PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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2AJE	Solution structure of the Arabidopsis thaliana telomeric repeat-binding protein DNA binding domain 分子名称: telomere repeat-binding protein 著者 Hsiao, H.H, Sue, S.C, Chung, B.C, Cheng, Y.H, Huang, T.H. 登録日 2005-08-01 公開日 2006-07-04 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the Arabidopsis thaliana telomeric repeat-binding protein DNA binding domain: a new fold with an additional C-terminal helix J.Mol.Biol., 356, 2006
2L89	Solution structure of Pdp1 PWWP domain reveals its unique binding sites for methylated H4K20 and DNA 分子名称: PWWP domain-containing protein 1 著者 Qiu, Y, Zhang, J, Zhang, W. 登録日 2011-01-07 公開日 2011-12-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structure of Pdp1 PWWP domain reveals its unique binding sites for methylated H4K20 and DNA Biochem.J., 2011
1D9Z	CRYSTAL STRUCTURE OF THE DNA REPAIR PROTEIN UVRB IN COMPLEX WITH ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, EXCINUCLEASE UVRABC COMPONENT UVRB, MAGNESIUM ION, ... 著者 Theis, K, Chen, P.J, Skorvaga, M, Van Houten, B, Kisker, C. 登録日 1999-10-30 公開日 2000-05-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Crystal structure of UvrB, a DNA helicase adapted for nucleotide excision repair. EMBO J., 18, 1999
3LLN	Comparison between the orthorhombic an tetragonal form of the heptamer sequence d(GCG(xT)GCG)/d(CGCACGC). 分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*CP*GP*CP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*(XTR)P*GP*CP*G)-3') 著者 Robeyns, K, Herdewijn, P, Van Meervelt, L. 登録日 2010-01-29 公開日 2010-08-18 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Comparison between the orthorhombic and tetragonal forms of the heptamer sequence d[GCG(xT)GCG]/d(CGCACGC) Acta Crystallogr.,Sect.F, 66, 2010
4Z1X	Crystal structure of LAGLIDADG homing endonuclease I-GzeII in complex with DNA target 分子名称: CALCIUM ION, DNA (27-MER), LAGLIDADG endonuclease 著者 Stoddard, B.L, Lambert, A.R, Kulshina, N. 登録日 2015-03-27 公開日 2015-04-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of LAGLIDADG homing endonuclease I-GzeII in complex with DNA target To Be Published
1SSV	Compensating bends in a 16 base-pair DNA oligomer containing a T3A3 segment 分子名称: 5'-D(*CP*GP*AP*GP*GP*TP*TP*TP*AP*AP*AP*CP*CP*TP*CP*G)-3' 著者 McAteer, K, Aceves-Gaona, A, Michalczyk, R, Buchko, G.W, Isern, N.G, Silks, L.A, Miller, J.H, Kennedy, M.A. 登録日 2004-03-24 公開日 2004-12-07 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Compensating bends in a 16-base-pair DNA oligomer containing a T(3)A(3) segment: A NMR study of global DNA curvature Biopolymers, 75, 2004
1T4I	Crystal Structure of a DNA Decamer Containing a Thymine-dimer 分子名称: 5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3', 5'-D(*GP*CP*TP*TP*AP*AP*TP*TP*CP*G)-3' 著者 Park, H, Zhang, K, Ren, Y, Nadji, S, Sinha, N, Taylor, J.S, Kang, C. 登録日 2004-04-29 公開日 2004-05-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of a DNA Decamer Containing a cis-syn Thymine-dimer Proc.Natl.Acad.Sci.USA, 99, 2002
5I4S	Non-natural DNA pair Z (6-amino-5-nitro-2[1H] pyridone heterocycle)-Guanosine 分子名称: CALCIUM ION, DNA (5'-D(P*GP*CP*GP*AP*AP*TP*TP*(D8Z)P*GP*CP*G)-3') 著者 Ahmad Sobri, A.F, Brady, R.L. 登録日 2016-02-12 公開日 2017-02-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 Non-natural DNA pair Z (6-amino-5-nitro-2[1H] pyridone heterocycle)-Guanosine To Be Published
1SSJ	A DNA DUPLEX CONTAINING A CHOLESTEROL ADDUCT (BETA-ANOMER) 分子名称: 5'-D(*CP*CP*AP*CP*(HOB)P*GP*GP*AP*AP*C)-3', 5'-D(GP*TP*TP*CP*CP*GP*GP*TP*GP*G)-3' 著者 Gomez-Pinto, I, Cubero, E, Kalko, S.G, Monaco, V, van der Marel, G, van Boom, J.H, Orozco, M, Gonzalez, C. 登録日 2004-03-24 公開日 2004-06-01 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Effect of bulky lesions on DNA: Solution structure of a DNA duplex containing a cholesterol adduct. J.Biol.Chem., 279, 2004
