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8R35
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CryoEM structure of the asymmetric Pho90 dimer from yeast without substrates.
分子名称: Low-affinity phosphate transporter PHO90
著者Schneider, S, Kuehlbrandt, W, Yildiz, O.
登録日2023-11-08
公開日2024-04-24
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Complementary structures of the yeast phosphate transporter Pho90 provide insights into its transport mechanism.
Structure, 32, 2024
8R34
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CryoEM structure of the symmetric Pho90 dimer from yeast with substrates.
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, Low-affinity phosphate transporter PHO90, PHOSPHATE ION, ...
著者Schneider, S, Kuehlbrandt, W, Yildiz, O.
登録日2023-11-08
公開日2024-04-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Complementary structures of the yeast phosphate transporter Pho90 provide insights into its transport mechanism.
Structure, 32, 2024
8R8T
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BU of 8r8t by Molmil
Cryo-EM structure of the inward-facing ethanolamine-bound FLVCR1
分子名称: ETHANOLAMINE, Heme transporter FLVCR1
著者Weng, T.-H, Wu, D, Safarian, S.
登録日2023-11-29
公開日2024-04-17
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Molecular mechanism of choline and ethanolamine transport in humans.
Nature, 630, 2024
3HZZ
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2.4 Angstrom Crystal Structure of Streptomyces collinus crotonyl CoA carboxylase/reductase
分子名称: Crotonyl CoA reductase, SULFATE ION
著者Scarsdale, J.N, Musayev, F.N, Wright, H.T.
登録日2009-06-24
公開日2010-07-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of Streptomycs collinus crotonyl COA carboxylase/reductase
To be Published
8QTA
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BU of 8qta by Molmil
Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase F397A mutant in complex with NADPH
分子名称: FAD-binding FR-type domain-containing protein, FLAVIN-ADENINE DINUCLEOTIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Dubach, V.R.A, San Segundo-Acosta, P, Murphy, B.J.
登録日2023-10-12
公開日2024-07-24
最終更新日2024-11-27
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Structural and mechanistic insights into Streptococcus pneumoniae NADPH oxidase.
Nat.Struct.Mol.Biol., 31, 2024
5C20
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Crystal structure of EV71 3C Proteinase in complex with Compound 2
分子名称: 2-methylpropyl N-[(2S)-1-oxidanylidene-1-[[(2S)-1-oxidanyl-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-3-phenyl-propan-2-yl]carbamate, 3C proteinase
著者Zhang, L, Huang, G, Cai, Q, Zhao, C, Ren, H, Li, P, Li, N, Chen, S, Li, J, Lin, T.
登録日2015-06-15
公開日2016-06-01
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Optimize the interactions at S4 with efficient inhibitors targeting 3C proteinase from enterovirus 71
J.Mol.Recognit., 29, 2016
8QT6
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BU of 8qt6 by Molmil
Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase
分子名称: FAD-binding FR-type domain-containing protein, FLAVIN-ADENINE DINUCLEOTIDE, PROTOPORPHYRIN IX CONTAINING FE
著者Dubach, V.R.A, San Segundo-Acosta, P, Murphy, B.J.
登録日2023-10-12
公開日2024-07-24
最終更新日2024-11-27
実験手法ELECTRON MICROSCOPY (2.29 Å)
主引用文献Structural and mechanistic insights into Streptococcus pneumoniae NADPH oxidase.
Nat.Struct.Mol.Biol., 31, 2024
8QT9
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Cryo-EM structure of stably reduced Streptococcus pneumoniae NADPH oxidase in complex with NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FAD-binding FR-type domain-containing protein, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Dubach, V.R.A, San Segundo-Acosta, P, Murphy, B.J.
登録日2023-10-12
公開日2024-07-24
最終更新日2024-11-27
実験手法ELECTRON MICROSCOPY (2.36 Å)
主引用文献Structural and mechanistic insights into Streptococcus pneumoniae NADPH oxidase.
