Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3BUJ
DownloadVisualize
BU of 3buj by Molmil
Crystal Structure of CalO2
分子名称: CalO2, PROTOPORPHYRIN IX CONTAINING FE
著者McCoy, J.G, Johnson, H.D, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N.
登録日2008-01-02
公開日2008-04-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structural characterization of CalO2: a putative orsellinic acid P450 oxidase in the calicheamicin biosynthetic pathway.
Proteins, 74, 2009
7ZXY
DownloadVisualize
BU of 7zxy by Molmil
3.15 Angstrom cryo-EM structure of the dimeric cytochrome b6f complex from Synechocystis sp. PCC 6803 with natively bound plastoquinone and lipid molecules.
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, CHLOROPHYLL A, Cytochrome B6, ...
著者Malone, L.A, Procter, M.S, Farmer, D.F, Swainsbury, D.J.K, Hawkings, F.R, Pastorelli, F, Emrich-Mills, T.Z, Siebert, A, Hunter, C.N, Hitchcock, A, Johnson, M.P.
登録日2022-05-23
公開日2022-07-06
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Cryo-EM structures of the Synechocystis sp. PCC 6803 cytochrome b6f complex with and without the regulatory PetP subunit.
Biochem.J., 479, 2022
8FKP
DownloadVisualize
BU of 8fkp by Molmil
Human nucleolar pre-60S ribosomal subunit (State A1)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L13, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKR
DownloadVisualize
BU of 8fkr by Molmil
Human nucleolar pre-60S ribosomal subunit (State B1)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L12, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKT
DownloadVisualize
BU of 8fkt by Molmil
Human nucleolar pre-60S ribosomal subunit (State C1)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKV
DownloadVisualize
BU of 8fkv by Molmil
Human nucleolar pre-60S ribosomal subunit (State D1)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
4U9G
DownloadVisualize
BU of 4u9g by Molmil
Crystal structure of an H-NOX protein from S. oneidensis in the Fe(II)CO ligation state, Q154A/Q155A/K156A mutant
分子名称: CARBON MONOXIDE, NO-binding heme-dependent sensor protein, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Herzik Jr, M.A, Jonnalagadda, R, Kuriyan, J, Marletta, M.A.
登録日2014-08-06
公開日2014-10-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
4U9K
DownloadVisualize
BU of 4u9k by Molmil
Crystal structure of an H-NOX protein from S. oneidensis in the Mn(II)NO ligation state, Q154A/Q155A/K156A mutant
分子名称: MANGANESE PROTOPORPHYRIN IX, NITRIC OXIDE, NO-binding heme-dependent sensor protein, ...
著者Herzik Jr, M.A, Jonnalagadda, R, Kuriyan, J, Marletta, M.A.
登録日2014-08-06
公開日2014-10-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
4U99
DownloadVisualize
BU of 4u99 by Molmil
Crystal structure of an H-NOX protein from S. oneidensis in the Fe(II) ligation state, Q154A/Q155A/K156A mutant
分子名称: NO-binding heme-dependent sensor protein, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
著者Herzik Jr, M.A, Jonnalagadda, R, Kuriyan, J, Marletta, M.A.
登録日2014-08-05
公開日2014-10-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
4U9J
DownloadVisualize
BU of 4u9j by Molmil
Crystal structure of an H-NOX protein from S. oneidensis in the Mn(II) ligation state, Q154A/Q155A/K156A mutant
分子名称: MANGANESE PROTOPORPHYRIN IX, NO-binding heme-dependent sensor protein, SODIUM ION, ...
著者Herzik Jr, M.A, Jonnalagadda, R, Kuriyan, J, Marletta, M.A.
登録日2014-08-06
公開日2014-10-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
4U9B
DownloadVisualize
BU of 4u9b by Molmil
Crystal structure of an H-NOX protein from S. oneidensis in the Fe(II)NO ligation state
分子名称: GLYCEROL, NITRIC OXIDE, NO-binding heme-dependent sensor protein, ...
著者Herzik Jr, M.A, Jonnalagadda, R, Kuriyan, J, Marletta, M.A.
登録日2014-08-05
公開日2014-10-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
6ZME
DownloadVisualize
BU of 6zme by Molmil
SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-02
公開日2020-08-12
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020
8GXJ
DownloadVisualize
BU of 8gxj by Molmil
Pseudomonas aeruginosa N-acetyltransferase domain-containing protein PA3270
分子名称: N-acetyltransferase domain-containing protein
著者Song, Y.J, Bao, R.
