PDB: 225399 件ウェブページステータス検索Chemie searchBIRD

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2WV3	Neuroplastin-55 binds to and signals through the fibroblast growth factor receptor 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, NEUROPLASTIN 著者 Soroka, V, Owczarek, S, Kastrup, J.S, Berezin, V, Bock, E, Gajhede, M. 登録日 2009-10-13 公開日 2009-12-15 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Neuroplastin-55 Binds to and Signals Through the Fibroblast Growth Factor Receptor Faseb J., 24, 2010
5B41	Crystal structure of VDR-LBD complexed with 2-methylidene-19-nor-1a,25-dihydroxyvitamin D3 分子名称: (1R,3R)-5-(2-((1R,3aS,7aR,E)-1-((R)-6-hydroxy-6-methylheptan-2-yl)-7a-methyloctahydro-4H-inden-4-ylidene)ethylidene)-2- methylenecyclohexane-1,3-diol, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor 著者 Anami, Y, Itoh, T, Yamamoto, K. 登録日 2016-03-23 公開日 2016-12-07 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Apo- and Antagonist-Binding Structures of Vitamin D Receptor Ligand-Binding Domain Revealed by Hybrid Approach Combining Small-Angle X-ray Scattering and Molecular Dynamics J.Med.Chem., 59, 2016
1KB4	Crystal Structure of VDR DNA-binding Domain Bound to a Canonical Direct Repeat with Three Base Pair Spacer (DR3) Response Element 分子名称: 5'-D(*CP*AP*CP*AP*GP*GP*TP*CP*AP*CP*GP*AP*AP*GP*GP*TP*CP*A)-3', 5'-D(*TP*GP*AP*CP*CP*TP*TP*CP*GP*TP*GP*AP*CP*CP*TP*GP*TP*G)-3', Vitamin D3 Receptor, ... 著者 Shaffer, P.L, Gewirth, D.T. 登録日 2001-11-05 公開日 2002-05-03 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis of VDR-DNA interactions on direct repeat response elements. EMBO J., 21, 2002
1PO2	POLIOVIRUS (TYPE 1, MAHONEY) IN COMPLEX WITH R77975, AN INHIBITOR OF VIRAL REPLICATION 分子名称: (METHYLPYRIDAZINE PIPERIDINE ETHYLOXYPHENYL)ETHYLACETATE, MYRISTIC ACID, POLIOVIRUS TYPE 1 MAHONEY 著者 Hiremath, C.N, Filman, D.J, Grant, R.A, Hogle, J.M. 登録日 1997-01-08 公開日 1997-12-03 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Ligand-induced conformational changes in poliovirus-antiviral drug complexes. Acta Crystallogr.,Sect.D, 53, 1997
1PUO	Crystal structure of Fel d 1- the major cat allergen 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Major allergen I polypeptide, fused chain 2, ... 著者 Kaiser, L, Gronlund, H, Sandalova, T, Ljunggren, H.G, van Hage-Hamsten, M, Achour, A, Schneider, G. 登録日 2003-06-25 公開日 2003-10-14 最終更新日 2019-07-03 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 The crystal structure of the major cat allergen Fel d 1, a member of the secretoglobin family. J.Biol.Chem., 278, 2003
1KB6	Crystal Structure of VDR DNA-binding Domain Bound to Rat Osteocalcin (OC) Response Element 分子名称: 5'-D(*CP*AP*CP*GP*GP*GP*TP*GP*AP*AP*TP*GP*AP*GP*GP*AP*CP*A)-3', 5'-D(*TP*GP*TP*CP*CP*TP*CP*AP*TP*TP*CP*AP*CP*CP*CP*GP*TP*G)-3', Vitamin D3 Receptor, ... 著者 Shaffer, P.L, Gewirth, D.T. 登録日 2001-11-05 公開日 2002-05-03 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural basis of VDR-DNA interactions on direct repeat response elements. EMBO J., 21, 2002
3IRW	Structure of a c-di-GMP riboswitch from V. cholerae 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ... 著者 Smith, K.D. 登録日 2009-08-24 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural basis of ligand binding by a c-di-GMP riboswitch. Nat.Struct.Mol.Biol., 16, 2009
3VZM	Crystal structure of the Bacillus circulans endo-beta-(1,4)-xylanase (BcX) E172H mutant with Glu78 covalently bonded to 2-deoxy-2-fluoro-xylobiose 分子名称: Endo-1,4-beta-xylanase, beta-D-xylopyranose-(1-4)-1,5-anhydro-2-deoxy-2-fluoro-D-xylitol 著者 Ludwiczek, M.L, D'Angelo, I, Yalloway, G.N, Okon, M, Nielsen, J.E, Strynadka, N.C, Withers, S.G, McIntosh, L.P. 登録日 2012-10-15 公開日 2013-05-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Strategies for modulating the pH-dependent activity of a family 11 glycoside hydrolase Biochemistry, 52, 2013
5EXZ	Crystal structure of purified recombinant CPV1 Polyhedra 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, ... 著者 Boudes, M, Garriga, D, Coulibaly, F. 登録日 2015-11-24 公開日 2016-05-25 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A pipeline for structure determination of in vivo-grown crystals using in cellulo diffraction. Acta Crystallogr D Struct Biol, 72, 2016
