PDB: 160289 件ウェブページステータス検索Chemie searchBIRD

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8P0K	Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex, module 2 of capping enzyme mobile 分子名称: DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ... 著者 Grimm, C, Jungwirth, S, Fischer, U. 登録日 2023-05-10 公開日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.64 Å) 主引用文献 Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target) To Be Published
8P0N	Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex shallow conformation 分子名称: DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ... 著者 Grimm, C, Jungwirth, S, Fischer, U. 登録日 2023-05-10 公開日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.58 Å) 主引用文献 Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target) To Be Published
8P0J	Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex 分子名称: DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ... 著者 Grimm, C, Jungwirth, S, Fischer, U. 登録日 2023-05-10 公開日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.39 Å) 主引用文献 Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target) To Be Published
2E2E	TPR domain of NrfG mediates the complex formation between heme lyase and formate-dependent nitrite reductase in Escherichia Coli O157:H7 分子名称: BETA-MERCAPTOETHANOL, Formate-dependent nitrite reductase complex nrfG subunit, IMIDAZOLE 著者 Han, D, Kim, K, Oh, J, Park, J, Kim, Y. 登録日 2006-11-11 公開日 2007-10-23 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 TPR domain of NrfG mediates complex formation between heme lyase and formate-dependent nitrite reductase in Escherichia coli O157:H7. Proteins, 70, 2008
3B5J	Crystal Structures of the S504A Mutant of an Isolated ABC-ATPase in Complex with TNP-ADP 分子名称: 2',3'-O-[(1R,6R)-2,4,6-trinitrocyclohexa-2,4-diene-1,1-diyl]adenosine 5'-(trihydrogen diphosphate), Alpha-hemolysin translocation ATP-binding protein hlyB 著者 Oswald, C, Jenewein, S, Smits, S.H.J, Holland, I.B, Schmitt, L. 登録日 2007-10-26 公開日 2008-01-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Water-mediated protein-fluorophore interactions modulate the affinity of an ABC-ATPase/TNP-ADP complex J.Struct.Biol., 162, 2008
2O4H	Human brain aspartoacylase complex with intermediate analog (N-phosphonomethyl-L-aspartate) 分子名称: Aspartoacylase, N-[HYDROXY(METHYL)PHOSPHORYL]-L-ASPARTIC ACID, ZINC ION 著者 Le Coq, J, Pavlovsky, A, Sanishvili, R, Viola, R.E. 登録日 2006-12-04 公開日 2007-11-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Examination of the Mechanism of Human Brain Aspartoacylase through the Binding of an Intermediate Analogue. Biochemistry, 47, 2008
3M3L	PEPA bound to the ligand binding domain of GluA2 (flop form) 分子名称: 2-[2,6-difluoro-4-({2-[(phenylsulfonyl)amino]ethyl}sulfanyl)phenoxy]acetamide, GLUTAMIC ACID, Glutamate receptor 2, ... 著者 Ptak, C.P, Ahmed, A.H, Oswald, R.E. 登録日 2010-03-09 公開日 2010-03-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Molecular mechanism of flop selectivity and subsite recognition for an AMPA receptor allosteric modulator: structures of GluA2 and GluA3 in complexes with PEPA. Biochemistry, 49, 2010
3AKA	Structural basis for prokaryotic calcium-mediated regulation by a Streptomyces coelicolor calcium-binding protein 分子名称: CALCIUM ION, Putative calcium binding protein 著者 Zhao, X, Pang, H, Wang, S, Zhou, W, Yang, K, Bartlam, M. 登録日 2010-07-09 公開日 2011-01-26 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for prokaryotic calciummediated regulation by a Streptomyces coelicolor calcium binding protein Protein Cell, 1, 2010