登録日2022-09-20
公開日2022-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献The novel type II toxin-antitoxin PacTA modulates Pseudomonas aeruginosa iron homeostasis by obstructing the DNA-binding activity of Fur.
Nucleic Acids Res., 50, 2022
4AWX
DownloadVisualize
BU of 4awx by Molmil
Moonlighting functions of FeoC in the regulation of ferrous iron transport in Feo
分子名称: FERROUS IRON TRANSPORT PROTEIN B, FERROUS IRON TRANSPORT PROTEIN C, NICKEL (II) ION, ...
著者Hung, K.-W, Tsai, J.-Y, Juan, T.-H, Hsu, Y.-L, Hsiao, C.D, Huang, T.-H.
登録日2012-06-06
公開日2013-03-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the Klebsiella Pneumoniae Nfeob/Feoc Complex and Roles of Feoc in Regulation of Fe2+ Transport by the Bacterial Feo System.
J.Bacteriol., 194, 2012
3A1U
DownloadVisualize
BU of 3a1u by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in GMPPNP form
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Iron(II) transport protein B, MAGNESIUM ION, ...
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3A1S
DownloadVisualize
BU of 3a1s by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in GDP form I
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-DIPHOSPHATE, ...
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3A1V
DownloadVisualize
BU of 3a1v by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in apo form
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
3A1T
DownloadVisualize
BU of 3a1t by Molmil
Crystal structue of the cytosolic domain of T. maritima FeoB iron iransporter in GDP form II
分子名称: GUANOSINE-5'-DIPHOSPHATE, Iron(II) transport protein B
著者Hattori, M, Ishitani, R, Nureki, O.
登録日2009-04-22
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of novel interactions between the small-GTPase and GDI-like domains in prokaryotic FeoB iron transporter
Structure, 17, 2009
7DVV
DownloadVisualize
BU of 7dvv by Molmil
Heme sensor protein PefR from Streptococcus agalactiae bound to operator DNA (28-mer)
分子名称: DNA (28-MER), HTH marR-type domain-containing protein
著者Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H.
登録日2021-01-15
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.
Commun Biol, 4, 2021
7DVU
DownloadVisualize
BU of 7dvu by Molmil
Crystal structure of heme sensor protein PefR in complex with heme and cyanide
分子名称: CYANIDE ION, HTH marR-type domain-containing protein, PROTOPORPHYRIN IX CONTAINING FE
著者Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H.
登録日2021-01-15
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.
Commun Biol, 4, 2021
7DVR
DownloadVisualize
BU of 7dvr by Molmil
Crystal structure of heme sensor protein PefR from Streptococcus agalactiae in complex with heme
分子名称: COBALT (II) ION, HTH marR-type domain-containing protein, PROTOPORPHYRIN IX CONTAINING FE
著者Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H.
登録日2021-01-15
公開日2021-09-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.
Commun Biol, 4, 2021
7DVT
DownloadVisualize
BU of 7dvt by Molmil
Crystal structure of heme sensor protein PefR in complex with heme and carbon monoxide
分子名称: CARBON MONOXIDE, HTH marR-type domain-containing protein, PROTOPORPHYRIN IX CONTAINING FE
著者Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H.
登録日2021-01-15
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.
Commun Biol, 4, 2021
3DH8
DownloadVisualize
BU of 3dh8 by Molmil
Structure of Pseudomonas Quinolone Signal Response Protein PqsE
分子名称: FE (III) ION, Uncharacterized protein PA1000, bis(4-nitrophenyl) hydrogen phosphate
著者Yu, S, Blankenfeldt, W.
登録日2008-06-17
公開日2009-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009
2Q0I
DownloadVisualize
BU of 2q0i by Molmil
Structure of Pseudomonas Quinolone Signal Response Protein PqsE
分子名称: BENZOIC ACID, FE (III) ION, Quinolone signal response protein
著者Yu, S, Jensen, V, Feldmann, I, Haussler, S, Blankenfeldt, W.
登録日2007-05-22
公開日2008-06-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009
2Q0J
DownloadVisualize
BU of 2q0j by Molmil
Structure of Pseudomonas Quinolone Signal Response Protein PqsE
分子名称: BENZOIC ACID, FE (III) ION, Quinolone signal response protein
著者Yu, S, Jensen, V, Feldmann, I, Haussler, S, Blankenfeldt, W.
登録日2007-05-22
公開日2008-06-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon