PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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5MSS	Structure of the A-PCP didomain of carboxylic acid reductase (CAR) from Segniliparus rugosus in complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, SODIUM ION, Thioester reductase domain-containing protein 著者 Gahloth, D, Leys, D. 登録日 2017-01-05 公開日 2017-07-05 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Structures of carboxylic acid reductase reveal domain dynamics underlying catalysis. Nat. Chem. Biol., 13, 2017
3ONE	Crystal structure of Lupinus luteus S-adenosyl-L-homocysteine hydrolase in complex with adenine 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENINE, Adenosylhomocysteinase, ... 著者 Brzezinski, K, Jaskolski, M. 登録日 2010-08-28 公開日 2011-08-31 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 High-resolution structures of complexes of plant S-adenosyl-L-homocysteine hydrolase (Lupinus luteus). Acta Crystallogr.,Sect.D, 68, 2012
8DRX	Product structure of SARS-CoV-2 Mpro C145A mutant in complex with nsp10-nsp11 (C10) cut site sequence (form 2) 分子名称: Fusion protein of 3C-like proteinase nsp5 and nsp10-nsp11 (C10) cut site, SODIUM ION 著者 Lee, J, Kenward, C, Worrall, L.J, Vuckovic, M, Paetzel, M, Strynadka, N.C.J. 登録日 2022-07-21 公開日 2022-09-21 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 X-ray crystallographic characterization of the SARS-CoV-2 main protease polyprotein cleavage sites essential for viral processing and maturation. Nat Commun, 13, 2022
1O68	Crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase 分子名称: 3-METHYL-2-OXOBUTANOIC ACID, 3-methyl-2-oxobutanoate hydroxymethyltransferase, SODIUM ION 著者 Structural GenomiX 登録日 2003-10-23 公開日 2003-11-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005
7CYG	Crystal structure of a cysteine-pair mutant (Y113C-P190C) of a bacterial bile acid transporter before disulfide bond formation 分子名称: Transporter, sodium/bile acid symporter family 著者 Wang, X, Lyu, Y, Ji, Y, Sun, Z, Zhou, X. 登録日 2020-09-03 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.198 Å) 主引用文献 An engineered disulfide bridge traps and validates an outward-facing conformation in a bile acid transporter. Acta Crystallogr D Struct Biol, 77, 2021
6UZM	HLA-B*15:02 complexed with a synthetic peptide 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Beta-2-microglobulin, ... 著者 Schutte, R.J, Li, D, Ostrov, D.A. 登録日 2019-11-15 公開日 2020-11-18 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.798 Å) 主引用文献 HLA-B*15:02 complexed with a synthetic peptide To Be Published
6UY9	Crystal structure of the STAC3 tandem SH3 domains - P269R, W284S 分子名称: 1,2-ETHANEDIOL, SH3 and cysteine-rich domain-containing protein 3, SODIUM ION 著者 Rufenach, B, Van Petegem, F. 登録日 2019-11-12 公開日 2020-06-17 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Multiple Sequence Variants in STAC3 Affect Interactions with CaV1.1 and Excitation-Contraction Coupling. Structure, 28, 2020
5OB7	X-ray structure of the adduct formed upon reaction of lysozyme with the compound fac-[RuII(CO)3Cl2(N3-IM), IM=imidazole (crystal 2) 分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C, ... 著者 Pontillo, N, Ferraro, G, Merlino, A. 登録日 2017-06-26 公開日 2017-07-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Ru-Based CO releasing molecules with azole ligands: interaction with proteins and the CO release mechanism disclosed by X-ray crystallography. Dalton Trans, 46, 2017
