PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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3V6K	Replication of N2,3-Ethenoguanine by DNA Polymerases 分子名称: CALCIUM ION, DNA (5'-D(*TP*CP*AP*CP*(EFG)P*GP*AP*AP*TP*CP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*GP*AP*TP*TP*CP*(2DT))-3'), ... 著者 Zhao, L. 登録日 2011-12-20 公開日 2012-04-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Replication of n(2) ,3-ethenoguanine by DNA polymerases. Angew.Chem.Int.Ed.Engl., 51, 2012
3VA7	Crystal structure of the Kluyveromyces lactis Urea Carboxylase 分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, GLYCEROL, KLLA0E08119p, ... 著者 Fan, C, Xiang, S. 登録日 2011-12-29 公開日 2012-02-01 最終更新日 2013-07-17 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of urea carboxylase provides insights into the carboxyltransfer reaction J.Biol.Chem., 287, 2012
3VIO	Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product 分子名称: 3-{4-[2-(beta-D-glucopyranosyloxy)ethyl]piperazin-1-yl}propane-1-sulfonic acid, Beta-glucosidase, CHLORIDE ION, ... 著者 Jeng, W.Y, Liu, C.I, Wang, A.H.J. 登録日 2011-10-03 公開日 2012-07-04 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates Acta Crystallogr.,Sect.D, 68, 2012
3VII	Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Bis-Tris 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, GLYCEROL, ... 著者 Jeng, W.Y, Liu, C.I, Wang, A.H.J. 登録日 2011-10-03 公開日 2012-07-04 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (0.97 Å) 主引用文献 High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates Acta Crystallogr.,Sect.D, 68, 2012
1EMS	CRYSTAL STRUCTURE OF THE C. ELEGANS NITFHIT PROTEIN 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ETHYL MERCURY ION, NIT-FRAGILE HISTIDINE TRIAD FUSION PROTEIN, ... 著者 Pace, H.C, Hodawadekar, S.C, Draganescu, A, Huang, J, Bieganowski, P, Pekarsky, Y, Croce, C.M, Brenner, C. 登録日 2000-03-17 公開日 2000-07-20 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of the worm NitFhit Rosetta Stone protein reveals a Nit tetramer binding two Fhit dimers. Curr.Biol., 10, 2000
1EUU	SIALIDASE OR NEURAMINIDASE, LARGE 68KD FORM 分子名称: SIALIDASE, SODIUM ION, beta-D-galactopyranose 著者 Gaskell, A, Crennell, S.J, Taylor, G.L. 登録日 1996-06-21 公開日 1997-01-11 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The three domains of a bacterial sialidase: a beta-propeller, an immunoglobulin module and a galactose-binding jelly-roll. Structure, 3, 1995
3VIG	Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin 分子名称: 1-DEOXYNOJIRIMYCIN, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-glucosidase, ... 著者 Jeng, W.Y, Liu, C.I, Wang, A.H.J. 登録日 2011-10-03 公開日 2012-07-04 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (0.99 Å) 主引用文献 High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates Acta Crystallogr.,Sect.D, 68, 2012
2M0U	Complex structure of C-terminal CFTR peptide and extended PDZ1 domain from NHERF1 分子名称: C-terminal CFTR peptide, Na(+)/H(+) exchange regulatory cofactor NHE-RF1 著者 Bhattacharya, S, Ju, J.H, Cowburn, D, Bu, Z. 登録日 2012-11-06 公開日 2013-04-24 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Ligand-Induced Dynamic Changes in Extended PDZ Domains from NHERF1. J.Mol.Biol., 425, 2013
3VDG	Crystal structure of enolase MSMEG_6132 (TARGET EFI-502282) from Mycobacterium smegmatis str. MC2 155 complexed with formate and acetate 分子名称: ACETATE ION, CHLORIDE ION, FORMIC ACID, ... 著者 Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI) 登録日 2012-01-05 公開日 2012-01-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of enolase MSMEG_6132 FROM Mycobacterium smegmatis To be Published
