Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8FQV
DownloadVisualize
BU of 8fqv by Molmil
apo ADC-30 beta-lactamase
分子名称: Beta-lactamase, PHOSPHATE ION
著者Powers, R.A, Wallar, B.J, June, C.M, Ruiz, V.J.
登録日2023-01-06
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023
8FQR
DownloadVisualize
BU of 8fqr by Molmil
Apo ADC-212 beta-lactamase
分子名称: Beta-lactamase, GLYCINE, PHOSPHATE ION
著者Powers, R.A, Wallar, B.J, June, C.M, Beardsley, T.J.
登録日2023-01-06
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023
5KS5
DownloadVisualize
BU of 5ks5 by Molmil
Structure of the C-terminal Helical Repeat Domain of Elongation Factor 2 Kinase
分子名称: Eukaryotic elongation factor 2 kinase
著者Piserchio, A, Will, N, Snyder, I, Ferguson, S.B, Giles, D.H, Dalby, K.N, Ghose, R.
登録日2016-07-07
公開日2016-09-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the C-Terminal Helical Repeat Domain of Eukaryotic Elongation Factor 2 Kinase.
Biochemistry, 55, 2016
8FQU
DownloadVisualize
BU of 8fqu by Molmil
ADC-219 in complex with boronic acid transition state inhibitor MB076
分子名称: 1-[(2R)-2-{2-[(5-amino-1,3,4-thiadiazol-2-yl)sulfanyl]acetamido}-2-boronoethyl]-1H-1,2,3-triazole-4-carboxylic acid, Beta-lactamase, DIMETHYL SULFOXIDE
著者Powers, R.A, Wallar, B.J, June, C.M, Maurer, O.L.
登録日2023-01-06
公開日2023-07-05
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023
4MOB
DownloadVisualize
BU of 4mob by Molmil
Acyl-Coenzyme A thioesterase 12 in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Acyl-coenzyme A thioesterase 12, COENZYME A
著者Swarbrick, C.M.D, Forwood, J.K.
登録日2013-09-12
公開日2014-07-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural basis for regulation of the human acetyl-CoA thioesterase 12 and interactions with the steroidogenic acute regulatory protein-related lipid transfer (START) domain.
J.Biol.Chem., 289, 2014
9GQY
DownloadVisualize
BU of 9gqy by Molmil
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 without any binding partner.
分子名称: Apoptosis-inducing factor 1, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Rothemann, R.A, Pavlenko, E.A, Gerlich, S, Grobushkin, P, Mostert, S, Stobbe, D, Racho, J, Stillger, K, Lapacz, K, Petrungaro, C, Dengjel, J, Neundorf, I, Bano, D, Mondal, M, Weiss, K, Ehninger, D, Nguyen, T.H.D, Poepsel, S.P, Riemer, J.
登録日2024-09-10
公開日2025-07-09
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Interaction with AK2A links AIFM1 to cellular energy metabolism.
Mol.Cell, 2025
8FQS
DownloadVisualize
BU of 8fqs by Molmil
ADC-212 in complex with boronic acid transition state inhibitor MB076
分子名称: 1-[(2R)-2-{2-[(5-amino-1,3,4-thiadiazol-2-yl)sulfanyl]acetamido}-2-boronoethyl]-1H-1,2,3-triazole-4-carboxylic acid, Beta-lactamase, DIMETHYL SULFOXIDE, ...
著者Powers, R.A, Wallar, B.J, June, C.M.
登録日2023-01-06
公開日2023-07-05
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum.
J.Med.Chem., 66, 2023
5Y6M
DownloadVisualize
BU of 5y6m by Molmil
Zika virus helicase in complex with ADP-AlF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Helicase domain from Genome polyprotein, ...
著者Yang, X.Y, Chen, C, Tian, H.L, Chi, H, Mu, Z.Y, Zhang, T.Q, Yang, K.L, Zhao, Q, Liu, X.H, Wang, Z.F, Ji, X.Y, Yang, H.T.
登録日2017-08-12
公開日2018-07-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Mechanism of ATP hydrolysis by the Zika virus helicase.