1SS9	Crystal Structural Analysis of Active Site Mutant Q189E of LgtC 分子名称: MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE, alpha-1,4-galactosyl transferase 著者 Lairson, L.L, Chiu, C.P, Ly, H.D, He, S, Wakarchuk, W.W, Strynadka, N.C, Withers, S.G. 登録日 2004-03-23 公開日 2004-09-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Intermediate trapping on a mutant retaining alpha-galactosyltransferase identifies an unexpected aspartate residue. J.Biol.Chem., 279, 2004
4JEB	Crystal structure of an engineered RIDC1 tetramer with four interfacial disulfide bonds and four three-coordinate Zn(II) sites 分子名称: PROTOPORPHYRIN IX CONTAINING FE, ZINC ION, soluble cytochrome b562 著者 Tezcan, F.A, Medina-Morales, A.M, Perez, A, Brodin, J.D. 登録日 2013-02-26 公開日 2013-08-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 In Vitro and Cellular Self-Assembly of a Zn-Binding Protein Cryptand via Templated Disulfide Bonds. J.Am.Chem.Soc., 135, 2013
1JEP	Chalcone Isomerase Complexed with 4'-hydroxyflavanone 分子名称: 2-(4-HYDROXY-PHENYL)-CHROMAN-4-ONE, CHALCONE--FLAVONONE ISOMERASE 1, SULFATE ION 著者 Jez, J.M, Noel, J.P. 登録日 2001-06-18 公開日 2001-12-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Reaction mechanism of chalcone isomerase. pH dependence, diffusion control, and product binding differences. J.Biol.Chem., 277, 2002
5T1L	Cetuximab Fab in complex with CQA(Ph)2DLSTRRLKC peptide 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CETUXIMAB FAB HEAVY CHAIN, CETUXIMAB FAB LIGHT CHAIN, ... 著者 Bzymek, K.P, Williams, J.C. 登録日 2016-08-19 公開日 2016-10-26 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes. Acta Crystallogr F Struct Biol Commun, 72, 2016
4JEA	Crystal structure of an engineered Zn-RIDC1 construct with four interfacial disulfide bonds 分子名称: PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ZINC ION, ... 著者 Tezcan, F.A, Medina-Morales, A.M, Perez, A, Brodin, J.D. 登録日 2013-02-26 公開日 2013-08-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 In Vitro and Cellular Self-Assembly of a Zn-Binding Protein Cryptand via Templated Disulfide Bonds. J.Am.Chem.Soc., 135, 2013
1MAZ	X-RAY STRUCTURE OF BCL-XL, AN INHIBITOR OF PROGRAMMED CELL DEATH 分子名称: Bcl-2-like protein 1 著者 Muchmore, S.W, Sattler, M, Liang, H, Meadows, R.P, Harlan, J.E, Yoon, H.S, Nettesheim, D, Chang, B.S, Thompson, C.B, Wong, S.L, Ng, S.C, Fesik, S.W. 登録日 1996-04-09 公開日 1997-04-21 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 X-ray and NMR structure of human Bcl-xL, an inhibitor of programmed cell death. Nature, 381, 1996
1ORP	Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Adenine Complex 分子名称: 5'-D(*AP*AP*GP*AP*CP*AP*TP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*T)-3', Endonuclease III, ... 著者 Fromme, J.C, Verdine, G.L. 登録日 2003-03-14 公開日 2003-07-15 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a Trapped Endonuclease III-DNA Covalent Intermediate Embo J., 22, 2003
1ORN	Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Guanine Complex 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*AP*GP*AP*CP*GP*TP*GP*GP*AP*C)-3', 5'-D(*T*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*T)-3', ... 著者 Fromme, J.C, Verdine, G.L. 登録日 2003-03-14 公開日 2003-07-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of a Trapped Endonuclease III-DNA Covalent Intermediate Embo J., 22, 2003
2L9M	Structure of cIAP1 CARD 分子名称: Baculoviral IAP repeat-containing protein 2 著者 Day, C.L, Rautureau, G.J.P, Hinds, M.G. 登録日 2011-02-21 公開日 2011-08-17 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 CARD-mediated autoinhibition of cIAP1's E3 ligase activity suppresses cell proliferation and migration. Mol.Cell, 42, 2011
