Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3NBP
DownloadVisualize
BU of 3nbp by Molmil
HIV-1 reverse transcriptase with aminopyrimidine inhibitor 2
分子名称: 4-(4-{[4-(4-cyano-2,6-dimethylphenoxy)pyrimidin-2-yl]amino}piperidin-1-yl)benzenesulfonamide, MANGANESE (II) ION, Reverse transcriptase/ribonuclease H, ...
著者Harris, S.F, Villasenor, A.G.
登録日2010-06-03
公開日2010-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Discovery of piperidin-4-yl-aminopyrimidines as HIV-1 reverse transcriptase inhibitors. N-benzyl derivatives with broad potency against resistant mutant viruses.
Bioorg.Med.Chem.Lett., 20, 2010
3CB5
DownloadVisualize
BU of 3cb5 by Molmil
Crystal Structure of the S. pombe Peptidase Homology Domain of FACT complex subunit Spt16 (form A)
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FACT complex subunit spt16
著者Stuwe, T, Hothorn, M, Lejeune, E, Bortfeld-Miller, M, Scheffzek, K, Ladurner, A.G.
登録日2008-02-21
公開日2008-06-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The FACT Spt16 "peptidase" domain is a histone H3-H4 binding module
Proc.Natl.Acad.Sci.USA, 105, 2008
3UDL
DownloadVisualize
BU of 3udl by Molmil
3-heterocyclyl quinolone bound to HCV NS5B
分子名称: 3-(5-benzyl-1,2,4-oxadiazol-3-yl)-6-fluoro-1-[2-fluoro-4-(trifluoromethyl)benzyl]-7-(4-methylpiperazin-1-yl)quinolin-4(1H)-one, HCV NS5B polymerase
著者Somoza, J.R.
登録日2011-10-28
公開日2011-12-21
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.174 Å)
主引用文献Quinolones as HCV NS5B polymerase inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
1Y1T
DownloadVisualize
BU of 1y1t by Molmil
Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium at 1.77A Resolution
分子名称: GLYCEROL, SULFATE ION, Uridine phosphorylase
著者Gabdoulkhakov, A.G, Dontsova, M.V, Kachalova, G.S, Betzel, C, Ealick, S.E, Mikhailov, A.M.
登録日2004-11-19
公開日2005-11-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal Structures of Salmonella Typhimurium Uridine Phosphorylase in Native and Three Complexes Forms - with Uridine, Uracil and Sulfate.
To be Published
3H2L
DownloadVisualize
BU of 3h2l by Molmil
Crystal structure of HCV NS5B polymerase in complex with a novel bicyclic dihydro-pyridinone inhibitor
分子名称: N-{3-[(4aR,7aS)-1-(4-fluorobenzyl)-4-hydroxy-2-oxo-2,4a,5,6,7,7a-hexahydro-1H-cyclopenta[b]pyridin-3-yl]-1,1-dioxido-2H-1,2,4-benzothiadiazin-7-yl}methanesulfonamide, NS5B polymerase
著者Han, Q, Showalter, R.E, Zhou, Q, Kissinger, C.R.
登録日2009-04-14
公開日2009-12-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery of tricyclic 5,6-dihydro-1H-pyridin-2-ones as novel, potent, and orally bioavailable inhibitors of HCV NS5B polymerase.
Bioorg.Med.Chem.Lett., 19, 2009
1Y1R
DownloadVisualize
BU of 1y1r by Molmil
Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with Inhibitor and Phosphate Ion at 2.11A Resolution
分子名称: 2,2'-Anhydro-(1-beta-D-ribofuranosyl)uracil, PHOSPHATE ION, Uridine phosphorylase
著者Dontsova, M.V, Gabdoulkhakov, A.G, Kachalova, G.S, Betzel, C, Ealick, S.E, Mikhailov, A.M.
登録日2004-11-19
公開日2005-11-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystal Structures of Salmonella Typhimurium Uridine Phosphorylase in Complex with Inhibitor and Phosphate.
To be Published
1Y1Q
DownloadVisualize
BU of 1y1q by Molmil
Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with Uridine-5p-monophosphate and Sulfate Ion at 2.35A Resolution
分子名称: SULFATE ION, URIDINE-5'-MONOPHOSPHATE, Uridine phosphorylase
著者Gabdoulkhakov, A.G, Dontsova, M.V, Kachalova, G.S, Betzel, C, Ealick, S.E, Mikhailov, A.M.
登録日2004-11-19
公開日2005-11-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structures of Salmonella Typhimurium Uridine Phosphorylase in Native and Three Complexes Forms - with Uridine, Uracil and Sulfate.
To be Published
1Y1S
DownloadVisualize
BU of 1y1s by Molmil
Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with Uracil and Sulfate Ion at 2.55A Resolution
分子名称: SULFATE ION, URACIL, Uridine phosphorylase
著者Gabdoulkhakov, A.G, Dontsova, M.V, Kachalova, G.S, Betzel, C, Ealick, S.E, Mikhailov, A.M.
登録日2004-11-19
公開日2005-11-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal Structures of Salmonella Typhimurium Uridine Phosphorylase in Native and Three Complexes Forms - with Uridine, Uracil and Sulfate.
To be Published
2PGA
DownloadVisualize
BU of 2pga by Molmil
X-ray Structure of the Uridine Phosphorylase From SALMONELLA TYPHIMURIUM in Complex with Inhibitor and Phosphate and Potassium Ion at 1.74 A Resolution
分子名称: 2,2'-Anhydro-(1-beta-D-arabinofuranosyl)uracil, PHOSPHATE ION, POTASSIUM ION, ...
著者Timofeev, V.I, Lashkov, A.A, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M.
登録日2007-04-09
公開日2008-04-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献X-ray Structure of the Uridine Phosphorylase From SALMONELLA TYPHIMURIUM in Complex with Inhibitor and Phosphate and Potassium Ion at 1.74 A Resolution
To be Published
3OZE
DownloadVisualize
BU of 3oze by Molmil
Crystal Structure of human 5'-deoxy-5'-methyladenosine phosphorylase
分子名称: PHOSPHATE ION, S-methyl-5'-thioadenosine phosphorylase
著者Ho, M, Guan, R, Almo, S.C, Schramm, V.L.
登録日2010-09-24
公開日2011-09-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of human 5'-deoxy-5'-methyladenosine phosphorylase
to be published
6EXH
DownloadVisualize
BU of 6exh by Molmil
Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/succinate/(4R)-4-hydroxy-L-lysine
分子名称: 4-HYDROXY-LYSINE, FE (III) ION, GLYCEROL, ...
著者Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
登録日2017-11-08
公開日2018-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
9NWE
DownloadVisualize
BU of 9nwe by Molmil
E3 ligase UBR4-KCMF1-calmodulin complex
分子名称: CALCIUM ION, Calmodulin-1, E3 ubiquitin-protein ligase KCMF1, ...
著者Yang, Z, Rape, M.P.
登録日2025-03-22
公開日2025-06-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molecular basis of SIFI activity in the integrated stress response.
Nature, 2025
6EUO
DownloadVisualize
BU of 6euo by Molmil
Crystal structure of APO Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5
分子名称: D-MALATE, FE (III) ION, GLYCEROL, ...
著者Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
登録日2017-10-30
公開日2018-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
9UY3
DownloadVisualize
BU of 9uy3 by Molmil
Anamorelin bound growth hormone secretagogue receptor in complex with Gq
分子名称: 2-azanyl-N-[(2R)-1-[(3S)-3-[dimethylamino(methyl)carbamoyl]-3-(phenylmethyl)piperidin-1-yl]-3-(1H-indol-3-yl)-1-oxidanylidene-propan-2-yl]-2-methyl-propanamide, CHOLESTEROL, Engineered G-alpha-q subunit, ...
著者Wang, R, Sun, J, Liu, H, Guo, S, Zhang, Y, Hu, W, Wang, J, Liu, H, Zhuang, Y, Jiang, Y, Xie, X, Xu, H.E, Wang, Y.
登録日2025-05-14
公開日2025-07-02
実験手法ELECTRON MICROSCOPY (2.52 Å)
主引用文献Molecular recognition of two approved drugs Macimorelin and Anamorelin by the growth hormone secretagogue receptor.
Acta Pharmacol.Sin., 2025
6F07
DownloadVisualize
BU of 6f07 by Molmil
CBF3 Core Complex
分子名称: Centromere DNA-binding protein complex CBF3 subunit B, Suppressor of kinetochore protein 1, ZINC ION
著者Leber, V, Singleton, M.R.
