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6NJO
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Structure of the assembled ATPase EscN from the enteropathogenic E. coli (EPEC) type III secretion system
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
著者Majewski, D.D, Worrall, L.J, Hong, C, Atkinson, C.E, Vuckovic, M, Watanabe, N, Yu, Z, Strynadka, N.C.J.
登録日2019-01-03
公開日2019-02-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Cryo-EM structure of the homohexameric T3SS ATPase-central stalk complex reveals rotary ATPase-like asymmetry.
Nat Commun, 10, 2019
4WQ5
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YgjD(V85E)-YeaZ heterodimer in complex with ATP
分子名称: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, FE (III) ION, ...
著者Zhang, W.
登録日2014-10-21
公開日2015-01-28
最終更新日2015-02-25
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献The ATP-mediated formation of the YgjD-YeaZ-YjeE complex is required for the biosynthesis of tRNA t6A in Escherichia coli.
Nucleic Acids Res., 43, 2015
4WQ4
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E. coli YgjD(E12A)-YeaZ heterodimer in complex with ATP
分子名称: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Zhang, W, Collinet, B.
登録日2014-10-21
公開日2015-01-28
最終更新日2015-02-25
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献The ATP-mediated formation of the YgjD-YeaZ-YjeE complex is required for the biosynthesis of tRNA t6A in Escherichia coli.
Nucleic Acids Res., 43, 2015
7UZF
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BU of 7uzf by Molmil
Rat Kidney V-ATPase with SidK, State 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Rubinstein, J.L, Abbas, Y.M.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7UZI
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Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Rubinstein, J.L, Abbas, Y.M.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7UZH
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Rat Kidney V-ATPase with SidK, State 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Rubinstein, J.L, Abbas, Y.M.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7UZG
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Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Rubinstein, J.L, Abbas, Y.M.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7Z15
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E. coli C-P lyase bound to a PhnK/PhnL dual ABC dimer and ADP + Pi
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, ...
著者Amstrup, S.K, Sofos, N, Karlsen, J.L, Skjerning, R.B, Boesen, T, Enghild, J.J, Hove-Jensen, B, Brodersen, D.E.
登録日2022-02-24
公開日2022-06-22
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (1.93 Å)
主引用文献Structural remodelling of the carbon-phosphorus lyase machinery by a dual ABC ATPase.
Nat Commun, 14, 2023
1O9T
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Methionine adenosyltransferase complexed with both substrates ATP and methionine
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, METHIONINE, ...
著者Gonzalez, B, Pajares, M.A, Hermoso, J.A, Sanz-Aparicio, J.
登録日2002-12-18
公開日2003-08-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structures of Methionine Adenosyltransferase Complexed with Substrates and Products Reveal the Methionine-ATP Recognition and Give Insights Into the Catalytic Mechanism
J.Mol.Biol., 331, 2003
2IWY
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BU of 2iwy by Molmil
Human mitochondrial beta-ketoacyl ACP synthase
分子名称: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE, AMMONIUM ION
著者Christensen, C.E, Kragelund, B.B, von Wettstein-Knowles, P, Henriksen, A.
登録日2006-07-05
公開日2007-02-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structure of the Human Beta-Ketoacyl [Acp] Synthase from the Mitochondrial Type II Fatty Acid Synthase.
Protein Sci., 16, 2007
7COQ
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BU of 7coq by Molmil
Hexameric Ring Complex of Engineered V1-ATPase bound to AMP-PNP: A3(De)3_(ANP)1cat
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, V-type sodium ATPase catalytic subunit A, ...
著者Kosugi, T, Tanabe, M, Koga, N.
登録日2020-08-05
公開日2021-08-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.44 Å)
主引用文献De Novo Design of Allosteric Control into Rotary Motor V1-ATPase by Restoring Lost Function
To Be Published
1J3N
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BU of 1j3n by Molmil
Crystal Structure of 3-oxoacyl-(acyl-carrier protein) Synthase II from Thermus thermophilus HB8
分子名称: 3-oxoacyl-(acyl-carrier protein) synthase II, CITRIC ACID, MAGNESIUM ION
著者Bagautdinov, B, Miyano, M, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-02-10
公開日2003-03-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of 3-oxoacyl-(acyl-carrier protein) synthase II from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 64, 2008
6UUZ
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Structure of ACLY in the presence of citrate and CoA
分子名称: ATP-citrate synthase, COENZYME A
著者Xuepeng, W, Ronen, M.
登録日2019-11-01
公開日2020-01-01
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
7DQE
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BU of 7dqe by Molmil
Crystal structure of the ADP-bound mutant A(S23C)3B(N64C)3 complex from enterococcus hirae V-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SULFATE ION, ...