2RPI	The NMR structure of the submillisecond folding intermediate of the Thermus thermophilus ribonuclease H 分子名称: Ribonuclease H 著者 Zhou, Z, Feng, H, Bai, Y. 登録日 2008-05-16 公開日 2009-03-31 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 The high-resolution NMR structure of the early folding intermediate of the Thermus thermophilus ribonuclease H J.Mol.Biol., 384, 2008
4EMA	Human peroxisome proliferator-activated receptor gamma in complex with rosiglitazone 分子名称: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL), Peroxisome proliferator-activated receptor gamma 著者 Liberato, M.V, Nascimento, A.S, Polikarpov, I. 登録日 2012-04-11 公開日 2013-03-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.545 Å) 主引用文献 Medium chain fatty acids are selective peroxisome proliferator activated receptor (PPAR) Gamma activators and pan-PPAR partial agonists Plos One, 7, 2012
3J3P	Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 135S Poliovirus and C3-Fab Complex 分子名称: C3 antibody, heavy chain, light chain, ... 著者 Lin, J, Cheng, N, Hogle, J.M, Steven, A.C, Belnap, D.M. 登録日 2013-04-10 公開日 2013-07-03 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (9.1 Å) 主引用文献 Conformational shift of a major poliovirus antigen confirmed by immuno-cryogenic electron microscopy. J.Immunol., 191, 2013
1TYJ	Crystal Structure Analysis of type II Cohesin A11 from Bacteroides cellulosolvens 分子名称: 1,2-ETHANEDIOL, METHANOL, cellulosomal scaffoldin 著者 Noach, I, Frolow, F, Jakoby, H, Rosenheck, S, Shimon, L.J.W, Lamed, R, Bayer, E.A. 登録日 2004-07-08 公開日 2005-04-26 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of a type-II cohesin module from the Bacteroides cellulosolvens cellulosome reveals novel and distinctive secondary structural elements J.Mol.Biol., 348, 2005
4EM9	Human PPAR gamma in complex with nonanoic acids 分子名称: 3,3',3''-phosphanetriyltripropanoic acid, GLYCEROL, Peroxisome proliferator-activated receptor gamma, ... 著者 Liberato, M.V, Nascimento, A.S, Polikarpov, I. 登録日 2012-04-11 公開日 2013-03-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Medium chain fatty acids are selective peroxisome proliferator activated receptor (PPAR) Gamma activators and pan-PPAR partial agonists Plos One, 7, 2012
1LXL	NMR STRUCTURE OF BCL-XL, AN INHIBITOR OF PROGRAMMED CELL DEATH, MINIMIZED AVERAGE STRUCTURE 分子名称: BCL-XL 著者 Muchmore, S.W, Sattler, M, Liang, H, Meadows, R.P, Harlan, J.E, Yoon, H.S, Nettesheim, D, Chang, B.S, Thompson, C.B, Wong, S.L, Ng, S.C, Fesik, S.W. 登録日 1996-04-04 公開日 1997-04-21 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 X-ray and NMR structure of human Bcl-xL, an inhibitor of programmed cell death. Nature, 381, 1996
7Y4N	Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos 分子名称: Growth factor receptor-bound protein 2 著者 Pooppadi, M.S, Ikeya, T, Sugasawa, H, Watanabe, R, Mishima, M, Inomata, K, Ito, Y. 登録日 2022-06-15 公開日 2022-08-31 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos. Biochem.Biophys.Res.Commun., 625, 2022
2KZG	A Transient and Low Populated Protein Folding Intermediate at Atomic Resolution 分子名称: Pre-mRNA-processing factor 40 homolog A 著者 Korzhnev, D.M, Religa, T.L, Banachewicz, W, Fersht, A.R, Kay, L.E. 登録日 2010-06-17 公開日 2010-09-29 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 A transient and low-populated protein-folding intermediate at atomic resolution. Science, 329, 2010

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