PDB: 14265 件ウェブページステータス検索Chemie searchBIRD

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7XT7	RNA polymerase II elongation complex transcribing a nucleosome (EC49B) 分子名称: Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, Paf1p, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-05-16 公開日 2022-10-12 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
7XN7	RNA polymerase II elongation complex containing Spt4/5, Elf1, Spt6, Spn1 and Paf1C 分子名称: Chromatin elongation factor SPT5, Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-04-28 公開日 2022-09-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
8IUE	RNA polymerase III pre-initiation complex melting complex 1 分子名称: DNA (74-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Hou, H, Jin, Q, Ren, Y, Wang, Q, Xu, Y. 登録日 2023-03-24 公開日 2023-05-24 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structure of the SNAPc-bound RNA polymerase III preinitiation complex. Cell Res., 33, 2023
8IUH	RNA polymerase III pre-initiation complex open complex 1 分子名称: DNA (81-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Hou, H, Jin, Q, Ren, Y, Wang, Q, Xu, Y. 登録日 2023-03-24 公開日 2023-05-24 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of the SNAPc-bound RNA polymerase III preinitiation complex. Cell Res., 33, 2023
8W8N	Thermus thermophilus initiation transcription complex in the pre-translocated state 分子名称: DNA (21-MER), DNA (27-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Li, L, Zhang, Y. 登録日 2023-09-04 公開日 2024-07-24 実験手法 X-RAY DIFFRACTION (2.693 Å) 主引用文献 Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase. Proc.Natl.Acad.Sci.USA, 121, 2024
8W8P	Thermus thermophilus initiation transcription complex containing CMPcPP in the post-translocated state 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (21-MER), DNA (27-MER), ... 著者 Li, L, Zhang, Y. 登録日 2023-09-04 公開日 2024-07-24 実験手法 X-RAY DIFFRACTION (3.165 Å) 主引用文献 Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase. Proc.Natl.Acad.Sci.USA, 121, 2024
8W8O	Thermus thermophilus initiation complex in the half-translocated state 分子名称: DNA (21-MER), DNA (27-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Li, L, Zhang, Y. 登録日 2023-09-04 公開日 2024-07-24 実験手法 X-RAY DIFFRACTION (2.512 Å) 主引用文献 Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase. Proc.Natl.Acad.Sci.USA, 121, 2024
1L9K	dengue methyltransferase 分子名称: RNA-DIRECTED RNA POLYMERASE, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION 著者 Egloff, M.P, Benarroch, D, Selisko, B, Romette, J.L, Canard, B. 登録日 2002-03-25 公開日 2003-03-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 An RNA cap (nucleoside-2'-O-) methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization Embo J., 21, 2002
6F5O	A mechanism for the activation of the influenza virus transcriptase 分子名称: 3' promoter vRNA, 5' promoter vRNA, Polymerase acidic protein, ... 著者 Serna Martin, I, Grimes, J.M. 登録日 2017-12-02 公開日 2018-06-27 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (9.8 Å) 主引用文献 A Mechanism for the Activation of the Influenza Virus Transcriptase. Mol. Cell, 70, 2018
6F5P	A mechanism for the activation of the influenza virus transcriptase 分子名称: ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, DNA-directed RNA polymerase subunit, MAGNESIUM ION, ... 著者 Serna Martin, I, Grimes, J.M. 登録日 2017-12-02 公開日 2018-09-19 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (4.14 Å) 主引用文献 A Mechanism for the Activation of the Influenza Virus Transcriptase. Mol. Cell, 70, 2018
6VSX	X-ray crystal structure of the C-terminal domain of Bacillus subtilis RNA polymerase binding helicase HelD 分子名称: DNA helicase, PHOSPHATE ION 著者 Murakami, K.S, Chon, U. 登録日 2020-02-12 公開日 2020-06-10 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase. Nat Commun, 11, 2020
2E9T	Foot-and-mouth disease virus RNA-polymerase RNA dependent in complex with a template-primer RNA and 5F-UTP 分子名称: 5'-R(*GP*GP*GP*CP*CP*CP*(5FU))-3', 5'-R(P*UP*AP*GP*GP*GP*CP*CP*C)-3', MAGNESIUM ION, ... 著者 Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N. 登録日 2007-01-26 公開日 2007-06-26 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Sequential structures provide insights into the fidelity of RNA replication Proc.Natl.Acad.Sci.Usa, 104, 2007