7CYK	Crystal structure of a second cysteine-pair mutant (V110C-I197C) of a bacterial bile acid transporter before disulfide bond formation 分子名称: MERCURY (II) ION, Transporter, sodium/bile acid symporter family 著者 Wang, X, Lyu, Y, Ji, Y, Sun, Z, Zhou, X. 登録日 2020-09-03 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.785 Å) 主引用文献 An engineered disulfide bridge traps and validates an outward-facing conformation in a bile acid transporter. Acta Crystallogr D Struct Biol, 77, 2021
5OHQ	Crystal structure of the KOW6-KOW7 domain of human DSIF 分子名称: CHLORIDE ION, SODIUM ION, Transcription elongation factor SPT5 著者 Bernecky, C, Plitzko, J.M, Cramer, P. 登録日 2017-07-17 公開日 2017-09-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.098 Å) 主引用文献 Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp. Nat. Struct. Mol. Biol., 24, 2017
6V2T	X-ray structure of a sugar N-formyltransferase from Shewanella sp FDAARGOS_354 分子名称: 1,2-ETHANEDIOL, FOLIC ACID, PHOSPHATE ION, ... 著者 Girardi, N.M, Thoden, J.B, Holden, H.M. 登録日 2019-11-25 公開日 2020-01-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Misannotations of the genes encoding sugar N-formyltransferases. Protein Sci., 29, 2020
6V9M	Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods 分子名称: 4-fluoro-2-methyl-N-propylbenzene-1-sulfonamide, FORMIC ACID, GLYCEROL, ... 著者 Phan, J, Fesik, S.W. 登録日 2019-12-13 公開日 2020-08-26 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.648 Å) 主引用文献 Discovery of Sulfonamide-Derived Agonists of SOS1-Mediated Nucleotide Exchange on RAS Using Fragment-Based Methods. J.Med.Chem., 63, 2020
5LXW	Atomic resolution X-ray crystal structure of cisplatin bound to hen egg white lysozyme stored for 5 years on the shelf 分子名称: AMMONIA, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 Helliwell, J.R. 登録日 2016-09-22 公開日 2016-10-05 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Atomic resolution X-ray crystal structure of cisplatin bound to hen egg white lysozyme stored for 5 years 'on the shelf' Zenodo, 2016
191D	CRYSTAL STRUCTURE OF INTERCALATED FOUR-STRANDED D(C3T) 分子名称: DNA (5'-D(*CP*CP*CP*T)-3'), SODIUM ION 著者 Kang, C, Berger, I, Lockshin, C, Ratliff, R, Moyzis, R, Rich, A. 登録日 1994-09-29 公開日 1994-11-30 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystal structure of intercalated four-stranded d(C3T) at 1.4 angstroms resolution. Proc.Natl.Acad.Sci.USA, 91, 1994
5LJK	Crystal structure of human apo CRBP1 分子名称: Retinol-binding protein 1, SODIUM ION 著者 Zanotti, G, Vallese, F, Berni, R, Menozzi, I. 登録日 2016-07-18 公開日 2017-01-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural and molecular determinants affecting the interaction of retinol with human CRBP1. J. Struct. Biol., 197, 2017
5NA6	Structure of Cys-null Se-Met DPP III from Bacteroides thetaiotaomicron 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETATE ION, ... 著者 Sabljic, I, Luic, M. 登録日 2017-02-27 公開日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of dipeptidyl peptidase III from the human gut symbiont Bacteroides thetaiotaomicron. PLoS ONE, 12, 2017
3O8Q	1.45 Angstrom Resolution Crystal Structure of Shikimate 5-Dehydrogenase (aroE) from Vibrio cholerae 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SODIUM ION, SULFATE ION, ... 著者 Minasov, G, Light, S.H, Shuvalova, L, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2010-08-03 公開日 2010-08-18 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 1.45 Angstrom Resolution Crystal Structure of Shikimate 5-Dehydrogenase (aroE) from Vibrio cholerae. TO BE PUBLISHED
5NPM	CRYSTAL STRUCTURE OF MUTANT RIBOSOMAL PROTEIN TTHL1 LACKING 8 N-TERMINAL RESIDUES IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS 分子名称: 23S ribosomal RNA, 50S ribosomal protein L1, MALONATE ION, ... 著者 Gabdulkhakov, A.G, Tishchenko, T.V, Nevskaya, N.A, Nikonov, S.V, Garber, M.B. 登録日 2017-04-17 公開日 2018-05-16 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 [Influence of Nonconserved Regions of L1 Protuberance of Thermus thermophilus Ribosome on the Affinity of L1 Protein to 23s rRNA]. Mol.Biol.(Moscow), 52, 2018
5NII	Crystal structure of the atypical thioredoxin reductase TRi from Desulfovibrio vulgaris Hildenborough 分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Valette, O, Tran, T.T.I, Cavazza, C, Caudeville, E, Brasseur, G, Dolla, A, Talla, E, Pieulle, L. 登録日 2017-03-24 公開日 2017-12-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Biochemical Function, Molecular Structure and Evolution of an Atypical Thioredoxin Reductase from Desulfovibrio vulgaris. Front Microbiol, 8, 2017
5NIB	Ligand complex of RORg LBD 分子名称: DIMETHYL SULFOXIDE, Nuclear receptor ROR-gamma, SODIUM ION, ... 著者 Xue, Y, Aagaard, A, Narjes, F. 登録日 2017-03-23 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Potent and Orally Bioavailable Inverse Agonists of ROR gamma t Resulting from Structure-Based Design. J. Med. Chem., 61, 2018
5NQN	CU(I)-CSP3 (COPPER STORAGE PROTEIN 3) FROM METHYLOSINUS 分子名称: COPPER (I) ION, CSP3, SODIUM ION 著者 Basle, A, Platsaki, S, Dennison, C. 登録日 2017-04-20 公開日 2017-05-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Visualizing Biological Copper Storage: The Importance of Thiolate-Coordinated Tetranuclear Clusters. Angew. Chem. Int. Ed. Engl., 56, 2017
5NMN	Atomic resolution structure of LL-37 in a monomeric state 分子名称: Cathelicidin antimicrobial peptide, SODIUM ION 著者 Zeth, K, Sancho-Vaello, E. 登録日 2017-04-06 公開日 2018-01-24 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Structural remodeling and oligomerization of human cathelicidin on membranes suggest fibril-like structures as active species. Sci Rep, 7, 2017
6WEJ	Structure of cGMP-unbound WT TAX-4 reconstituted in lipid nanodiscs 分子名称: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cyclic nucleotide-gated cation channel, ... 著者 Zheng, X, Fu, Z, Su, D, Zhang, Y, Li, M, Pan, Y, Li, H, Li, S, Grassucci, R.A, Ren, Z, Hu, Z, Li, X, Zhou, M, Li, G, Frank, J, Yang, J. 登録日 2020-04-02 公開日 2020-06-03 最終更新日 2020-07-22 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Mechanism of ligand activation of a eukaryotic cyclic nucleotide-gated channel. Nat.Struct.Mol.Biol., 27, 2020
6TK1	Femtosecond to millisecond structural changes in a light-driven sodium pump: 20ms structure of KR2 with extrapolated, light and dark datasets 分子名称: EICOSANE, RETINAL, SODIUM ION, ... 著者 Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J. 登録日 2019-11-28 公開日 2020-05-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Femtosecond-to-millisecond structural changes in a light-driven sodium pump. Nature, 583, 2020
6THV	X-ray structure of the Danio rerio histone deacetylase 6 (HDAC6; catalytic domain 2) in complex with Tubastatin A 分子名称: 1,2-ETHANEDIOL, 4-[(2-methyl-3,4-dihydro-1~{H}-pyrido[4,3-b]indol-5-yl)methyl]-~{N}-oxidanyl-benzamide, DI(HYDROXYETHYL)ETHER, ... 著者 Barinka, C, Motlova, L, Svoboda, M. 登録日 2019-11-21 公開日 2020-07-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Structural and in Vivo Characterization of Tubastatin A, a Widely Used Histone Deacetylase 6 Inhibitor. Acs Med.Chem.Lett., 11, 2020

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