登録日2017-11-17
公開日2017-12-13
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for assembly of the CBF3 kinetochore complex.
EMBO J., 37, 2018
9NWD
DownloadVisualize
BU of 9nwd by Molmil
Human E3 ligase UBR4-KCMF1-calmodulin complex (N-terminal)
分子名称: E3 ubiquitin-protein ligase UBR4
著者Yang, Z, Haakonsen, D.L, Heider, M, Witus, S.R, Zelter, A, Beschauner, T, MacCoss, M.J, Rape, M.
登録日2025-03-22
公開日2025-06-11
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Molecular basis of SIFI activity in the integrated stress response.
Nature, 2025
9V2N
DownloadVisualize
BU of 9v2n by Molmil
Macimorelin bound growth hormone secretagogue receptor in complex with Gq
分子名称: Engineered G-alpha-q subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Wang, R, Sun, J, Liu, H, Guo, S, Zhang, Y, Hu, W, Wang, J, Liu, H, Zhuang, Y, Jiang, Y, Xie, X, Xu, H, Wang, Y.
登録日2025-05-20
公開日2025-07-02
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Molecular recognition of two approved drugs Macimorelin and Anamorelin by the growth hormone secretagogue receptor.
Acta Pharmacol.Sin., 2025
5JJL
DownloadVisualize
BU of 5jjl by Molmil
Rho transcription termination factor bound to rU8 and 5 ADP-BeF3 molecules
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M.
登録日2016-04-24
公開日2016-11-16
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
7RYN
DownloadVisualize
BU of 7ryn by Molmil
CD1a-sulfatide-gdTCR complex
分子名称: (15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-15-ENAMIDE, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wegrecki, M, Le Nours, J, Rossjohn, J.
登録日2021-08-25
公開日2022-05-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Atypical sideways recognition of CD1a by autoreactive gamma delta T cell receptors.
Nat Commun, 13, 2022
7RYO
DownloadVisualize
BU of 7ryo by Molmil
CD1a-dideoxymycobactin-gdTCR complex
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, SULFATE ION, ...
著者Wegrecki, M, Le Nours, J, Rossjohn, J.
登録日2021-08-25
公開日2022-05-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Atypical sideways recognition of CD1a by autoreactive gamma delta T cell receptors.
Nat Commun, 13, 2022
6FLP
DownloadVisualize
BU of 6flp by Molmil
CryoEM structure of E.coli RNA polymerase paused elongation complex without RNA hairpin bound to NusA
分子名称: DNA (30-MER), DNA (39-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Guo, X, Weixlbaumer, A.
登録日2018-01-26
公開日2018-03-07
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural Basis for NusA Stabilized Transcriptional Pausing.
Mol. Cell, 69, 2018
7RYM
DownloadVisualize
BU of 7rym by Molmil
CD1a-endo-gdTCR complex
分子名称: Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, SULFATE ION, ...
著者Wegrecki, M, Le Nours, J, Rossjohn, J.
登録日2021-08-25
公開日2022-05-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Atypical sideways recognition of CD1a by autoreactive gamma delta T cell receptors.
Nat Commun, 13, 2022
6EUR
DownloadVisualize
BU of 6eur by Molmil
Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/alpha-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, GLYCEROL, ...
著者Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
登録日2017-10-31
公開日2018-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
6F2E
DownloadVisualize
BU of 6f2e by Molmil
Crystal structure of the APO Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1
分子名称: ACETIC ACID, L-lysine 3-hydroxylase
著者Isabet, T, Stura, E.A, Legrand, P, Zaparucha, A, Bastard, K.
登録日2017-11-24
公開日2018-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
6F20
DownloadVisualize
BU of 6f20 by Molmil
Complex between MTH1 and compound 1 (a 7-azaindole-4-ester derivative)
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, ACETATE ION, Ethyl 1H-pyrrolo[2,3-b]pyridine-4-carboxylate, ...
著者Viklund, J, Talagas, A, Tresaugues, L, Andersson, M, Ericsson, U, Forsblom, R, Ginman, T, Hallberg, K, Lindstrom, J, Persson, L, Silvander, C, Rahm, F.
登録日2017-11-23
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Creation of a Novel Class of Potent and Selective MutT Homologue 1 (MTH1) Inhibitors Using Fragment-Based Screening and Structure-Based Drug Design.
J. Med. Chem., 61, 2018

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon