Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8RSC
DownloadVisualize
BU of 8rsc by Molmil
p97 (VCP) mutant - F539A
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Arie, M, Matzov, D, Karmona, R, Szenkier, N, Stanhill, A, Navon, A.
登録日2024-01-24
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献p97 (VCP) mutant - F539A
To Be Published
3QQ8
DownloadVisualize
BU of 3qq8 by Molmil
Crystal structure of p97-N in complex with FAF1-UBX
分子名称: CHLORIDE ION, FAS-associated factor 1, Transitional endoplasmic reticulum ATPase
著者Haenzelmann, P, Schindelin, H.
登録日2011-02-15
公開日2011-06-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Hierarchical Binding of Cofactors to the AAA ATPase p97.
Structure, 19, 2011
5KIY
DownloadVisualize
BU of 5kiy by Molmil
p97 ND1-A232E in complex with VIMP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Selenoprotein S, ...
著者Tang, W.K, Xia, D.
登録日2016-06-17
公開日2017-12-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural basis for nucleotide-modulated p97 association with the ER membrane.
Cell Discov, 3, 2017
5IFW
DownloadVisualize
BU of 5ifw by Molmil
Quantitative interaction mapping reveals an extended ubiquitin regulatory domain in ASPL that disrupts functional p97 hexamers and induces cell death
分子名称: ADENOSINE-5'-DIPHOSPHATE, Tether containing UBX domain for GLUT4, Transitional endoplasmic reticulum ATPase
著者Roske, Y, Heinemann, U.
登録日2016-02-26
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Quantitative interaction mapping reveals an extended UBX domain in ASPL that disrupts functional p97 hexamers.
Nat Commun, 7, 2016
3QQ7
DownloadVisualize
BU of 3qq7 by Molmil
Crystal Structure of the p97 N-terminal domain
分子名称: CHLORIDE ION, COBALT (II) ION, GLYCEROL, ...
著者Haenzelmann, P, Schindelin, H.
登録日2011-02-15
公開日2011-06-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Hierarchical Binding of Cofactors to the AAA ATPase p97.
Structure, 19, 2011
4KDL
DownloadVisualize
BU of 4kdl by Molmil
Crystal structure of p97/VCP N in complex with OTU1 UBXL
分子名称: Transitional endoplasmic reticulum ATPase, Ubiquitin thioesterase OTU1
著者Kim, S.J, Kim, E.E.
登録日2013-04-25
公開日2014-03-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural Basis for Ovarian Tumor Domain-containing Protein 1 (OTU1) Binding to p97/Valosin-containing Protein (VCP).
J.Biol.Chem., 289, 2014
4KO8
DownloadVisualize
BU of 4ko8 by Molmil
Structure of p97 N-D1 R155H mutant in complex with ATPgS
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Xia, D, Tang, W.K.
登録日2013-05-11
公開日2013-11-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants.
J.Biol.Chem., 288, 2013
4KLN
DownloadVisualize
BU of 4kln by Molmil
Structure of p97 N-D1 A232E mutant in complex with ATPgS
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Xia, D, Tang, W.K.
登録日2013-05-07
公開日2013-11-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants.
J.Biol.Chem., 288, 2013
4KOD
DownloadVisualize
BU of 4kod by Molmil
Structure of p97 N-D1 R155H mutant in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Xia, D, Tang, W.K.
登録日2013-05-11
公開日2013-11-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants.
J.Biol.Chem., 288, 2013
4KDI
DownloadVisualize
BU of 4kdi by Molmil
Crystal structure of p97/VCP N in complex with OTU1 UBXL
分子名称: Transitional endoplasmic reticulum ATPase, Ubiquitin thioesterase OTU1
著者Kim, S.J, Kim, E.E.
登録日2013-04-25
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural Basis for Ovarian Tumor Domain-containing Protein 1 (OTU1) Binding to p97/Valosin-containing Protein (VCP).
J.Biol.Chem., 289, 2014
7WUB
DownloadVisualize
BU of 7wub by Molmil
Cryo-EM structure of dodecamer P97
分子名称: 3-[3-cyclopentylsulfanyl-5-[[3-methyl-4-(4-methylsulfonylphenyl)phenoxy]methyl]-1,2,4-triazol-4-yl]pyridine, ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Liu, S, Wang, T.
登録日2022-02-08
公開日2022-03-23
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structure of dodecamer P97 at 2.99 Angstroms resolution
To Be Published
7VCU
DownloadVisualize
BU of 7vcu by Molmil
Human p97 double hexamer conformer I with D1-ATPgammaS and D2-ADP bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-04
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCT
DownloadVisualize
BU of 7vct by Molmil
Human p97 single hexamer conformer III with D1-ATPgammaS and D2-ADP bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-04
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCX
DownloadVisualize
BU of 7vcx by Molmil
Human p97 single hexamer conformer II with ATPgammaS bound
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-04
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCS
DownloadVisualize
BU of 7vcs by Molmil
Human p97 double hexamer conformer II with ATPgammaS bound
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-03
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCV
DownloadVisualize
BU of 7vcv by Molmil
Human p97 single hexamer conformer I with ATPgammaS bound
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
登録日2021-09-04
公開日2022-03-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
8UVO
DownloadVisualize
BU of 8uvo by Molmil
Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC804515)
分子名称: ADENOSINE-5'-DIPHOSPHATE, N-[3-(2,5-difluoro-4-{[(4M)-5-(hexylsulfanyl)-4-(pyridin-3-yl)-4H-1,2,4-triazol-3-yl]methoxy}phenyl)prop-2-yn-1-yl]propanamide, Transitional endoplasmic reticulum ATPase
著者Nandi, P, DeVore, K, Chiu, P.-L.