1K9I	Complex of DC-SIGN and GlcNAc2Man3 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose, CALCIUM ION, mDC-SIGN1B type I isoform 著者 Feinberg, H, Mitchell, D.A, Drickamer, K, Weis, W.I. 登録日 2001-10-29 公開日 2001-12-21 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for selective recognition of oligosaccharides by DC-SIGN and DC-SIGNR. Science, 294, 2001
7L2V	cryo-EM structure of RTX-bound minimal TRPV1 with NMDG at state b 分子名称: 6-deoxy-6-(methylamino)-D-galactitol, SODIUM ION, Transient receptor potential cation channel subfamily V member 1, ... 著者 Zhang, K, Julius, D, Cheng, Y. 登録日 2020-12-17 公開日 2021-09-22 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.64 Å) 主引用文献 Structural snapshots of TRPV1 reveal mechanism of polymodal functionality. Cell, 184, 2021
3VZO	Crystal structure of the Bacillus circulans endo-beta-(1,4)-xylanase (BcX) N35H mutant with Glu78 covalently bonded to 2-deoxy-2-fluoro-xylobiose 分子名称: Endo-1,4-beta-xylanase, SULFATE ION, beta-D-xylopyranose-(1-4)-1,5-anhydro-2-deoxy-2-fluoro-D-xylitol 著者 Ludwiczek, M.L, D'Angelo, I, Yalloway, G.N, Okon, M, Nielsen, J.E, Strynadka, N.C, Withers, S.G, McIntosh, L.P. 登録日 2012-10-15 公開日 2013-05-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Strategies for modulating the pH-dependent activity of a family 11 glycoside hydrolase Biochemistry, 52, 2013
1KKT	Structure of P. citrinum alpha 1,2-mannosidase reveals the basis for differences in specificity of the ER and Golgi Class I enzymes 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mannosyl-oligosaccharide alpha-1,2-mannosidase, ... 著者 Lobsanov, Y.D, Vallee, F, Imberty, A, Yoshida, T, Yip, P, Herscovics, A, Howell, P.L. 登録日 2001-12-10 公開日 2002-01-23 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of Penicillium citrinum alpha 1,2-mannosidase reveals the basis for differences in specificity of the endoplasmic reticulum and Golgi class I enzymes. J.Biol.Chem., 277, 2002
3FKU	Crystal structure of influenza hemagglutinin (H5) in complex with a broadly neutralizing antibody F10 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, Neutralizing antibody F10, ... 著者 Hwang, W.C, Santelli, E, Stec, B, Wei, G, Cadwell, G, Bankston, L.A, Sui, J, Perez, S, Aird, D, Chen, L.M, Ali, M, Murakami, A, Yammanuru, A, Han, T, Cox, N, Donis, R.O, Liddington, R.C, Marasco, W.A. 登録日 2008-12-17 公開日 2009-02-24 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural and functional bases for broad-spectrum neutralization of avian and human influenza A viruses. Nat.Struct.Mol.Biol., 16, 2009
1FPI	FRUCTOSE-1,6-BISPHOSPHATASE (D-FRUCTOSE-1,6-BISPHOSPHATE 1-PHOSPHOHYDROLASE) COMPLEXED WITH AMP, 2,5-ANHYDRO-D-GLUCITOL-1,6-BISPHOSPHATE AND POTASSIUM IONS (100 MM) 分子名称: 2,5-anhydro-1,6-di-O-phosphono-D-glucitol, ADENOSINE MONOPHOSPHATE, FRUCTOSE-1,6-BISPHOSPHATASE, ... 著者 Villeret, V, Lipscomb, W.N. 登録日 1995-06-02 公開日 1996-06-20 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystallographic evidence for the action of potassium, thallium, and lithium ions on fructose-1,6-bisphosphatase. Proc.Natl.Acad.Sci.USA, 92, 1995
4D69	SOYBEAN AGGLUTININ FROM GLYCINE MAX IN COMPLEX WITH THE ANTIGEN Tn 分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LECTIN, ... 著者 Madariaga, D, Martinez-Saez, N, Somovilla, V.J, Coelho, H, Valero-Gonzalez, J, Castro-Lopez, J, Asensio, J.L, Jimenez-Barbero, J, Busto, J.H, Avenoza, A, Marcelo, F, Hurtado-Guerrero, R, Corzana, F, Peregrina, J.M. 登録日 2014-11-10 公開日 2014-11-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Detection of Tumor-Associated Glycopeptides by Lectins: The Peptide Context Modulates Carbohydrate Recognition. Acs Chem.Biol., 10, 2015
4D92	Salmonella typhimurium D-Cysteine desulfhydrase soaked with beta-chloro-D-alanine shows pyruvate bound 4 A away from active site 分子名称: BENZAMIDINE, D-cysteine desulfhydrase, PYRUVIC ACID, ... 著者 Bharath, S.R, Shveta, B, Rajesh, K.H, Savithri, H.S, Murthy, M.R.N. 登録日 2012-01-11 公開日 2012-05-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Structural and Mutational Studies on Substrate Specificity and Catalysis of Salmonella typhimurium D-Cysteine Desulfhydrase. Plos One, 7, 2012
1PIV	BINDING OF THE ANTIVIRAL DRUG WIN51711 TO THE SABIN STRAIN OF TYPE 3 POLIOVIRUS: STRUCTURAL COMPARISON WITH DRUG BINDING IN RHINOVIRUS 14 分子名称: 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE, MYRISTIC ACID, POLIOVIRUS TYPE 3 (SUBUNIT VP1), ... 著者 Hiremath, C.N, Grant, R.A, Filman, D.J, Hogle, J.M. 登録日 1995-02-02 公開日 1995-06-03 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Binding of the antiviral drug WIN51711 to the sabin strain of type 3 poliovirus: structural comparison with drug binding in rhinovirus 14. Acta Crystallogr.,Sect.D, 51, 1995
5EXY	Crystal structure of in cellulo recombinant CPV1 Polyhedra 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, ... 著者 Boudes, M, Garriga, D, Coulibaly, F. 登録日 2015-11-24 公開日 2016-05-25 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 A pipeline for structure determination of in vivo-grown crystals using in cellulo diffraction. Acta Crystallogr D Struct Biol, 72, 2016
4D99	Salmonella typhimurium D-Cysteine desulfhydrase with L-ser bound non-covalently at the active site 分子名称: BENZAMIDINE, D-cysteine desulfhydrase, SERINE, ... 著者 Bharath, S.R, Shveta, B, Rajesh, K.H, Savithri, H.S, Murthy, M.R.N. 登録日 2012-01-11 公開日 2012-05-30 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Structural and Mutational Studies on Substrate Specificity and Catalysis of Salmonella typhimurium D-Cysteine Desulfhydrase. Plos One, 7, 2012
1FIH	N-ACETYLGALACTOSAMINE BINDING MUTANT OF MANNOSE-BINDING PROTEIN A (QPDWG-HDRPY), COMPLEX WITH N-ACETYLGALACTOSAMINE 分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, CHLORIDE ION, ... 著者 Feinberg, H, Torgerson, D, Drickamer, K, Weis, W.I. 登録日 2000-08-03 公開日 2000-08-23 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Mechanism of pH-dependent N-acetylgalactosamine binding by a functional mimic of the hepatocyte asialoglycoprotein receptor. J.Biol.Chem., 275, 2000
6JLI	Crystal structure of CTLD7 domain of human PLA2R 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Secretory phospholipase A2 receptor 著者 Yu, B, Hu, Z, Kong, D, Cheng, C, He, Y. 登録日 2019-03-06 公開日 2019-07-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.778 Å) 主引用文献 Crystal structure of the CTLD7 domain of human M-type phospholipase A2 receptor. J.Struct.Biol., 207, 2019
4MX7	Structure of mouse CD1d in complex with dioleoyl-phosphatidic acid 分子名称: (2R)-3-(phosphonooxy)propane-1,2-diyl (9Z,9'Z)bis-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Zajonc, D.M, Wang, J. 登録日 2013-09-25 公開日 2014-10-01 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 TBN To be Published
1FKK	ATOMIC STRUCTURE OF FKBP12, AN IMMUNOPHILIN BINDING PROTEIN 分子名称: FK506 BINDING PROTEIN, SULFATE ION 著者 Wilson, K.P, Sintchak, M.D, Thomson, J.A, Navia, M.A. 登録日 1995-08-18 公開日 1995-12-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Comparative X-ray structures of the major binding protein for the immunosuppressant FK506 (tacrolimus) in unliganded form and in complex with FK506 and rapamycin. Acta Crystallogr.,Sect.D, 51, 1995
2WXG	The crystal structure of the murine class IA PI 3-kinase p110delta in complex with SW13. 分子名称: 2-{[4-amino-3-(3-fluoro-5-hydroxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]methyl}-5-methyl-3-(2-methylphenyl)quinazolin-4(3H)-one, PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT DELTA ISOFORM 著者 Berndt, A, Miller, S, Williams, O, Lee, D.D, Houseman, B.T, Pacold, J.I, Gorrec, F, Hon, W.-C, Liu, Y, Rommel, C, Gaillard, P, Ruckle, T, Schwarz, M.K, Shokat, K.M, Shaw, J.P, Williams, R.L. 登録日 2009-11-09 公開日 2010-01-12 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The P110D Structure: Mechanisms for Selectivity and Potency of New Pi(3)K Inhibitors Nat.Chem.Biol., 6, 2010

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