8JFR	N-terminal domain of AcrIIA15 in complex with palindromic DNA substrate 分子名称: AcrIIA15, DNA (5'-D(*AP*TP*TP*AP*TP*GP*AP*CP*AP*AP*AP*TP*GP*TP*CP*AP*TP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*AP*TP*GP*AP*CP*AP*TP*TP*TP*GP*TP*CP*AP*TP*AP*A)-3') 著者 Deng, X, Wang, Y. 登録日 2023-05-18 公開日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 N-terminal domain of AcrIIA15 in complex with palindromic DNA substrate To Be Published
8JG9	Cryo-EM structure of the SaCas9-sgRNA-AcrIIA15-promoter DNA dimer 分子名称: AcrIIA15, CRISPR-associated endonuclease Cas9, DNA (25-MER), ... 著者 Deng, X, Wang, Y. 登録日 2023-05-20 公開日 2024-02-28 実験手法 ELECTRON MICROSCOPY (3.82 Å) 主引用文献 Cryo-EM structure of the SaCas9-sgRNA-AcrIIA15-promoter DNA dimer To Be Published
1RMX	A SHORT LEXITROPSIN THAT RECOGNIZES THE DNA MINOR GROOVE AT 5'-ACTAGT-3': UNDERSTANDING THE ROLE OF ISOPROPYL-THIAZOLE 分子名称: 5'-D(*CP*GP*AP*CP*TP*AP*GP*TP*CP*G)-3', N-[3-(DIMETHYLAMINO)PROPYL]-2-({[4-({[4-(FORMYLAMINO)-1-METHYL-1H-PYRROL-2-YL]CARBONYL}AMINO)-1-METHYL-1H-PYRROL-2-YL]CARBONYL}AMINO)-5-ISOPROPYL-1,3-THIAZOLE-4-CARBOXAMIDE 著者 Anthony, N.G, Johnston, B.F, Khalaf, A.I, Mackay, S.P, Parkinson, J.A, Suckling, C.J, Waigh, R.D. 登録日 2003-11-28 公開日 2004-08-24 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Short Lexitropsin that Recognizes the DNA Minor Groove at 5'-ACTAGT-3': Understanding the Role of Isopropyl-thiazole. J.Am.Chem.Soc., 126, 2004
1P4Y	Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions 分子名称: 5'-D(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3', SODIUM ION 著者 Hays, F.A, Vargason, J.M, Ho, P.S. 登録日 2003-04-24 公開日 2003-09-02 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Effect of Sequence on the Conformation of DNA Holliday Junctions Biochemistry, 42, 2003
1NW6	Structure of the beta class N6-adenine DNA methyltransferase RsrI bound to sinefungin 分子名称: CHLORIDE ION, MODIFICATION METHYLASE RSRI, SINEFUNGIN 著者 Thomas, C.B, Scavetta, R.D, Gumport, R.I, Churchill, M.E.A. 登録日 2003-02-05 公開日 2003-07-29 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Structures of liganded and unliganded RsrI N6-adenine DNA methyltransferase: a distinct orientation for active cofactor binding J.Biol.Chem., 278, 2003
1NW8	Structure of L72P mutant beta class N6-adenine DNA methyltransferase RsrI 分子名称: CHLORIDE ION, MODIFICATION METHYLASE RSRI 著者 Thomas, C.B, Scavetta, R.D, Gumport, R.I, Churchill, M.E.A. 登録日 2003-02-05 公開日 2003-07-29 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structures of liganded and unliganded RsrI N6-adenine DNA methyltransferase: a distinct orientation for active cofactor binding J.Biol.Chem., 278, 2003
6CQ3	Crystal structure of DNA dodecamer D(CGCGAATTCGCG) 分子名称: COBALT (II) ION, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION 著者 Delgado, J.L, Vance, N.R, Kerns, R.J. 登録日 2018-03-14 公開日 2018-05-02 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal structure of DNA dodecamer D(CGCGAATTCGCG) To Be Published
1NW7	Structure of the beta class N6-adenine DNA methyltransferase RsrI bound to S-ADENOSYL-L-HOMOCYSTEINE 分子名称: CHLORIDE ION, MODIFICATION METHYLASE RSRI, S-ADENOSYL-L-HOMOCYSTEINE 著者 Thomas, C.B, Scavetta, R.D, Gumport, R.I, Churchill, M.E.A. 登録日 2003-02-05 公開日 2003-07-29 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structures of liganded and unliganded RsrI N6-adenine DNA methyltransferase: a distinct orientation for active cofactor binding J.Biol.Chem., 278, 2003
1NW5	Structure of the beta class N6-adenine DNA methyltransferase RsrI bound to S-ADENOSYLMETHIONINE 分子名称: CHLORIDE ION, MODIFICATION METHYLASE RSRI, S-ADENOSYLMETHIONINE 著者 Thomas, C.B, Scavetta, R.D, Gumport, R.I, Churchill, M.E.A. 登録日 2003-02-05 公開日 2003-07-29 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structures of liganded and unliganded RsrI N6-adenine DNA methyltransferase: a distinct orientation for active cofactor binding J.Biol.Chem., 278, 2003
6RSO	Structure of [Ru(phen)2(10-NO2-dppz)]2+ bound to the DNA sequence d(TCGGCGCCGA) 分子名称: BARIUM ION, DNA (5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3'), Ruthenium (bis-(phenanthroline)) (10-nitro-dipyridophenazine) 著者 McQuaid, K.T, Hall, J.P, Cardin, C.J. 登録日 2019-05-21 公開日 2020-07-08 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Structure of [Ru(phen)2(10-NO2-dppz)]2+ bound to the DNA sequence d(TCGGCGCCGA) To Be Published
4BLG	Crystal structure of MHV-68 Latency-associated nuclear antigen (LANA) C-terminal DNA binding domain 分子名称: LATENCY-ASSOCIATED NUCLEAR ANTIGEN, PHOSPHATE ION 著者 Correia, B, Cerqueira, S.A, Beauchemin, C, Pires De Miranda, M, Li, S, Ponnusamy, R, Rodrigues, L, Schneider, T.R, Carrondo, M.A, Kaye, K.M, Simas, J.P, McVey, C.E. 登録日 2013-05-02 公開日 2013-10-30 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structure of the Gamma-2 Herpesvirus Lana DNA Binding Domain Identifies Charged Surface Residues which Impact Viral Latency Plos Pathog., 9, 2013
2WPU	Chaperoned ruthenium metallodrugs that recognize telomeric DNA 分子名称: (3AS,4S,6AR)-4-(5-((3R,4R)-3,4-DIAMINOPYRROLIDIN-1-YL)-5-OXOPENTYL)TETRAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-2(3H)-ONE-P-CYMENE-CHLORO-RUTHENIUM(III), GLYCEROL, STREPTAVIDIN, ... 著者 Heinisch, T, Schirmer, T, Zimbron, J.M, Sardo, A, Wohlschlager, T, Gradinaru, J, Creus, M, Ward, T.R. 登録日 2009-08-10 公開日 2010-10-13 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Chemo-Genetic Optimization of DNA Recognition by Metallodrugs Using a Presenter-Protein Strategy. Chemistry, 16, 2010
4NCJ	Crystal Structure of Pyrococcus furiosis Rad50 R805E mutation with ADP Beryllium Flouride 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA double-strand break repair Rad50 ATPase, ... 著者 Classen, S, Williams, G.J, Arvai, A.S, Williams, R.S. 登録日 2013-10-24 公開日 2014-03-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 ATP-driven Rad50 conformations regulate DNA tethering, end resection, and ATM checkpoint signaling. Embo J., 33, 2014
1SS7	Compensating bends in a 16 base-pair DNA oligomer containing a T3A3 segment 分子名称: 5'-D(*CP*GP*AP*GP*GP*TP*TP*TP*AP*AP*AP*CP*CP*TP*CP*G)-3' 著者 McAteer, K, Aceves-Gaona, A, Michalczyk, R, Buchko, G.W, Isern, N.G, Silks, L.A, Miller, J.H, Kennedy, M.A. 登録日 2004-03-23 公開日 2004-12-07 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Compensating bends in a 16-base-pair DNA oligomer containing a T(3)A(3) segment: A NMR study of global DNA curvature Biopolymers, 75, 2004
1SP6	A DNA duplex containing a cholesterol adduct (alpha-anomer) 分子名称: 5'-D(*CP*CP*AP*CP*(HOL)P*GP*GP*AP*AP*C)-3', 5'-D(GP*TP*TP*CP*CP*GP*GP*TP*GP*G)-3' 著者 Gomez-Pinto, I, Cubero, E, Kalko, S.G, Monaco, V, van der Marel, G, van Boom, J.H, Orozco, M, Gonzalez, C. 登録日 2004-03-16 公開日 2004-06-01 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Effect of bulky lesions on DNA: Solution structure of a DNA duplex containing a cholesterol adduct. J.Biol.Chem., 279, 2004
1SM5	Crystal Structure of a DNA Decamer Containing a Thymine-dimer 分子名称: 5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3', 5'-D(*GP*CP*(BRU)P*TP*AP*AP*TP*(BRU)P*CP*G)-3' 著者 Park, H, Zhang, K, Ren, Y, Nadji, S, Sinha, N, Taylor, J.-S, Kang, C. 登録日 2004-03-08 公開日 2004-05-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of a DNA Decamer Containing a Thymine-dimer Proc.Natl.Acad.Sci.USA, 99, 2002

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