FASEB J., 32, 2018
5KR9
DownloadVisualize
BU of 5kr9 by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with Coumestrol
分子名称: Coumestrol, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-07-07
公開日2017-02-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
1N4D
DownloadVisualize
BU of 1n4d by Molmil
The Ligand-Free Structure of E coli BtuF, the Periplasmic Binding Protein for Vitamin B12
分子名称: Vitamin B12 transport protein btuF
著者Karpowich, N, Smith, P.C, Hunt, J.F.
登録日2002-10-30
公開日2003-03-11
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structures of the BtuF Periplasmic-binding Protein for Vitamin B12 Suggest a Functionally Important Reduction in Protein Mobility upon Ligand Binding
J.BIOL.CHEM., 278, 2003
7SZ4
DownloadVisualize
BU of 7sz4 by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - delta barrel mutant class-2
分子名称: Portal protein
著者Hou, C.-F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
登録日2021-11-25
公開日2022-03-30
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
9GR0
DownloadVisualize
BU of 9gr0 by Molmil
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 bound by AK2A.
分子名称: Adenylate kinase 2, mitochondrial, Apoptosis-inducing factor 1, ...
著者Rothemann, R.A, Pavlenko, E.A, Gerlich, S, Grobushkin, P, Mostert, S, Stobbe, D, Racho, J, Stillger, K, Lapacz, K, Petrungaro, C, Dengjel, J, Neundorf, I, Bano, D, Mondal, M, Weiss, K, Ehninger, D, Nguyen, T.H.D, Poepsel, S.P, Riemer, J.
登録日2024-09-10
公開日2025-07-09
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Interaction with AK2A links AIFM1 to cellular energy metabolism.
Mol.Cell, 2025
5DY1
DownloadVisualize
BU of 5dy1 by Molmil
Crystal of Selenomethionine substituted AmtR from Corynebacterium glutamicum
分子名称: CALCIUM ION, TetR family transcriptional regulator
著者Palanca, C, Rubio, V.
登録日2015-09-24
公開日2016-01-13
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.651 Å)
主引用文献Structure of AmtR, the global nitrogen regulator of Corynebacterium glutamicum, in free and DNA-bound forms.
Febs J., 283, 2016
7SZ6
DownloadVisualize
BU of 7sz6 by Molmil
Kinetically trapped Pseudomonas-phage PaP3 portal protein - delta barrel mutant class-3
分子名称: Portal protein
著者Hou, C.-F.D, Swanson, N.A, Li, F, Yang, R, Lokareddy, R.K, Cingolani, G.
登録日2021-11-25
公開日2022-03-30
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (6.24 Å)
主引用文献Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.
J.Mol.Biol., 434, 2022
4EWN
DownloadVisualize
BU of 4ewn by Molmil
Structure of HisF-D130V+D176V with bound rCdRP
分子名称: 1-(O-carboxy-phenylamino)-1-deoxy-D-ribulose-5-phosphate, Imidazole glycerol phosphate synthase subunit HisF
著者Reisinger, B, Bocola, M, Rajendran, C, List, F, Sterner, R.
登録日2012-04-27
公開日2012-12-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献A sugar isomerization reaction established on various (beta-alpha)8-barrel scaffolds is based on substrate-assisted catalysis
Protein Eng.Des.Sel., 25, 2012
5YO9
DownloadVisualize
BU of 5yo9 by Molmil
Crystal structure of KAS III from Acinetobacter baumannii
分子名称: 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein, COENZYME A, GLYCEROL
著者Lee, W.C, Jung, M, Lee, J, Kim, Y.
登録日2017-10-27
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Crystal structure of a novel KAS III from Acinetobacter baumannii
to be published
7T5G
DownloadVisualize
BU of 7t5g by Molmil
Structure of rabies virus phosphoprotein C-terminal domain, S210E mutant
分子名称: Phosphoprotein, SULFATE ION
著者Zhan, J, Metcalfe, R.D, Gooley, P.R, Griffin, M.D.W.
登録日2021-12-12
公開日2022-04-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular Basis of Functional Effects of Phosphorylation of the C-Terminal Domain of the Rabies Virus P Protein.
J.Virol., 96, 2022
4F2I
DownloadVisualize
BU of 4f2i by Molmil
Crystal structure of glutaredoxin-like NrdH from Mycobacterium tuberculosis
分子名称: Glutaredoxin NrdH, putative, NITRATE ION
著者Phulera, S, Mande, S.C.