Nat.Struct.Mol.Biol., 31, 2024
8QZP
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Structure of the non-mitochondrial citrate synthase from Ananas comosus
分子名称: Citrate synthase
著者Lo, Y.K, Bohn, S, Sendker, F.L, Schuller, J.M, Hochberg, G.
登録日2023-10-28
公開日2024-07-24
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (4.15 Å)
主引用文献Frequent transitions in self-assembly across the evolution of a central metabolic enzyme.
Biorxiv, 2024
8QT7
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BU of 8qt7 by Molmil
Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase in complex with NADPH
分子名称: FAD-binding FR-type domain-containing protein, FLAVIN-ADENINE DINUCLEOTIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Dubach, V.R.A, San Segundo-Acosta, P, Murphy, B.J.
登録日2023-10-12
公開日2024-07-24
最終更新日2024-11-27
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Structural and mechanistic insights into Streptococcus pneumoniae NADPH oxidase.
Nat.Struct.Mol.Biol., 31, 2024
4ZRZ
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PlyCB mutant R66E
分子名称: PlyCB
著者Gallagher, D.T, Nelson, D.C, Shen, Y.
登録日2015-05-12
公開日2016-09-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献A bacteriophage endolysin that eliminates intracellular streptococci.
Elife, 5, 2016
4ZZ7
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Crystal structure of methylmalonate-semialdehyde dehydrogenase (DddC) from Oceanimonas doudoroffii
分子名称: Methylmalonate-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Do, H, Lee, C.W, Lee, S.G, Kang, H, Park, C.M, Kim, H.J, Park, H, Park, H, Lee, J.H.
登録日2015-05-22
公開日2016-04-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure and modeling of the tetrahedral intermediate state of methylmalonate-semialdehyde dehydrogenase (MMSDH) from Oceanimonas doudoroffii.
J. Microbiol., 54, 2016
3HO7
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BU of 3ho7 by Molmil
Crystal structure of OxyR from Porphyromonas gingivalis
分子名称: OxyR
著者Svintradze, D.V, Wright, H.T, Lewis, J.P.
登録日2009-06-01
公開日2010-06-09
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structures of the Porphyromonas gingivalis OxyR regulatory domain explain differences in expression of the OxyR regulon in Escherichia coli and P. gingivalis.
Acta Crystallogr.,Sect.D, 69, 2013
5A2B
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BU of 5a2b by Molmil
Crystal Structure of Anoxybacillus Alpha-amylase Provides Insights into a New Glycosyl Hydrolase Subclass
分子名称: ANOXYBACILLUS ALPHA-AMYLASE, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Ng, C.L, Chai, K.P, Othman, N.F, Teh, A.H, Ho, K.L, Chan, K.G, Goh, K.M.
登録日2015-05-17
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of Anoxybacillus Alpha-Amylase Provides Insights Into Maltose Binding of a New Glycosyl Hydrolase Subclass.
Sci.Rep., 6, 2016
5C1E
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BU of 5c1e by Molmil
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CHLORIDE ION, ...
著者Jameson, G.B, Williams, M.A.K, Loo, T.S, Kent, L.M, Melton, L.D, Mercadante, D.
登録日2015-06-13
公開日2015-07-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and Properties of a Non-processive, Salt-requiring, and Acidophilic Pectin Methylesterase from Aspergillus niger Provide Insights into the Key Determinants of Processivity Control.
J.Biol.Chem., 291, 2016
8QPL
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F420-Dependent Methylene-Tetrahydromethanopterin Reductase with F420 from Methanocaldococcus jannaschii
分子名称: 5,10-methylenetetrahydromethanopterin reductase, COENZYME F420
著者Gehl, M, Demmer, U, Ermler, U, Shima, S.
登録日2023-10-02
公開日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mutational and structural studies of ( beta alpha ) 8 -barrel fold methylene-tetrahydropterin reductases utilizing a common catalytic mechanism.
Protein Sci., 33, 2024
3G29
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BU of 3g29 by Molmil
Crystal structure of the C-terminal domain of the Rous Sarcoma Virus capsid protein: D179N mutant, neutral pH
分子名称: Gag polyprotein
著者Kingston, R.L.
登録日2009-01-30
公開日2009-06-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Proton-linked dimerization of a retroviral capsid protein initiates capsid assembly
Structure, 17, 2009
8QPJ
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FAD-independent Methylene-Tetrahydrofolate Reductase Mutant E9Q from Mycobacterium hassiacum
分子名称: Methylenetetrahydrofolate reductase (NAD(P)H)
著者Gehl, M, Demmer, U, Ermler, U, Shima, S.
登録日2023-10-02
公開日2024-05-29
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mutational and structural studies of ( beta alpha ) 8 -barrel fold methylene-tetrahydropterin reductases utilizing a common catalytic mechanism.
Protein Sci., 33, 2024
3G1I
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BU of 3g1i by Molmil
Crystal structure of the C-terminal domain of the Rous Sarcoma Virus capsid protein: Intermediate pH
分子名称: Gag polyprotein, SULFATE ION
著者Kingston, R.L.
登録日2009-01-29
公開日2009-06-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Proton-linked dimerization of a retroviral capsid protein initiates capsid assembly
Structure, 17, 2009
8QPM
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Structure of methylene-tetrahydromethanopterin reductase from Methanocaldococcus jannaschii
分子名称: 5,10-methylenetetrahydromethanopterin reductase
著者Gehl, M, Demmer, U, Ermler, U, Shima, S.
登録日2023-10-02
公開日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mutational and structural studies of ( beta alpha ) 8 -barrel fold methylene-tetrahydropterin reductases utilizing a common catalytic mechanism.
Protein Sci., 33, 2024
8QQ8
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Crystal Structure of F420-dependent Methylene-Tetrahydromethanopterin Reductase Mutant E6Q from Methanocaldococcus Jannaschii
分子名称: 5,10-methylenetetrahydromethanopterin reductase
著者Gehl, M, Demmer, U, Ermler, U, Shima, S.
登録日2023-10-04
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mutational and structural studies of ( beta alpha ) 8 -barrel fold methylene-tetrahydropterin reductases utilizing a common catalytic mechanism.
Protein Sci., 33, 2024
8QMW
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Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8S8 complex with substitutions R269W, E271R, L273N
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, ...
著者Zarzycki, J, Schulz, L, Erb, T.J, Hochberg, G.K.A.
登録日2023-09-25
公開日2024-10-02
最終更新日2025-01-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Layered entrenchment maintains essentiality in the evolution of Form I Rubisco complexes.
Embo J., 44, 2025
3TFB
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BU of 3tfb by Molmil
Transthyretin natural mutant A25T
分子名称: Transthyretin
著者Azevedo, E.P.C, Pereira, H.M, Garratt, R.C, Kelly, J.W, Foguel, D, Palhano, F.L.
登録日2011-08-15
公開日2011-12-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.033 Å)
主引用文献Dissecting the Structure, Thermodynamic Stability, and Aggregation Properties of the A25T Transthyretin (A25T-TTR) Variant Involved in Leptomeningeal Amyloidosis: Identifying Protein Partners That Co-Aggregate during A25T-TTR Fibrillogenesis in Cerebrospinal Fluid.
Biochemistry, 50, 2011
8QMQ
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Succinic semialdehyde dehydrogenase from E. coli with bound NAD+
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Succinate semialdehyde dehydrogenase [NAD(P)+] Sad
著者He, H, Zarzycki, J, Erb, T.J.
登録日2023-09-25
公開日2024-10-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Adaptive laboratory evolution recruits the promiscuity of succinate semialdehyde dehydrogenase to repair different metabolic deficiencies.
Nat Commun, 15, 2024
8QMV
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L2 forming RubisCO derived from ancestral sequence reconstruction of the last common ancestor of Form I'' and Form I RubisCOs
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, RubisCO large subunit
著者Zarzycki, J, Schulz, L, Erb, T.J, Hochberg, G.K.A.
登録日2023-09-25
公開日2024-10-16
最終更新日2025-01-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Layered entrenchment maintains essentiality in the evolution of Form I Rubisco complexes.
Embo J., 44, 2025

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件を2025-07-09に公開中

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