PDB: 160289 件ウェブページステータス検索Chemie searchBIRD

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7JRH	X-ray crystal structure of a cyclic peptide containing medin(19-25) and medin(31-37) 分子名称: CALCIUM ION, Cyclic peptide ASP-GLN-TRP-MLE-GLN-VAL-ASP-ORD-GLU-VAL-THR-GLY-ILE-ILE-THR-ORD 著者 Wierzbicki, M, Howitz, W.J, Nowick, J.S. 登録日 2020-08-12 公開日 2020-09-09 最終更新日 2020-09-30 実験手法 X-RAY DIFFRACTION (1.32 Å) 主引用文献 Interpenetrating Cubes in the X-ray Crystallographic Structure of a Peptide Derived from Medin 19-36 . J.Am.Chem.Soc., 142, 2020
6LKG	two-component system protein mediate signal transduction 分子名称: 6-O-phosphono-alpha-D-glucopyranose, ABC transporter, solute-binding protein, ... 著者 Wang, M, Tao, Y. 登録日 2019-12-19 公開日 2020-12-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.948 Å) 主引用文献 Interface switch mediates signal transmission in a two-component system. Proc.Natl.Acad.Sci.USA, 117, 2020
6LKJ	Two-component system protein mediate signal transduction 分子名称: 6-O-phosphono-beta-D-galactopyranose, ABC transporter, solute-binding protein 著者 Wang, M, Tao, Y. 登録日 2019-12-19 公開日 2020-12-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.004 Å) 主引用文献 Interface switch mediates signal transmission in a two-component system. Proc.Natl.Acad.Sci.USA, 117, 2020
5J89	Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor 分子名称: 1,2-ETHANEDIOL, N-{2-[({2-methoxy-6-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]pyridin-3-yl}methyl)amino]ethyl}acetamide, Programmed cell death 1 ligand 1 著者 Zak, K.M, Grudnik, P, Guzik, K, Zieba, B.J, Musielak, B, Doemling, P, Dubin, G, Holak, T.A. 登録日 2016-04-07 公開日 2016-04-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for small molecule targeting of the programmed death ligand 1 (PD-L1). Oncotarget, 7, 2016
1XO0	High resolution structure of the holliday junction intermediate in cre-loxp site-specific recombination 分子名称: Recombinase CRE, loxP 著者 Ghosh, K, Lau, C.K, Guo, F, Segall, A.M, Van Duyne, G.D. 登録日 2004-10-05 公開日 2004-12-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Peptide trapping of the Holliday junction intermediate in Cre-loxP site-specific recombination. J.Biol.Chem., 280, 2005
5J8O	Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor 分子名称: (2R)-1-({3-bromo-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)piperidine-2-carboxylic acid, Programmed cell death 1 ligand 1 著者 Zak, K.M, Grudnik, P, Guzik, K, Zieba, B.J, Musielak, B, Doemling, P, Dubin, G, Holak, T.A. 登録日 2016-04-08 公開日 2016-04-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for small molecule targeting of the programmed death ligand 1 (PD-L1). Oncotarget, 7, 2016
3P9Y	Crystal structure of the Drosophila melanogaster Ssu72-pCTD complex 分子名称: CG14216, IMIDAZOLE, TETRAETHYLENE GLYCOL, ... 著者 Werner-Allen, J.W, Zhou, P. 登録日 2010-10-18 公開日 2010-12-15 最終更新日 2016-08-17 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 cis-Proline-mediated Ser(P)5 Dephosphorylation by the RNA Polymerase II C-terminal Domain Phosphatase Ssu72. J.Biol.Chem., 286, 2011
6NIW	Crystal structure of P[6] rotavirus 分子名称: DI(HYDROXYETHYL)ETHER, Protease-sensitive outer capsid protein 著者 Xu, S, Liu, Y, Lakamp, L, Ahmed, L, Jiang, X, Kennedy, M.A. 登録日 2019-01-01 公開日 2020-01-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Molecular basis of P[II] major human rotavirus VP8* domain recognition of histo-blood group antigens. Plos Pathog., 16, 2020
6LKK	Two-component system protein mediate signal transduction 分子名称: 6-O-phosphono-alpha-D-glucopyranose, ABC transporter, solute-binding protein 著者 Wang, M, Tao, Y. 登録日 2019-12-19 公開日 2020-12-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.502 Å) 主引用文献 Interface switch mediates signal transmission in a two-component system. Proc.Natl.Acad.Sci.USA, 117, 2020
6LKL	Two-component system protein mediate signal transduction 分子名称: ABC transporter, solute-binding protein, MALONIC ACID 著者 Wang, M, Tao, Y. 登録日 2019-12-19 公開日 2020-12-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.213 Å) 主引用文献 Interface switch mediates signal transmission in a two-component system. Proc.Natl.Acad.Sci.USA, 117, 2020
1ZV5	Crystal structure of the variable domain of the camelid heavy-chain antibody D2-L29 in complex with hen egg white lysozyme 分子名称: Lysozyme C, PHOSPHATE ION, immunoglobulin heavy chain antibody variable domain 著者 De Genst, E, Silence, K, Decanniere, K, Conrath, K, Loris, R, Kinne, J, Muyldermans, S, Wyns, L. 登録日 2005-06-01 公開日 2006-04-04 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular basis for the preferential cleft recognition by dromedary heavy-chain antibodies. Proc.Natl.Acad.Sci.Usa, 103, 2006
6LKI	Two-component system protein mediate signal transduction 分子名称: ABC transporter, solute-binding protein, MALONIC ACID, ... 著者 Wang, M, Tao, Y. 登録日 2019-12-19 公開日 2020-12-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.781 Å) 主引用文献 Interface switch mediates signal transmission in a two-component system. Proc.Natl.Acad.Sci.USA, 117, 2020
1NVM	Crystal structure of a bifunctional aldolase-dehydrogenase : sequestering a reactive and volatile intermediate 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-hydroxy-2-oxovalerate aldolase, MANGANESE (II) ION, ... 著者 Manjasetty, A.B, Powlowski, J, Vrielink, A. 登録日 2003-02-04 公開日 2003-06-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of a bifunctional aldolase-dehydrogenase: Sequestering a reactive and volatile intermediate Proc.Natl.Acad.Sci.USA, 100, 2003
7MLX	SARS-CoV-2 programmed -1 frameshifting element three stem H-type pseudoknot 分子名称: BL3-6 Fab Heavy Chain, BL3-6 Fab Light Chain, RNA (65-MER) 著者 Roman, C, Lewicka, A. 登録日 2021-04-29 公開日 2021-08-11 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 The SARS-CoV-2 Programmed -1 Ribosomal Frameshifting Element Crystal Structure Solved to 2.09 angstrom Using Chaperone-Assisted RNA Crystallography. Acs Chem.Biol., 16, 2021
1P03	STRUCTURE ANALYSIS OF SPECIFICITY. ALPHA-LYTIC PROTEASE COMPLEXES WITH ANALOGUES OF REACTION INTERMEDIATES 分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-VALINE BORONIC ACID INHIBITOR, SULFATE ION 著者 Bone, R, Agard, D.A. 登録日 1989-04-24 公開日 1990-04-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural analysis of specificity: alpha-lytic protease complexes with analogues of reaction intermediates. Biochemistry, 28, 1989
3CRX	CRE RECOMBINASE/DNA COMPLEX INTERMEDIATE I 分子名称: CRE RECOMBINASE, DNA 35-MER 著者 Gopaul, D.N, Guo, F, Vanduyne, G.D. 登録日 1998-06-19 公開日 1999-12-14 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of the Holliday junction intermediate in Cre-loxP site-specific recombination. EMBO J., 17, 1998
4B3Z	Structure of the human collapsin response mediator protein-1, a lung cancer suppressor 分子名称: DIHYDROPYRIMIDINASE-RELATED PROTEIN 1 著者 Liu, S.H, Lin, Y.H, Huang, S.F, Niou, Y.K, Huang, L.L, Chen, Y.J. 登録日 2012-07-27 公開日 2013-08-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Structure of Human Collapsin Response Mediator Protein 1: A Possible Role of its C-Terminal Tail. Acta Crystallogr.,Sect.F, 71, 2015
2RDM	Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419 分子名称: GLYCEROL, Response regulator receiver protein 著者 Patskovsky, Y, Yan, Q, Zhan, C, Toro, R, Meyer, A.J, Gilmore, M, Hu, S, Groshong, C, Rodgers, L, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2007-09-24 公開日 2007-10-09 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419. To be Published
3VSJ	Crystal structure of 1,6-APD (2-ANIMOPHENOL-1,6-DIOXYGENASE) complexed with intermediate products 分子名称: (2Z,4Z)-2-imino-6-oxohex-4-enoic acid, (3E)-3-iminooxepin-2(3H)-one, 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit, ... 著者 Li, D.F, Hou, Y.J, Hu, Y, Wang, D.C, Liu, W. 登録日 2012-04-25 公開日 2013-01-16 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structures of aminophenol dioxygenase in complex with intermediate, product and inhibitor Acta Crystallogr.,Sect.D, 69, 2013
2DEU	Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the adenylated intermediate state 分子名称: ADENOSINE MONOPHOSPHATE, SULFATE ION, tRNA, ... 著者 Numata, T, Ikeuchi, Y, Fukai, S, Suzuki, T, Nureki, O. 登録日 2006-02-17 公開日 2006-08-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Snapshots of tRNA sulphuration via an adenylated intermediate Nature, 442, 2006
2RSU	Alternative structure of Ubiquitin 分子名称: Ubiquitin 著者 Kitazawa, S, Kameda, T, Yagi-Utsumi, M, Kato, K, Kitahara, R. 登録日 2012-06-15 公開日 2013-03-27 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin Biochemistry, 52, 2013
2MY3	Snu17p-Pml1p structure intermediate during RES complex assembly 分子名称: Pre-mRNA leakage protein 1, U2 snRNP component IST3 著者 Wysoczanski, P, Becker, S, Zweckstetter, M. 登録日 2015-01-19 公開日 2015-08-12 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structures of intermediates during RES complex assembly. Sci Rep, 5, 2015
5YRS	X-ray Snapshot of HIV-1 Protease in Action: Observation of Tetrahedral Intermediate and Its SIHB with Catalytic Aspartate 分子名称: PROTEASE, RT-RH oligopeprtide 著者 Das, A, Mahale, S, Prashar, V, Bihani, S, Ferrer, J.-L, Hosur, M.V. 登録日 2017-11-10 公開日 2018-03-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 X-ray snapshot of HIV-1 protease in action: observation of tetrahedral intermediate and short ionic hydrogen bond SIHB with catalytic aspartate. J. Am. Chem. Soc., 132, 2010
4WL9	Time Resolved Serial Femtosecond Crystallography Captures High Resolution Intermediates of PYP 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Tenboer, J, Schmidt, M. 登録日 2014-10-06 公開日 2014-12-17 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein. Science, 346, 2014
1Q36	EPSP synthase (Asp313Ala) liganded with tetrahedral reaction intermediate 分子名称: 3-phosphoshikimate 1-carboxyvinyltransferase, 5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-4-HYDROXY-3-PHOSPHONOOXY-CYCLOHEX-1-ENECARBOXYLIC ACID, FORMIC ACID 著者 Eschenburg, S, Kabsch, W, Healy, M.L, Schonbrunn, E. 登録日 2003-07-28 公開日 2003-12-16 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A New View of the Mechanisms of UDP-N-Acetylglucosamine Enolpyruvyl Transferase (MurA) and 5-Enolpyruvylshikimate-3-phosphate Synthase (AroA) Derived from X-ray Structures of Their Tetrahedral Reaction Intermediate States. J.Biol.Chem., 278, 2003

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