登録日2012-05-08
公開日2013-05-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The Crystal Structure of Mycobacterium tuberculosis NrdH at 0.87 A Suggests a Possible Mode of Its Activity.
Biochemistry, 52, 2013
4MOC
DownloadVisualize
BU of 4moc by Molmil
Human Acyl-coenzyme A Thioesterase 12
分子名称: Acyl-coenzyme A thioesterase 12, COENZYME A
著者Swarbrick, C.M.D, Forwood, J.K.
登録日2013-09-12
公開日2014-07-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for regulation of the human acetyl-CoA thioesterase 12 and interactions with the steroidogenic acute regulatory protein-related lipid transfer (START) domain.
J.Biol.Chem., 289, 2014
4Y0Y
DownloadVisualize
BU of 4y0y by Molmil
Trypsin in complex with with BPTI
分子名称: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
著者Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B.
登録日2015-02-06
公開日2015-06-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Fluorine teams up with water to restore inhibitor activity to mutant BPTI.
Chem Sci, 6, 2015
3DW0
DownloadVisualize
BU of 3dw0 by Molmil
Crystal structure of the class A carbapenemase KPC-2 at 1.6 angstrom resolution
分子名称: Class A carbapenemase KPC-2
著者Petrella, S, Ziental-Gelus, N, Mayer, C, Jarlier, V, Sougakoff, W.
登録日2008-07-21
公開日2008-07-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Genetic and structural insights into the dissemination potential of the extremely broad-spectrum class A beta-lactamase KPC-2 identified in an Escherichia coli strain and an Enterobacter cloacae strain isolated from the same patient in France.
Antimicrob.Agents Chemother., 52, 2008
5E5Y
DownloadVisualize
BU of 5e5y by Molmil
Quasi-racemic snakin-1 in P1 before radiation damage
分子名称: 1,2-ETHANEDIOL, D- snakin-1, FORMIC ACID, ...
著者Yeung, H, Squire, C.J, Yosaatmadja, Y, Panjikar, S, Baker, E.N, Harris, P.W.R, Brimble, M.A.
登録日2015-10-09
公開日2016-05-18
最終更新日2025-04-02
実験手法X-RAY DIFFRACTION (1.506 Å)
主引用文献Radiation Damage and Racemic Protein Crystallography Reveal the Unique Structure of the GASA/Snakin Protein Superfamily.
Angew.Chem.Int.Ed.Engl., 55, 2016
8V7E
DownloadVisualize
BU of 8v7e by Molmil
Human DNA polymerase eta-DNA-araC-ended primer-dAMPNPP ternary complex with Mg2+
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*C)-3'), DNA (5'-D(*CP*AP*TP*TP*GP*TP*GP*AP*CP*GP*CP*T)-3'), ...
著者Chang, C, Gao, Y.
登録日2023-12-04
公開日2024-05-15
最終更新日2025-06-04
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Sugar ring alignment and dynamics underline cytarabine and gemcitabine inhibition on Pol eta catalyzed DNA synthesis.
J.Biol.Chem., 300, 2024
9GQZ
DownloadVisualize
BU of 9gqz by Molmil
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 engaged to MIA40.
分子名称: Apoptosis-inducing factor 1, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Rothemann, R.A, Pavlenko, E.A, Gerlich, S, Grobushkin, P, Mostert, S, Stobbe, D, Racho, J, Stillger, K, Lapacz, K, Petrungaro, C, Dengjel, J, Neundorf, I, Bano, D, Mondal, M, Weiss, K, Ehninger, D, Nguyen, T.H.D, Poepsel, S.P, Riemer, J.
登録日2024-09-10
公開日2025-07-09
実験手法ELECTRON MICROSCOPY (2.36 Å)
主引用文献Interaction with AK2A links AIFM1 to cellular energy metabolism.
Mol.Cell, 2025
6XJ6
DownloadVisualize
BU of 6xj6 by Molmil
Crystal structure of the helical cell shape determining protein Pgp2 from Campylobacter jejuni
分子名称: Pgp2
著者Lin, C.S, Chan, A.C, Murphy, M.E.
登録日2020-06-23
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.497 Å)
主引用文献Peptidoglycan binding by a pocket on the accessory NTF2-domain of Pgp2 directs helical cell shape of Campylobacter jejuni.
J.Biol.Chem., 296, 2021

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon