Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2ORO
DownloadVisualize
BU of 2oro by Molmil
Murine inducible nitric oxide synthase oxygenase domain (delta 114) (r)-1-(2-imidazol-1-yl-6-methyl-pyrimidin-4-yl)-pyrrolidine-2-carboxylic acid (2-benzo[1,3]dioxol-5-yl-ethyl)-amide complex
分子名称: N-[2-(1,3-BENZODIOXOL-5-YL)ETHYL]-1-[2-(1H-IMIDAZOL-1-YL)-6-METHYLPYRIMIDIN-4-YL]-D-PROLINAMIDE, PROTOPORPHYRIN IX CONTAINING FE, SULFITE ION, ...
著者Adler, M, Whitlow, M.
登録日2007-02-04
公開日2007-04-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design, Synthesis, and Activity of 2-Imidazol-1-ylpyrimidine Derived Inducible Nitric Oxide Synthase Dimerization Inhibitors
J.Med.Chem., 50, 2007
9RCP
DownloadVisualize
BU of 9rcp by Molmil
1,2-propanediol dehydratase with 0.1 % 1,3-propanediol additive
分子名称: 1,2-ETHANEDIOL, Glycyl radical protein
著者Kalnins, G, Estere, M.
登録日2025-05-29
公開日2025-06-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献1,2-propanediol dehydratase with 0.1 % 1,3-propanediol additive
To Be Published
9RCO
DownloadVisualize
BU of 9rco by Molmil
1,2-propanediol dehydratase with 0.1 % glycerol additive
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Glycyl radical protein
著者Kalnins, G, Estere, M.
登録日2025-05-29
公開日2025-06-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献1,2-propanediol dehydratase with 0.1 % glycerol additive
To Be Published
9RCQ
DownloadVisualize
BU of 9rcq by Molmil
1,2-propanediol dehydratase with no ligand additives
分子名称: 1,2-ETHANEDIOL, Glycyl radical protein
著者Kalnins, G, Estere, M.
登録日2025-05-29
公開日2025-06-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献1,2-propanediol dehydratase with no ligand additives
To Be Published
4WRH
DownloadVisualize
BU of 4wrh by Molmil
AKR1C3 complexed with breakdown product of N-(tert-butyl)-2-(2-chloro-4-(((3-mercapto-5-methyl-4H-1,2,4-triazol-4-yl)amino)methyl)-6-methoxyphenoxy)acetamide
分子名称: 1,2-ETHANEDIOL, 2-[4-(aminomethyl)-2-chloro-6-methoxyphenoxy]-N-tert-butylacetamide, 5-methyl-4H-1,2,4-triazole-3-thiol, ...
著者Squire, C.J, Flanagan, J.U, Yosaatmadja, Y.
登録日2014-10-24
公開日2014-11-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Breakdown product of N-(tert-butyl)-2-(2-chloro-4-(((3-mercapto-5-methyl-4H-1,2,4-triazol-4-yl)amino)methyl)-6-methoxyphenoxy)acetamide trapped in active site of AKR1C3
To Be Published
4WZ5
DownloadVisualize
BU of 4wz5 by Molmil
Crystal structure of P. aeruginosa OXA10
分子名称: Beta-lactamase OXA-10, CARBON DIOXIDE, SULFATE ION, ...
著者Ferguson, A.D.
登録日2014-11-18
公開日2015-08-05
最終更新日2025-04-02
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献4,5-Disubstituted 6-Aryloxy-1,3-dihydrobenzo[c][1,2]oxaboroles Are Broad-Spectrum Serine beta-Lactamase Inhibitors.
Acs Infect Dis., 1, 2015
4WYY
DownloadVisualize
BU of 4wyy by Molmil
Crystal Structure of P. aeruginosa AmpC
分子名称: Beta-lactamase, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Ferguson, A.D.
登録日2014-11-18
公開日2015-08-05
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献4,5-Disubstituted 6-Aryloxy-1,3-dihydrobenzo[c][1,2]oxaboroles Are Broad-Spectrum Serine beta-Lactamase Inhibitors.
ACS Infect Dis, 1, 2015
6YTD
DownloadVisualize
BU of 6ytd by Molmil
CLK1 V324A mutant bound with benzothiazole Tg003 (Cpd 2)
分子名称: (1~{Z})-1-(3-ethyl-5-methoxy-1,3-benzothiazol-2-ylidene)propan-2-one, Dual specificity protein kinase CLK1
著者Schroeder, M, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-04-24
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DFG-1 Residue Controls Inhibitor Binding Mode and Affinity, Providing a Basis for Rational Design of Kinase Inhibitor Selectivity.
J.Med.Chem., 63, 2020
6YTE
DownloadVisualize
BU of 6yte by Molmil
CLK1 bound with benzothiazole Tg003 (Cpd 2)
分子名称: (1~{Z})-1-(3-ethyl-5-methoxy-1,3-benzothiazol-2-ylidene)propan-2-one, Dual specificity protein kinase CLK1
著者Schroeder, M, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-04-24
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DFG-1 Residue Controls Inhibitor Binding Mode and Affinity, Providing a Basis for Rational Design of Kinase Inhibitor Selectivity.
J.Med.Chem., 63, 2020
5EQV
DownloadVisualize
BU of 5eqv by Molmil
1.45 Angstrom Crystal Structure of Bifunctional 2',3'-cyclic Nucleotide 2'-phosphodiesterase/3'-Nucleotidase Periplasmic Precursor Protein from Yersinia pestis with Phosphate bound to the Active site
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-MALATE, FE (III) ION, ...
著者Minasov, G, Shuvalova, L, Brunzelle, J.S, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-11-13
公開日2015-11-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献1.45 Angstrom Crystal Structure of Bifunctional 2',3'-cyclic Nucleotide 2'-phosphodiesterase/3'-Nucleotidase Periplasmic Precursor Protein from Yersinia pestis with Phosphate bound to the Active site.
To Be Published
3ZK4
DownloadVisualize
BU of 3zk4 by Molmil
Structure of purple acid phosphatase PPD1 isolated from yellow lupin (Lupinus luteus) seeds
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DIPHOSPHONUCLEOTIDE PHOSPHATASE 1, ...
著者Antonyuk, S.V, Strange, R.W.
登録日2013-01-21
公開日2014-01-29
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Structure of a Purple Acid Phosphatase Involved in Plant Growth and Pathogen Defence Exhibits a Novel Immunoglobulin-Like Fold
Iucrj, 1, 2014
8WL6
DownloadVisualize
BU of 8wl6 by Molmil
Structure of 1,3-beta-glucan synthase component FKS1
分子名称: 1,3-beta-glucan synthase component FKS1
著者Li, J.L, Zhu, A.Q, Liu, J.X, Dai, X.L, Wang, X, Yan, C.Y, Deng, D.
登録日2023-09-29
公開日2025-02-19
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Cryo-EM structure of the beta-1,3-glucan synthase FKS1-Rho1 complex.
Nat Commun, 16, 2025
8WLA
DownloadVisualize
BU of 8wla by Molmil
Cryo-EM structure of the beta-1,3-glucan synthase FKS1-Rho1 complex
分子名称: 1,3-beta-glucan synthase component FKS1, GTP-binding protein RHO1
著者Li, J.L, Zhu, A.Q, Liu, J.X, Dai, X.L, Yan, C.Y, Deng, D, Wang, X.
登録日2023-09-29
公開日2025-02-19
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of the beta-1,3-glucan synthase FKS1-Rho1 complex.
Nat Commun, 16, 2025
8BOE
DownloadVisualize
BU of 8boe by Molmil
Human Carbonic Anhydrase I in complex with (S)-4-(3-(1-(6-nitropyridin-2-yl)pyrrolidin-3-yl)thioureido)benzenesulfonamide
分子名称: 1-[(3~{R})-1-(6-nitropyridin-2-yl)pyrrolidin-3-yl]-3-(4-sulfamoylphenyl)thiourea, Carbonic anhydrase 2, GLYCEROL, ...
著者Angeli, A, Ferraroni, M.
登録日2022-11-15
公開日2023-11-29
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献First-in-Class Dual Hybrid Carbonic Anhydrase Inhibitors and Transient Receptor Potential Vanilloid 1 Agonists Revert Oxaliplatin-Induced Neuropathy.
J.Med.Chem., 66, 2023
3NVS
DownloadVisualize
BU of 3nvs by Molmil
1.02 Angstrom resolution crystal structure of 3-phosphoshikimate 1-carboxyvinyltransferase from Vibrio cholerae in complex with shikimate-3-phosphate (partially photolyzed) and glyphosate
分子名称: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, 3-phosphoshikimate 1-carboxyvinyltransferase, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Minasov, G, Light, S.H, Halavaty, A, Shuvalova, G, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2010-07-08
公開日2010-07-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.021 Å)
主引用文献1.02 Angstrom Resolution Crystal Structure of 3-Phosphoshikimate 1-Carboxyvinyltransferase from Vibrio cholerae in complex with Shikimate-3-Phosphate (Partially Photolyzed) and Glyphosate
TO BE PUBLISHED
2K04
DownloadVisualize
BU of 2k04 by Molmil
Structure of SDF1 in complex with the CXCR4 N-terminus containing no sulfotyrosines
分子名称: C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
著者Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
登録日2008-01-24
公開日2008-10-28
最終更新日2024-11-27
実験手法SOLUTION NMR
主引用文献Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12
Sci.Signal., 1, 2008
2K03
DownloadVisualize
BU of 2k03 by Molmil
Structure of SDF1 in complex with the CXCR4 N-terminus containing a sulfotyrosine at postition 21
分子名称: C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
著者Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
登録日2008-01-24
公開日2008-10-28
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12
Sci.Signal., 1, 2008
2K01
DownloadVisualize
BU of 2k01 by Molmil
Structure of a locked SDF1 dimer
分子名称: Stromal cell-derived factor 1
著者Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
登録日2008-01-23
公開日2008-10-28
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12
Sci.Signal., 1, 2008
2K05
DownloadVisualize
BU of 2k05 by Molmil
Structure of SDF1 in complex with the CXCR4 N-terminus containing sulfotyrosines at postitions 7, 12 and 21
分子名称: C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
著者Volkman, B.F, Veldkamp, C.T, Peterson, F.C.
登録日2008-01-24
公開日2008-10-28
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12.
Sci.Signal., 1, 2008
3O0F
DownloadVisualize
BU of 3o0f by Molmil
Crystal structure of a putative metal-dependent phosphoesterase (BAD_1165) from bifidobacterium adolescentis atcc 15703 at 1.94 A resolution
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, FE (III) ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2010-07-19
公開日2010-08-25
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.
Proteins, 79, 2011
3NTC
DownloadVisualize
BU of 3ntc by Molmil
Crystal structure of KD-247 Fab, an anti-V3 antibody that inhibits HIV-1 Entry
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Fab heavy chain, ...
著者Sarafianos, S.G, Kirby, K.A.
登録日2010-07-03
公開日2010-08-25
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis of clade-specific HIV-1 neutralization by humanized anti-V3 monoclonal antibody KD-247.
Faseb J., 29, 2015
3NUU
DownloadVisualize
BU of 3nuu by Molmil
phosphoinositide-dependent kinase-1 (PDK1) with fragment11
分子名称: 3,4-dihydroisoquinolin-1(2H)-one, GLYCEROL, PkB-like, ...
著者Campobasso, N, Ward, P.
登録日2010-07-07
公開日2011-05-25
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.9803 Å)
主引用文献Aminoindazole PDK1 Inhibitors: A Case Study in Fragment-Based Drug Discovery.
ACS Med Chem Lett, 1, 2010
4WZ4
DownloadVisualize
BU of 4wz4 by Molmil
Crystal structure of P. aeruginosa AmpC
分子名称: Beta-lactamase, GLYCEROL, {(3R)-6-[(3-amino-1,2,4-thiadiazol-5-yl)oxy]-1-hydroxy-4,5-dimethyl-1,3-dihydro-2,1-benzoxaborol-3-yl}acetic acid
著者Ferguson, A.D.
登録日2014-11-18
公開日2015-08-05
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献4,5-Disubstituted 6-Aryloxy-1,3-dihydrobenzo[c][1,2]oxaboroles Are Broad-Spectrum Serine beta-Lactamase Inhibitors.
ACS Infect Dis, 1, 2015
6Q3R
DownloadVisualize
BU of 6q3r by Molmil
ASPERGILLUS ACULEATUS GALACTANASE
分子名称: 1,2-ETHANEDIOL, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, ACETATE ION, ...
著者Muderspach, S.J, Torpenholt, S, Lo Leggio, L, Poulsen, J.C.N.
登録日2018-12-04
公開日2019-06-12
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structure of Aspergillus aculeatus beta-1,4-galactanase in complex with galactobiose.
Acta Crystallogr.,Sect.F, 75, 2019
6YTW
DownloadVisualize
BU of 6ytw by Molmil
CLK3 bound with benzothiazole Tg003 (Cpd 2)
分子名称: (1~{Z})-1-(3-ethyl-5-methoxy-1,3-benzothiazol-2-ylidene)propan-2-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Schroeder, M, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-04-24
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DFG-1 Residue Controls Inhibitor Binding Mode and Affinity, Providing a Basis for Rational Design of Kinase Inhibitor Selectivity.
J.Med.Chem., 63, 2020

237992

件を2025-06-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon