PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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4JTK	Crystal structure of R117Q mutant of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis 分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, CHLORIDE ION, SODIUM ION 著者 Allison, T.M, Cochrane, F.C, Jameson, G.B, Parker, E.J. 登録日 2013-03-23 公開日 2013-06-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Examining the Role of Intersubunit Contacts in Catalysis by 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthase. Biochemistry, 52, 2013
4LDE	Structure of beta2 adrenoceptor bound to BI167107 and an engineered nanobody 分子名称: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, Camelid Antibody Fragment, ... 著者 Ring, A.M, Manglik, A, Kruse, A.C, Enos, M.D, Weis, W.I, Garcia, K.C, Kobilka, B.K. 登録日 2013-06-24 公開日 2013-09-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Adrenaline-activated structure of beta 2-adrenoceptor stabilized by an engineered nanobody. Nature, 502, 2013
1G5A	AMYLOSUCRASE FROM NEISSERIA POLYSACCHAREA 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMYLOSUCRASE, ... 著者 Skov, L.K, Mirza, O, Henriksen, A, De Montalk, G.P, Remaud-Simeon, M, Sarcabal, P, Willemot, R.-M, Monsan, P, Gajhede, M. 登録日 2000-10-31 公開日 2001-10-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Amylosucrase, A Glucan-synthesizing Enzyme from the alpha-Amylase Family J.Biol.Chem., 276, 2001
1ZF6	TGG DUPLEX A-DNA 分子名称: 5'-D(*CP*CP*CP*CP*AP*TP*GP*GP*GP*G)-3', CALCIUM ION, SODIUM ION 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-19 公開日 2005-05-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
4LDL	Structure of beta2 adrenoceptor bound to hydroxybenzylisoproterenol and an engineered nanobody 分子名称: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, 4-[(1R)-1-hydroxy-2-{[1-(4-hydroxyphenyl)-2-methylpropan-2-yl]amino}ethyl]benzene-1,2-diol, Camelid Antibody Fragment, ... 著者 Ring, A.M, Manglik, A, Kruse, A.C, Enos, M.D, Weis, W.I, Garcia, K.C, Kobilka, B.K. 登録日 2013-06-24 公開日 2013-09-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Adrenaline-activated structure of beta 2-adrenoceptor stabilized by an engineered nanobody. Nature, 502, 2013
4KZW	Structure of the carbohydrate-recognition domain of the C-type lectin mincle 分子名称: C-TYPE LECTIN MINCLE, CALCIUM ION, CITRATE ANION, ... 著者 Feinberg, H, Jegouzo, S.A.F, Rowntree, T.J.W, Guan, Y, Brash, M.A, Taylor, M.E, Weis, W.I, Drickamer, K. 登録日 2013-05-30 公開日 2013-08-28 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Mechanism for Recognition of an Unusual Mycobacterial Glycolipid by the Macrophage Receptor Mincle. J.Biol.Chem., 288, 2013
1T64	Crystal Structure of human HDAC8 complexed with Trichostatin A 分子名称: CALCIUM ION, Histone deacetylase 8, SODIUM ION, ... 著者 Somoza, J.R, Skene, R.J, Katz, B.A, Mol, C, Ho, J.D, Jennings, A.J, Luong, C, Arvai, A, Buggy, J.J, Chi, E, Tang, J, Sang, B.-C, Verner, E, Wynands, R, Leahy, E.M, Dougan, D.R, Snell, G, Navre, M, Knuth, M.W, Swanson, R.V, McRee, D.E, Tari, L.W. 登録日 2004-05-05 公開日 2004-07-27 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases Structure, 12, 2004
1KVU	UDP-GALACTOSE 4-EPIMERASE COMPLEXED WITH UDP-PHENOL 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Thoden, J.B, Gulick, A.M, Holden, H.M. 登録日 1997-03-07 公開日 1998-03-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Mechanistic roles of tyrosine 149 and serine 124 in UDP-galactose 4-epimerase from Escherichia coli. Biochemistry, 36, 1997