登録日2023-11-03
公開日2024-08-21
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Mechanism of allosteric inhibition of human p97/VCP ATPase and its disease mutant by triazole inhibitors.
Commun Chem, 7, 2024
8UVQ
DownloadVisualize
BU of 8uvq by Molmil
Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC819701/down)
分子名称: 2-[(4P)-4-(4-{[(4P)-5-(cyclohexylsulfanyl)-4-(pyridin-3-yl)-4H-1,2,4-triazol-3-yl]methoxy}-2,5-difluorophenyl)-2H-1,2,3-triazol-2-yl]-1-[(2R,6S)-2,6-dimethylmorpholin-4-yl]ethan-1-one, ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Nandi, P, DeVore, K, Chiu, P.-L.
登録日2023-11-03
公開日2024-08-21
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Mechanism of allosteric inhibition of human p97/VCP ATPase and its disease mutant by triazole inhibitors.
Commun Chem, 7, 2024
8UV2
DownloadVisualize
BU of 8uv2 by Molmil
Human p97/VCP structure with a triazole inhibitor (NSC799462/hexamer)
分子名称: 3-(4-{[(4P)-5-{[(1R)-cyclohex-2-en-1-yl]sulfanyl}-4-(pyridin-3-yl)-4H-1,2,4-triazol-3-yl]methoxy}-2,6-difluorophenyl)prop-2-yn-1-yl (1-methylpiperidin-4-yl)carbamate, ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Nandi, P, DeVore, K, Chiu, P.-L.
登録日2023-11-02
公開日2024-08-21
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Mechanism of allosteric inhibition of human p97/VCP ATPase and its disease mutant by triazole inhibitors.
Commun Chem, 7, 2024
8UVP
DownloadVisualize
BU of 8uvp by Molmil
Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC819701/up)
分子名称: 2-[(4P)-4-(4-{[(4P)-5-(cyclohexylsulfanyl)-4-(pyridin-3-yl)-4H-1,2,4-triazol-3-yl]methoxy}-2,5-difluorophenyl)-2H-1,2,3-triazol-2-yl]-1-[(2R,6S)-2,6-dimethylmorpholin-4-yl]ethan-1-one, ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Nandi, P, DeVore, K, Chiu, P.-L.
登録日2023-11-03
公開日2024-08-21
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Mechanism of allosteric inhibition of human p97/VCP ATPase and its disease mutant by triazole inhibitors.
Commun Chem, 7, 2024
5B6C
DownloadVisualize
BU of 5b6c by Molmil
Structural Details of Ufd1 binding to p97
分子名称: Peptide from Ubiquitin fusion degradation protein 1 homolog, Transitional endoplasmic reticulum ATPase
著者Le, L.T.M, Yang, J.K.
登録日2016-05-26
公開日2017-01-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural Details of Ufd1 Binding to p97 and Their Functional Implications in ER-Associated Degradation
PLoS ONE, 11, 2016
6MDO
DownloadVisualize
BU of 6mdo by Molmil
The D1 and D2 domain rings of NSF engaging the SNAP-25 N-terminus within the 20S supercomplex (focused refinement on D1/D2 rings, class 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Synaptosomal-associated protein 25, ...
著者White, K.I, Zhao, M, Brunger, A.T.
登録日2018-09-04
公開日2018-09-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural principles of SNARE complex recognition by the AAA+ protein NSF.
Elife, 7, 2018
5C1B
DownloadVisualize
BU of 5c1b by Molmil
p97-delta709-728 in complex with a UFD1-SHP peptide
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Haenzelmann, P, Schindelin, H.
登録日2015-06-13
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Characterization of an Additional Binding Surface on the p97 N-Terminal Domain Involved in Bipartite Cofactor Interactions.
Structure, 24, 2016
5C1A
DownloadVisualize
BU of 5c1a by Molmil
p97-N750D/R753D/M757D/Q760D in complex with ATP-gamma-S
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
著者Haenzelmann, P, Schindelin, H.
登録日2015-06-13
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural Basis of ATP Hydrolysis and Intersubunit Signaling in the AAA+ ATPase p97.
Structure, 24, 2016
6MDN
DownloadVisualize
BU of 6mdn by Molmil
The 20S supercomplex engaging the SNAP-25 N-terminus (class 2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Alpha-soluble NSF attachment protein, ...
著者White, K.I, Zhao, M, Brunger, A.T.
登録日2018-09-04
公開日2018-09-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural principles of SNARE complex recognition by the AAA+ protein NSF.
Elife, 7, 2018

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon