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Substitution of manganese for iron in ribonucleotide reductase from Escherichia coli. Spectroscopic and crystallographic characterization. J.Biol.Chem., 267, 1992
5E6I	Crystal structure of TCR PF8 in complex with flu MP(58-66) epitope presented by HLA-A2 分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ... 著者 Gao, M, Mariuzza, R. 登録日 2015-10-09 公開日 2016-10-19 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Crystal structure of TCR PF8 in complex with flu MP(58-66) epitope presented by HLA-A2 To Be Published
3D9Z	Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties 分子名称: 5-(2-chlorophenyl)-1,3,4-thiadiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION 著者 Genis, C, Sippel, K.H, Case, N, Govindasamy, L, Agbandje-Mckenna, M, Mckenna, R. 登録日 2008-05-28 公開日 2009-03-03 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Design of a carbonic anhydrase IX active-site mimic to screen inhibitors for possible anticancer properties Biochemistry, 48, 2009
3DCS	Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties 分子名称: Carbonic anhydrase 2, N-(3-methyl-5-sulfamoyl-1,3,4-thiadiazol-2(3H)-ylidene)acetamide, ZINC ION 著者 Genis, C, Sippel, K.H, Case, N, Govindasamy, L, Agbandje-Mckenna, M, Mckenna, R. 登録日 2008-06-04 公開日 2009-03-03 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Design of a carbonic anhydrase IX active-site mimic to screen inhibitors for possible anticancer properties Biochemistry, 48, 2009
4Q1B	Human dCK C4S-S74E mutant in complex with UDP and the inhibitor 7 {N-(2-(3-(4-(((4,6-diaminopyrimidin-2-yl)thio)methyl)-5-propylthiazol-2-yl)phenoxy)ethyl)methanesulfonamide} 分子名称: Deoxycytidine kinase, N-(2-(3-(4-(((4,6-diaminopyrimidin-2-yl)thio)methyl)-5-propylthiazol-2-yl)phenoxy)ethyl)methanesulfonamide, URIDINE-5'-DIPHOSPHATE 著者 Nomme, J, Lavie, A. 登録日 2014-04-03 公開日 2015-02-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structure-guided development of deoxycytidine kinase inhibitors with nanomolar affinity and improved metabolic stability. J.Med.Chem., 57, 2014
3DK8	Catalytic cycle of human glutathione reductase near 1 A resolution 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, GLYCEROL, ... 著者 Berkholz, D.S, Faber, H.R, Savvides, S.N, Karplus, P.A. 登録日 2008-06-24 公開日 2008-08-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Catalytic cycle of human glutathione reductase near 1 A resolution. J.Mol.Biol., 382, 2008
8B9X	Chimeric protein of human UFM1 E3 ligase, UFL1, and DDRGK1 分子名称: CHLORIDE ION, DDRGK domain-containing protein 1,E3 UFM1-protein ligase 1 著者 Wiener, R, Isupov, M, banerjee, S. 登録日 2022-10-10 公開日 2023-10-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.066 Å) 主引用文献 Structural study of UFL1-UFC1 interaction uncovers the role of UFL1 N-terminal helix in ufmylation. Embo Rep., 24, 2023
3D8X	Crystal Structure of Saccharomyces cerevisiae NDPPH Dependent Thioredoxin Reductase 1 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Thioredoxin reductase 1 著者 Zhang, Z.Y, Bao, R, Yu, J, Chen, Y.X, Zhou, C.-Z. 登録日 2008-05-26 公開日 2008-12-09 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of Saccharomyces cerevisiae cytoplasmic thioredoxin reductase Trr1 reveals the structural basis for species-specific recognition of thioredoxin Biochim.Biophys.Acta, 1794, 2009

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