著者Maruyama, S, Nakamoto, K, Suzuki, K, Mizutani, K, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Murata, T.
登録日2020-12-23
公開日2021-12-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.694 Å)
主引用文献The Combination of High-Speed AFM and X-ray Crystallography Reveals Rotary Catalytic Mechanism of Shaftless V1-ATPase
To Be Published
7DQC
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BU of 7dqc by Molmil
Crystal structure of nucleotide-free mutant A(S23C)3B(N64C)3 complex from Enterococcus hirae V-ATPase
分子名称: GLYCEROL, V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
著者Maruyama, S, Suzuki, K, Mizutani, K, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Murata, M.
登録日2020-12-23
公開日2021-12-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.706 Å)
主引用文献The combination of high-speed AFM and X-ray crystallography reveals rotary catalytic mechanism of shaftless V1-ATPase
To Be Published
6POE
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BU of 6poe by Molmil
Structure of ACLY in complex with CoA
分子名称: ATP-citrate synthase, COENZYME A
著者Wei, X, Marmorstein, R.
登録日2019-07-03
公開日2019-12-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
7DPT
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BU of 7dpt by Molmil
Structural basis for ligand binding modes of CTP synthase
分子名称: 6-DIAZENYL-5-OXO-L-NORLEUCINE, ADENOSINE-5'-DIPHOSPHATE, CTP synthase, ...
著者Liu, J.L, Zhou, X, Guo, C.J, Chang, C.C.
登録日2020-12-21
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献Structural basis for ligand binding modes of CTP synthase.
Proc.Natl.Acad.Sci.USA, 118, 2021
7TMM
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BU of 7tmm by Molmil
Complete V1 Complex from Saccharomyces cerevisiae
分子名称: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ...
著者Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L.
登録日2022-01-19
公開日2022-04-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation.
Nat.Struct.Mol.Biol., 29, 2022
7FHA
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BU of 7fha by Molmil
Crystal structure of the ATP sulfurylase domain of human PAPSS2 in complex with APS
分子名称: ADENOSINE-5'-PHOSPHOSULFATE, Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2, POTASSIUM ION, ...
著者Zhang, P, Zhang, L, Zhang, L.
登録日2021-07-29
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the substrate recognition mechanism of ATP-sulfurylase domain of human PAPS synthase 2.
Biochem.Biophys.Res.Commun., 586, 2022
7FH3
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BU of 7fh3 by Molmil
Crystal structure of the ATP sulfurylase domain of human PAPSS2
分子名称: Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2, SULFATE ION, beta-D-glucopyranose
著者Zhang, P, Zhang, L, Zhang, L.
登録日2021-07-29
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the substrate recognition mechanism of ATP-sulfurylase domain of human PAPS synthase 2.
Biochem.Biophys.Res.Commun., 586, 2022
6N6Z
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BU of 6n6z by Molmil
Crystal Structure of ATPase delta 1-79 Spa47 R189E
分子名称: Probable ATP synthase SpaL/MxiB
著者Morales, Y, Johnson, S.J, Demler, H.J, Dickenson, N.E.
登録日2018-11-27
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献Interfacial amino acids support Spa47 oligomerization and shigella type three secretion system activation.
Proteins, 87, 2019
6N71
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Crystal Structure of ATPase delta1-79 Spa47 R191E
分子名称: Probable ATP synthase SpaL/MxiB
著者Morales, Y, Olsen, K.J, Johnson, S.J, Demler, H.J, Dickenson, N.E.
登録日2018-11-27
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Interfacial amino acids support Spa47 oligomerization and shigella type three secretion system activation.
Proteins, 87, 2019
7TMP
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BU of 7tmp by Molmil
V1 complex lacking subunit C from Saccharomyces cerevisiae, State 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, MAGNESIUM ION, ...
著者Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L.
登録日2022-01-19
公開日2022-04-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation.
Nat.Struct.Mol.Biol., 29, 2022
7TMQ
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V1 complex lacking subunit C from Saccharomyces cerevisiae, State 3
分子名称: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, MAGNESIUM ION, ...
著者Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L.
登録日2022-01-19
公開日2022-04-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation.
Nat.Struct.Mol.Biol., 29, 2022
7DPW
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BU of 7dpw by Molmil
Structural basis for ligand binding modes of CTP synthase
分子名称: CTP synthase, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION
著者Liu, J.L, Zhou, X, Guo, C.J, Chang, C.C.
登録日2020-12-21
公開日2021-09-15
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.65 Å)
主引用文献Structural basis for ligand binding modes of CTP synthase.
Proc.Natl.Acad.Sci.USA, 118, 2021

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