3VER	Crystal structure of the O-carbamoyltransferase TobZ in complex with carbamoyl adenylate intermediate 分子名称: 5'-O-[(S)-(carbamoyloxy)(hydroxy)phosphoryl]adenosine, FE (II) ION, O-carbamoyltransferase TobZ, ... 著者 Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F. 登録日 2012-01-09 公開日 2012-01-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction. Angew.Chem.Int.Ed.Engl., 51, 2012
2Z1N	Crystal structure of APE0912 from Aeropyrum pernix K1 分子名称: SODIUM ION, dehydrogenase 著者 Ichimura, T, Yamamura, A, Mimoto, F, Ohtsuka, J, Miyazono, K, Okai, M, Kamo, M, Lee, W.-C, Nagata, K, Tanokura, M. 登録日 2007-05-10 公開日 2008-03-18 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A unique catalytic triad revealed by the crystal structure of APE0912, a short-chain dehydrogenase/reductase family protein from Aeropyrum pernix K1 Proteins, 70, 2008
3VIH	Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with glycerol 分子名称: Beta-glucosidase, CHLORIDE ION, GLYCEROL, ... 著者 Jeng, W.Y, Liu, C.I, Wang, A.H.J. 登録日 2011-10-03 公開日 2012-07-04 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.03 Å) 主引用文献 High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates Acta Crystallogr.,Sect.D, 68, 2012
2Z68	Crystal Structure Of An Artificial Metalloprotein: Cr[N-salicylidene-4-amino-3-hydroxyhydrocinnamic acid]/Wild Type Heme oxygenase 分子名称: Heme oxygenase, SODIUM ION, SULFATE ION, ... 著者 Yokoi, N, Unno, M, Ueno, T, Ikeda-Saito, M, Watanabe, Y. 登録日 2007-07-24 公開日 2007-08-28 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Ligand design for improvement of thermal stabilityof metal complex/protein hybrids To be Published
2MAT	E.COLI METHIONINE AMINOPEPTIDASE AT 1.9 ANGSTROM RESOLUTION 分子名称: COBALT (II) ION, PROTEIN (METHIONINE AMINOPEPTIDASE), SODIUM ION 著者 Lowther, W.T, Orville, A.M, Madden, D.T, Lim, S, Rich, D.H, Matthews, B.W. 登録日 1999-03-29 公開日 1999-06-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Escherichia coli methionine aminopeptidase: implications of crystallographic analyses of the native, mutant, and inhibited enzymes for the mechanism of catalysis. Biochemistry, 38, 1999
2ZDV	Exploring Thrombin S1 pocket 分子名称: D-phenylalanyl-N-(3-fluorobenzyl)-L-prolinamide, Hirudin variant-1, PHOSPHATE ION, ... 著者 Baum, B, Heine, A, Klebe, G. 登録日 2007-11-29 公開日 2008-10-28 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Exploring Thrombin S1 pocket To be Published
2ZHE	Exploring thrombin S3 pocket 分子名称: Hirudin variant-2, N-cyclooctylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide, SODIUM ION, ... 著者 Brandt, T, Baum, B, Heine, A, Klebe, G. 登録日 2008-02-04 公開日 2009-02-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Exploring thrombin S3 pocket To be Published
3VQJ	Crystal Structutre of Thiobacillus thioparus THI115 Carbonyl Sulfide Hydrolase 分子名称: Carbonyl sulfide hydrolase, SODIUM ION, ZINC ION 著者 Katayama, Y, Noguchi, K, Ogawa, T, Ohtaki, A, Odaka, M, Yohda, M. 登録日 2012-03-24 公開日 2013-02-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Carbonyl Sulfide Hydrolase from Thiobacillus thioparus Strain THI115 Is One of the beta-Carbonic Anhydrase Family Enzymes J.Am.Chem.Soc., 135, 2013
3VFA	Crystal Structure of HIV-1 Protease Mutant V82A with novel P1'-Ligands GRL-02031 分子名称: (3aS,5R,6aR)-hexahydro-2H-cyclopenta[b]furan-5-yl [(1S,2R)-1-benzyl-2-hydroxy-3-([(4-methoxyphenyl)sulfonyl]{[(2R)-5-oxopyrrolidin-2-yl]methyl}amino)propyl]carbamate, CHLORIDE ION, SODIUM ION, ... 著者 Yu, X.X, Wang, Y.F, Chang, Y.C.E, Weber, I.T. 登録日 2012-01-09 公開日 2012-11-21 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 Potent antiviral HIV-1 protease inhibitor GRL-02031 adapts to the structures of drug resistant mutants with its P1'-pyrrolidinone ring. J.Med.Chem., 55, 2012
2ZGX	Thrombin Inhibition 分子名称: 1-[(2R)-2-aminobutanoyl]-N-(4-carbamimidoylbenzyl)-L-prolinamide, Hirudin variant-1, SODIUM ION, ... 著者 Baum, B, Heine, A, Klebe, G. 登録日 2008-01-28 公開日 2008-12-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Think twice: understanding the high potency of bis(phenyl)methane inhibitors of thrombin J.Mol.Biol., 391, 2009
3VI2	Crystal Structure Analysis of Plasmodium falciparum OMP Decarboxylase in complex with inhibitor HMOA 分子名称: 4-(2-hydroxy-4-methoxyphenyl)-4-oxobutanoic acid, Orotidine 5'-phosphate decarboxylase, SODIUM ION 著者 Takashima, Y, Mizohata, E, Krungkrai, S.R, Matsumura, H, Krungkrai, J, Horii, T, Inoue, T. 登録日 2011-09-16 公開日 2012-08-01 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The in silico screening and X-ray structure analysis of the inhibitor complex of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase J.Biochem., 152, 2012
3V7Z	Carboxypeptidase T with GEMSA 分子名称: (2-GUANIDINOETHYLMERCAPTO)SUCCINIC ACID, CALCIUM ION, Carboxypeptidase T, ... 著者 Kuznetsov, S.A, Timofeev, V.I, Akparov, V.K, Kuranova, I.P. 登録日 2011-12-22 公開日 2012-12-26 最終更新日 2015-09-30 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Structural insights into the broad substrate specificity of carboxypeptidase T from Thermoactinomyces vulgaris. Febs J., 282, 2015
3VRK	Crystal Structutre of Thiobacillus thioparus THI115 Carbonyl Sulfide Hydrolase / Thiocyanate complex 分子名称: Carbonyl sulfide hydrolase, SODIUM ION, THIOCYANATE ION, ... 著者 Katayama, Y, Noguchi, K, Ogawa, T, Ohtaki, A, Odaka, M, Yohda, M. 登録日 2012-04-11 公開日 2013-02-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.33 Å) 主引用文献 Carbonyl Sulfide Hydrolase from Thiobacillus thioparus Strain THI115 Is One of the beta-Carbonic Anhydrase Family Enzymes J.Am.Chem.Soc., 135, 2013
2M0V	Complex structure of C-terminal CFTR peptide and extended PDZ2 domain from NHERF1 分子名称: C-terminal CFTR peptide, Na(+)/H(+) exchange regulatory cofactor NHE-RF1 著者 Bhattacharya, S, Ju, J.H, Cowburn, D, Bu, Z. 登録日 2012-11-06 公開日 2013-04-24 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Ligand-Induced Dynamic Changes in Extended PDZ Domains from NHERF1. J.Mol.Biol., 425, 2013
3VE2	The 2.1 angstrom crystal structure of Transferrin binding protein B (TbpB) from serogroup B M982 Neisseria meningitidis 分子名称: ACETATE ION, GLYCEROL, SODIUM ION, ... 著者 Calmettes, C, Moraes, T.F. 登録日 2012-01-06 公開日 2012-02-22 最終更新日 2012-09-05 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 The structural basis of transferrin sequestration by transferrin-binding protein B. Nat.Struct.Mol.Biol., 19, 2012
3VFB	Crystal Structure of HIV-1 Protease Mutant N88D with novel P1'-Ligands GRL-02031 分子名称: (3aS,5R,6aR)-hexahydro-2H-cyclopenta[b]furan-5-yl [(1S,2R)-1-benzyl-2-hydroxy-3-([(4-methoxyphenyl)sulfonyl]{[(2R)-5-oxopyrrolidin-2-yl]methyl}amino)propyl]carbamate, CHLORIDE ION, GLYCEROL, ... 著者 Yu, X.X, Wang, Y.F, Chang, Y.C.E, Weber, I.T. 登録日 2012-01-09 公開日 2012-11-21 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Potent antiviral HIV-1 protease inhibitor GRL-02031 adapts to the structures of drug resistant mutants with its P1'-pyrrolidinone ring. J.Med.Chem., 55, 2012

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