4L57	High resolutin structure of human cytosolic 5'(3')-deoxyribonucleotidase 分子名称: 5'(3')-deoxyribonucleotidase, cytosolic type, GLYCEROL, ... 著者 Pachl, P, Brynda, J, Rezacova, P. 登録日 2013-06-10 公開日 2014-02-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 Structures of human cytosolic and mitochondrial nucleotidases: implications for structure-based design of selective inhibitors. Acta Crystallogr. D Biol. Crystallogr., 70, 2014
4KBO	Crystal structure of the human Mortalin (GRP75) ATPase domain in the apo form 分子名称: SODIUM ION, Stress-70 protein, mitochondrial 著者 Amick, J, Page, R.C, Nix, J.C, Misra, S. 登録日 2013-04-23 公開日 2014-04-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of the nucleotide-binding domain of mortalin, the mitochondrial Hsp70 chaperone. Protein Sci., 23, 2014
1KJI	Crystal structure of glycinamide ribonucleotide transformylase in complex with Mg-AMPPCP 分子名称: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CHLORIDE ION, ... 著者 Thoden, J.B, Firestine, S.M, Benkovic, S.J, Holden, H.M. 登録日 2001-12-04 公開日 2002-06-28 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 PurT-encoded glycinamide ribonucleotide transformylase. Accommodation of adenosine nucleotide analogs within the active site. J.Biol.Chem., 277, 2002
1XP7	HIV-1 subtype F genomic RNA Dimerization Initiation Site 分子名称: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SODIUM ION, ... 著者 Ennifar, E, Dumas, P. 登録日 2004-10-08 公開日 2005-10-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies J.Mol.Biol., 356, 2006
4KMR	Structure of a putative transcriptional regulator of LacI family from Sanguibacter keddieii DSM 10542. 分子名称: MAGNESIUM ION, SODIUM ION, Transcriptional regulator, ... 著者 Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Endres, M, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG) 登録日 2013-05-08 公開日 2013-06-05 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structure of a putative transcriptional regulator of LacI family from Sanguibacter keddieii DSM 10542. To be Published
4KS2	Influenza Neuraminidase in complex with antiviral compound (3S,4R,5R)-4-(acetylamino)-3-carbamimidamido-5-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid 分子名称: (3S,4R,5R)-4-(acetylamino)-3-carbamimidamido-5-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, CALCIUM ION, Neuraminidase 著者 Kerry, P.S, Russell, R.J.M. 登録日 2013-05-17 公開日 2013-10-30 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.595 Å) 主引用文献 Structural basis for a class of nanomolar influenza A neuraminidase inhibitors. Sci Rep, 3, 2013
4N8Z	In situ lysozyme crystallized on a MiTeGen micromesh with benzamidine ligand 分子名称: BENZAMIDINE, CHLORIDE ION, Lysozyme C, ... 著者 Yin, X, Scalia, A, Leroy, L, Cuttitta, C.M, Polizzo, G.M, Ericson, D.L, Roessler, C.G, Campos, O, Agarwal, R, Allaire, M, Orville, A.M, Jackimowicz, R, Ma, M.Y, Sweet, R.M, Soares, A.S. 登録日 2013-10-18 公開日 2013-10-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Hitting the target: fragment screening with acoustic in situ co-crystallization of proteins plus fragment libraries on pin-mounted data-collection micromeshes. Acta Crystallogr.,Sect.D, 70, 2014
2EIN	Zinc ion binding structure of bovine heart cytochrome C oxidase in the fully oxidized state 分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ... 著者 Muramoto, K, Hirata, K, Shinzawa-Itoh, K, Yoko-o, S, Yamashita, E, Aoyama, H, Tsukihara, T, Yoshikawa, S. 登録日 2007-03-13 公開日 2007-05-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A histidine residue acting as a controlling site for dioxygen reduction and proton pumping by cytochrome c oxidase Proc.Natl.Acad.Sci.Usa, 104, 2007
1DPY	THREE-DIMENSIONAL STRUCTURE OF A NOVEL PHOSPHOLIPASE A2 FROM INDIAN COMMON KRAIT AT 2.45 A RESOLUTION 分子名称: PHOSPHOLIPASE A2, SODIUM ION 著者 Singh, G, Gourinath, S, Sharma, S, Paramasivam, M, Srinivasan, A, Singh, T.P. 登録日 1999-12-28 公開日 2000-06-28 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Sequence and crystal structure determination of a basic phospholipase A2 from common krait (Bungarus caeruleus) at 2.4 A resolution: identification and characterization of its pharmacological sites. J.Mol.Biol., 307, 2001
1ZDN	Ubiquitin-conjugating enzyme E2S 分子名称: SODIUM ION, Ubiquitin-conjugating enzyme E2S 著者 Walker, J.R, Avvakumov, G.V, Xue, S, Newman, E.M, Mackenzie, F, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC) 登録日 2005-04-14 公開日 2005-05-03 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen. Mol Cell Proteomics, 11, 2012
4N9R	X-ray structure of the complex between hen egg white lysozyme and pentacholrocarbonyliridate(III) (1 day) 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ... 著者 Petruk, A.A, Bikiel, D.E, Vergara, A, Merlino, A. 登録日 2013-10-21 公開日 2015-12-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Interaction between proteins and Ir based CO releasing molecules: mechanism of adduct formation and CO release. Inorg.Chem., 53, 2014
4MPA	Crystal structure of NHERF1-CXCR2 signaling complex in P21 space group 分子名称: ACETIC ACID, CHLORIDE ION, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, ... 著者 Jiang, Y, Lu, G, Wu, Y, Brunzelle, J, Sirinupong, N, Li, C, Yang, Z. 登録日 2013-09-12 公開日 2014-01-15 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.097 Å) 主引用文献 New Conformational State of NHERF1-CXCR2 Signaling Complex Captured by Crystal Lattice Trapping. Plos One, 8, 2013
4JZY	Crystal structures of Drosophila Cryptochrome 分子名称: AMMONIUM ION, Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Czarna, A, Wolf, E. 登録日 2013-04-03 公開日 2013-06-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Structures of Drosophila cryptochrome and mouse cryptochrome1 provide insight into circadian function. Cell(Cambridge,Mass.), 153, 2013
4K7Y	Oye1-w116t 分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, ... 著者 Sullivan, B, Pompeu, Y.A, Stewart, J.D. 登録日 2013-04-17 公開日 2013-10-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.199 Å) 主引用文献 X‑ray Crystallography Reveals How Subtle Changes Control the Orientation of Substrate Binding in an Alkene Reductase ACS CATALYSIS, 3, 2013
1RVG	crystal structure of class II fructose-bisphosphate aldolase from Thermus aquaticus in complex with Y 分子名称: COBALT (II) ION, SODIUM ION, SULFATE ION, ... 著者 Izard, T, Sygusch, J. 登録日 2003-12-13 公開日 2004-01-27 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Induced Fit Movements and Metal Cofactor Selectivity of Class II Aldolases: STRUCTURE OF THERMUS AQUATICUS FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE. J.Biol.Chem., 279, 2004
2B8H	A/NWS/whale/Maine/1/84 (H1N9) reassortant influenza virus neuraminidase 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ... 著者 Smith, B.J, Platis, D, Cox, M.M.J, Huyton, T, Joosten, R.P, McKimm-Breschkin, J.L, Zhang, J.-G, Luo, C.S, Lou, M.-Z, Garrett, T.P.J, Labrou, N.E. 登録日 2005-10-07 公開日 2006-09-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a calcium-deficient form of influenza virus neuraminidase: implications for substrate binding. Acta Crystallogr.,Sect.D, 62, 2006
4KRR	Crystal structure of Drosophila WntD N-terminal domain-linker (residues 31-240) 分子名称: GLYCEROL, SODIUM ION, Wnt inhibitor of Dorsal protein 著者 Chu, M.L.-H, Choi, H.-J, Ahn, V.E, Daniels, D.L, Nusse, R, Weis, W.I. 登録日 2013-05-16 公開日 2013-07-10 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.124 Å) 主引用文献 Structural Studies of Wnts and Identification of an LRP6 Binding Site. Structure, 21, 2013

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