PDB: 222415 件ウェブページステータス検索Chemie searchBIRD

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3OMF	Crystal structure of a histidine triad family protein from Entamoeba histolytica, bound to AMP 分子名称: ADENOSINE MONOPHOSPHATE, Putative histidine triad family protein, ZINC ION 著者 SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2010-08-26 公開日 2010-09-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structures of a histidine triad family protein from Entamoeba histolytica bound to sulfate, AMP and GMP. Acta Crystallogr F Struct Biol Commun, 71, 2015
3TPJ	APO structure of BACE1 分子名称: Beta-secretase 1, CHLORIDE ION, SULFATE ION, ... 著者 Xu, Y.C, Li, M.J, Greenblatt, H, Chen, T.T, Silman, I, Sussman, J.L. 登録日 2011-09-08 公開日 2011-11-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Flexibility of the flap in the active site of BACE1 as revealed by crystal structures and molecular dynamics simulations Acta Crystallogr.,Sect.D, 68, 2012
3TPR	Crystal structure of BACE1 complexed with an inhibitor 分子名称: Beta-secretase 1, CHLORIDE ION, N-[(1S,2R)-1-BENZYL-3-(CYCLOPROPYLAMINO)-2-HYDROXYPROPYL]-5-[METHYL(METHYLSULFONYL)AMINO]-N'-[(1R)-1-PHENYLETHYL]ISOPHTHALAMIDE 著者 Xu, Y.C, Li, M.J, Greenblatt, H, Chen, T.T, Silman, I, Sussman, J.L. 登録日 2011-09-08 公開日 2011-11-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Flexibility of the flap in the active site of BACE1 as revealed by crystal structures and molecular dynamics simulations Acta Crystallogr.,Sect.D, 68, 2012
3TPL	APO Structure of BACE1 分子名称: Beta-secretase 1, CHLORIDE ION, SULFATE ION 著者 Xu, Y.C, Li, M.J, Greenblatt, H, Chen, T.T, Silman, I, Sussman, J.L. 登録日 2011-09-08 公開日 2011-11-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Flexibility of the flap in the active site of BACE1 as revealed by crystal structures and molecular dynamics simulations Acta Crystallogr.,Sect.D, 68, 2012
8SXS	Crystal structure of a Nudix hydrolase effector from Magnaporthe oryzae 分子名称: Nudix hydrolase domain-containing protein 著者 McCombe, C.L, Ericsson, D.J, Williams, S.J. 登録日 2023-05-23 公開日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Plant pathogenic fungi hijack phosphate starvation signaling with conserved enzymatic effectors Biorxiv, 2023
4ZQS	New compact conformation of linear Ub2 structure 分子名称: ubiquitin 著者 Thach, T.T, Shin, D, Han, S, Lee, S. 登録日 2015-05-11 公開日 2016-04-20 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.804 Å) 主引用文献 New conformations of linear polyubiquitin chains from crystallographic and solution-scattering studies expand the conformational space of polyubiquitin. Acta Crystallogr D Struct Biol, 72, 2016
6IEV	Crystal structure of a designed protein 分子名称: Designed protein 著者 Han, M, Liao, S, Chen, Q, Liu, H. 登録日 2018-09-17 公開日 2019-09-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Selection and analyses of variants of a designed protein suggest importance of hydrophobicity of partially buried sidechains for protein stability at high temperatures. Protein Sci., 28, 2019
8TJG	Structure of Nei2 from Mycobacterium smegmatis in complex with Zn2+ 分子名称: DNA-(apurinic or apyrimidinic site) lyase, ZINC ION 著者 Warren, G, Shuman, S. 登録日 2023-07-21 公開日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structure of Nei2 from Mycobacterium smegmatis in complex with Zn2+ To Be Published
3IH2	TM1030 crystallized at 323K 分子名称: Transcriptional regulator, TetR family 著者 Koclega, K.D, Chruszcz, M, Bujacz, G, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG) 登録日 2009-07-29 公開日 2009-08-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 'Hot' macromolecular crystals. Cryst.Growth Des., 10, 2010