7ZWC	Structure of SNAPc:TBP-TFIIA-TFIIB sub-complex bound to U5 snRNA promoter 分子名称: Non-template strand, TATA-box-binding protein, Template strand, ... 著者 Rengachari, S, Schilbach, S, Kaliyappan, T, Gouge, J, Zumer, K, Schwarz, J, Urlaub, H, Dienemann, C, Vannini, A, Cramer, P. 登録日 2022-05-19 公開日 2022-11-30 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II. Nat.Struct.Mol.Biol., 29, 2022
7ZXE	Structure of SNAPc containing Pol II pre-initiation complex bound to U1 snRNA promoter (OC) 分子名称: Non-template strand, TATA-box-binding protein, Template strand, ... 著者 Rengachari, S, Schilbach, S, Kaliyappan, T, Gouge, J, Zumer, K, Schwarz, J, Urlaub, H, Dienemann, C, Vannini, A, Cramer, P. 登録日 2022-05-20 公開日 2022-11-30 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II. Nat.Struct.Mol.Biol., 29, 2022
7ML3	General transcription factor TFIIH (weak binding) 分子名称: BJ4_G0050160.mRNA.1.CDS.1, General transcription and DNA repair factor IIH, General transcription and DNA repair factor IIH helicase subunit XPB, ... 著者 Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K. 登録日 2021-04-27 公開日 2022-02-02 最終更新日 2022-02-16 実験手法 ELECTRON MICROSCOPY (7.6 Å) 主引用文献 Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
7W88	CryoEM structure of open form ZmRDR2 at 3.5 Angstroms resolution 分子名称: RNA-dependent RNA polymerase 著者 Du, X, Yang, Z, Du, J. 登録日 2021-12-07 公開日 2022-06-08 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production. Plant Cell, 34, 2022
7W84	CryoEM structure of apo form ZmRDR2 at 3.4 Angstroms resolution 分子名称: RNA-dependent RNA polymerase 著者 Du, X, Yang, Z, Du, J. 登録日 2021-12-07 公開日 2022-06-08 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production. Plant Cell, 34, 2022
7W82	Crystal structure of maize RDR2 分子名称: RNA-dependent RNA polymerase 著者 Du, X, Yang, Z, Du, J. 登録日 2021-12-07 公開日 2022-06-08 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structure of plant RNA-DEPENDENT RNA POLYMERASE 2, an enzyme involved in small interfering RNA production. Plant Cell, 34, 2022
8WU2	Crystal structure of RNA-dependent RNA polymerases from Jingmen tick virus 分子名称: RNA polymerase, SELENIUM ATOM 著者 Liu, Z, Han, P, Peng, Q, Qi, J. 登録日 2023-10-20 公開日 2024-02-07 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structures of RNA-dependent RNA polymerases from Jingmen tick virus and Alongshan virus HLIFE, 2, 2024
3CW4	Large c-terminal domain of influenza a virus RNA-dependent polymerase PB2 分子名称: Polymerase basic protein 2 著者 Kuzuhara, T, Kise, D, Yoshida, H, Horita, T, Murasaki, Y, Utsunomiya, H, Fujiki, H, Tsuge, H. 登録日 2008-04-21 公開日 2009-01-13 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural basis of the influenza A virus RNA polymerase PB2 RNA-binding domain containing the pathogenicity-determinant lysine 627 residue J.Biol.Chem., 284, 2009
4K4T	Poliovirus polymerase elongation complex (r4_form) 分子名称: GLYCEROL, RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3'), ... 著者 Gong, P, Peersen, O.B. 登録日 2013-04-12 公開日 2013-05-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One, 8, 2013
1F6Z	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE 分子名称: RNASE P RNA RIBOZYME, P4 DOMAIN MUTANT 著者 Schmitz, M, Tinoco Jr, I. 登録日 2000-06-24 公開日 2000-10-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F7F	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM OLIGORIBONUCLEOTIDE, NMR, ENSEMBLE OF 9 STRUCTURES 分子名称: RNASE P RNA RIBOZYME, P4 DOMAIN 著者 Schmitz, M, Tinoco Jr, I. 登録日 2000-06-27 公開日 2000-10-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
1F7G	SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE, ENSEMBLE OF 17 STRUCTURES 分子名称: RNASE P RNA RIBOZYME, P4 DOMAIN 著者 Schmitz, M, Tinoco Jr, I. 登録日 2000-06-27 公開日 2000-10-09 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA. RNA, 6, 2000
4K4S	Poliovirus polymerase elongation complex (r3_form) 分子名称: GLYCEROL, RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3'), ... 著者 Gong, P, Peersen, O.B. 登録日 2013-04-12 公開日 2013-05-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One, 8, 2013

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