5E8N

The structure of the TEIPP associated Trh4 peptide in complex with H-2D(b)

Summary for 5E8N

• Entry DOI: 10.2210/pdb5e8n/pdb
• Descriptor: H-2 class I histocompatibility antigen, D-B alpha chain, Beta-2-microglobulin, Ceramide synthase 5, ... (6 entities in total)
• Functional Keywords: cancer, neo-epitope, tap-deficiency, teipp, mhc-i, sulfur-pi interactions, non-classical peptide binding, immune system
• Biological source: Mus musculus (House Mouse); More
• Cellular location: Membrane; Single-pass type I membrane protein: P01899; Secreted: P01887; Nucleus membrane ; Multi-pass membrane protein : Q9D6K9
• Total number of polymer chains: 12
• Total formula weight: 179582.05

Authors

Hafstrand, I.,Doorduijn, E.,Duru, A.D.,Buratto, J.,Oliveira, C.C.,Sandalova, T.,van Hall, T.,Achour, A. (deposition date: 2015-10-14, release date: 2016-02-03, Last modification date: 2024-01-10)

• Primary citation: Hafstrand, I.,Doorduijn, E.M.,Duru, A.D.,Buratto, J.,Oliveira, C.C.,Sandalova, T.,van Hall, T.,Achour, A.; The MHC Class I Cancer-Associated Neoepitope Trh4 Linked with Impaired Peptide Processing Induces a Unique Noncanonical TCR Conformer.; J Immunol., 196:2327-2334, 2016; PubMed: 26800871; DOI: 10.4049/jimmunol.1502249

Experimental method

X-RAY DIFFRACTION (2.25 Å)