3IH4	TM1030 crystallized at 277K 分子名称: Transcriptional regulator, TetR family 著者 Koclega, K.D, Chruszcz, M, Bujacz, G, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG) 登録日 2009-07-29 公開日 2009-08-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 'Hot' macromolecular crystals. Cryst.Growth Des., 10, 2010
3IH3	TM1030 crystallized at 310K 分子名称: Transcriptional regulator, TetR family 著者 Koclega, K.D, Chruszcz, M, Bujacz, G, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG) 登録日 2009-07-29 公開日 2009-08-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 'Hot' macromolecular crystals. Cryst.Growth Des., 10, 2010
8A7N	Crystal Structure of human Brachyury G177D variant in complex with (S)-N-(3-aminopropyl)-3-((1-(2-fluorophenyl)-2-oxopyrrolidin-3-yl)amino)-N-methylbenzamide (CF-2-125) 分子名称: N-(3-azanylpropyl)-3-[[(3S)-1-(2-fluorophenyl)-2-oxidanylidene-pyrrolidin-3-yl]amino]-N-methyl-benzamide, PHOSPHATE ION, T-box transcription factor T 著者 Newman, J.A, Gavard, A, Aitkenhead, H, Imprachim, N, Sherestha, L, Burgess-Brown, N.A, von Delft, F, Bountra, C, Gileadi, O. 登録日 2022-06-21 公開日 2022-10-05 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of human Brachyury G177D variant in complex with (S)-N-(3-aminopropyl)-3-((1-(2-fluorophenyl)-2-oxopyrrolidin-3-yl)amino)-N-methylbenzamide (CF-2-125) To Be Published
6GWV	Molybdenum storage protein without polymolybdate clusters and ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, Molybdenum storage protein subunit alpha, ... 著者 Ermler, U, Poppe, J, Bruenle, S. 登録日 2018-06-26 公開日 2018-11-07 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The Molybdenum Storage Protein: A soluble ATP hydrolysis-dependent molybdate pump. FEBS J., 285, 2018
8A8L	Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme-coordinated fragment 分子名称: 6-methoxy-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole, Cytochrome P450 protein, GLYCEROL, ... 著者 Snee, M, Katariya, M, Levy, C. 登録日 2022-06-23 公開日 2023-07-05 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme-coordinated fragment To Be Published
7WNV	Crystal structure of mutant estrogen receptor alpha Y537S in complex with CO9 分子名称: (~{Z})-4-[2-[4-[[2-(4-hydroxyphenyl)-6-oxidanyl-1-benzothiophen-3-yl]oxy]phenoxy]ethylamino]-~{N},~{N}-dimethyl-but-2-enamide, Estrogen receptor 著者 Xiao, Y, Lv, Y. 登録日 2022-01-19 公開日 2023-01-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 X-ray crystallography study and optimization of novel benzothiophene analogs as potent selective estrogen receptor covalent antagonists (SERCAs) with improved potency and safety profiles. Bioorg.Chem., 141, 2023
3T94	Crystal structure of 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP) II complexed with 5'-deoxy-5'-methylthioadenosine and sulfate 分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, 5'-methylthioadenosine phosphorylase (MtaP), SULFATE ION 著者 Zhang, Y, Ealick, S.E. 登録日 2011-08-02 公開日 2011-08-24 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.452 Å) 主引用文献 A corrected space group for Sulfolobus sulfataricus 5'-deoxy-5'-methylthioadenosine phosphorylase II. Acta Crystallogr.,Sect.D, 68, 2012
5AZE	Fab fragment of calcium-dependent antigen binding antibody, 6RL#9 分子名称: 6RL#9 FAB HEAVY CHAIN, 6RL#9 FAB LIGHT CHAIN, CALCIUM ION 著者 Kadono, S, Hironiwa, N, Ishii, S, Igawa, T, Hattori, K. 登録日 2015-10-02 公開日 2015-11-11 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Calcium-dependent antigen binding as a novel modality for antibody recycling by endosomal antigen dissociation Mabs, 8, 2016
6HQJ	apo-form of polyphenol oxidase from Solanum lycopersicum 分子名称: Polyphenol oxidase A, chloroplastic 著者 Kampatsikas, I, Bijelic, A, Rompel, A. 登録日 2018-09-25 公開日 2019-03-20 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.802 Å) 主引用文献 Biochemical and structural characterization of tomato polyphenol oxidases provide novel insights into their substrate specificity. Sci Rep, 9, 2019
6NOV	A Fab derived from ixekizumab 分子名称: DODECAETHYLENE GLYCOL, Fab Heavy Chain, Fab Light Chain 著者 Durbin, J.D, Clawson, D.K, Lu, F, Tian, Y, Lu, J, Schmitt, M, Atwell, S. 登録日 2019-01-16 公開日 2019-06-19 最終更新日 2019-08-14 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Development of tibulizumab, a tetravalent bispecific antibody targeting BAFF and IL-17A for the treatment of autoimmune disease. Mabs, 11, 2019
6HQI	holo-form of polyphenol oxidase from Solanum lycopersicum 分子名称: COPPER (II) ION, OXYGEN ATOM, Polyphenol oxidase A, ... 著者 Kampatsikas, I, Bijelic, A, Rompel, A. 登録日 2018-09-25 公開日 2019-03-20 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Biochemical and structural characterization of tomato polyphenol oxidases provide novel insights into their substrate specificity. Sci Rep, 9, 2019
6VIF	Human LRH-1 ligand-binding domain bound to agonist cpd 15 and fragment of coregulator TIF-2 分子名称: N-[(8beta,11alpha,12alpha)-8-{[methyl(phenyl)amino]methyl}-1,6:7,14-dicycloprosta-1(6),2,4,7(14)-tetraen-11-yl]sulfuric diamide, Nuclear receptor coactivator 2, Nuclear receptor subfamily 5 group A member 2 著者 Cato, M.L, Ortlund, E.A. 登録日 2020-01-13 公開日 2020-06-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Development of a new class of liver receptor homolog-1 (LRH-1) agonists by photoredox conjugate addition. Bioorg.Med.Chem.Lett., 30, 2020
5BKL	Crystallographic structure of the cubic crystal form of STMV (77.9 degree rotation) grown from NaCl 分子名称: CHLORIDE ION, Coat protein, MAGNESIUM ION, ... 著者 McPherson, A. 登録日 2021-03-20 公開日 2021-12-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.94 Å) 主引用文献 Structures of additional crystal forms of Satellite tobacco mosaic virus grown from a variety of salts. Acta Crystallogr.,Sect.F, 77, 2021
6JDG	Complexed crystal structure of PaSSB with ssDNA dT20 at 2.39 angstrom resolution 分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Single-stranded DNA-binding protein 著者 Huang, Y.H, Huang, C.Y. 登録日 2019-02-01 公開日 2019-12-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.388 Å) 主引用文献 Complexed crystal structure of SSB reveals a novel single-stranded DNA binding mode (SSB)3:1: Phe60 is not crucial for defining binding paths. Biochem.Biophys.Res.Commun., 520, 2019
3PXP	Crystal structure of a PAS and DNA binding domain containing protein (Caur_2278) from CHLOROFLEXUS AURANTIACUS J-10-FL at 2.30 A resolution 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Helix-turn-helix domain protein, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2010-12-10 公開日 2011-01-19 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of an MmyB-Like Regulator from C. aurantiacus, Member of a New Transcription Factor Family Linked to Antibiotic Metabolism in Actinomycetes. Plos One, 7, 2012
5WFN	Revised model of leiomodin 2-mediated actin regulation (alternate refinement of PDB 4RWT) 分子名称: Actin-5C, Leiomodin-2, MAGNESIUM ION, ... 著者 Yurtsever, Z, Eck, M.J, Dominguez, R. 登録日 2017-07-12 公開日 2017-08-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of leiomodin 2 in complex with actin: a structural and functional reexamination Biophys.J., 113, 2017

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