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2KG1
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Structure of the third qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA
分子名称: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F
著者Allain, F.H.T, Dominguez, C.
登録日2009-03-02
公開日2010-06-09
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs.
Nat.Struct.Mol.Biol., 17, 2010
2KG0
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BU of 2kg0 by Molmil
Structure of the second qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA
分子名称: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F
著者Allain, F.H.T, Dominguez, C.
登録日2009-03-02
公開日2010-06-09
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs.
Nat.Struct.Mol.Biol., 17, 2010
3MDF
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BU of 3mdf by Molmil
Crystal structure of the RRM domain of Cyclophilin 33
分子名称: Peptidyl-prolyl cis-trans isomerase E
著者Hom, R.A, Chang, P.Y, Roy, S, Mussleman, C.A, Glass, K.C, Seleznevia, A.I, Gozani, O, Ismagilov, R.F, Cleary, M.L, Kutateladze, T.G.
登録日2010-03-30
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular mechanism of MLL PHD3 and RNA recognition by the Cyp33 RRM domain.
J.Mol.Biol., 400, 2010
2XB2
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BU of 2xb2 by Molmil
Crystal structure of the core Mago-Y14-eIF4AIII-Barentsz-UPF3b assembly shows how the EJC is bridged to the NMD machinery
分子名称: EUKARYOTIC INITIATION FACTOR 4A-III, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Buchwald, G, Ebert, J, Basquin, C, Sauliere, J, Jayachandran, U, Bono, F, Le Hir, H, Conti, E.
登録日2010-04-03
公開日2010-05-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Insights Into the Recruitment of the Nmd Machinery from the Crystal Structure of a Core Ejc-Upf3B Complex.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MD3
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BU of 3md3 by Molmil
Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
分子名称: GLYCEROL, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, SULFATE ION
著者Li, H, Shi, H, Zhu, Z, Wang, H, Niu, L, Teng, M.
登録日2010-03-29
公開日2010-05-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
To be published
3MD1
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Crystal Structure of the Second RRM Domain of Yeast Poly(U)-Binding Protein (Pub1)
分子名称: GLYCEROL, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
著者Li, H, Shi, H, Li, Y, Cui, Y, Niu, L, Teng, M.
登録日2010-03-29
公開日2010-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of the Second RRM Domain of Yeast Poly(U)-Binding Protein (Pub1)
To be published
2KRR
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BU of 2krr by Molmil
Solution structure of the RBD1,2 domains from human nucleolin
分子名称: Nucleolin
著者Arumugam, N, Miller, C, Maliekal, J, Bates, P.J, Trent, J.O, Lane, A.N.
登録日2009-12-22
公開日2010-05-05
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution structure of the RBD1,2 domains from human nucleolin.
J.Biomol.Nmr, 47, 2010
3HI9
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BU of 3hi9 by Molmil
The x-ray crystal structure of the first RNA recognition motif (RRM1) of the AU-rich element (ARE) binding protein HuR at 2.0 angstrom resolution
分子名称: ELAV-like protein 1
著者Benoit, R.M, Kallen, J.
登録日2009-05-19
公開日2010-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The X-ray Crystal Structure of the First RNA Recognition Motif and Site-Directed Mutagenesis Suggest a Possible HuR Redox Sensing Mechanism.
J.Mol.Biol., 397, 2010
3IIN
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BU of 3iin by Molmil
Plasticity of the kink turn structural motif
分子名称: DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)-R(P*CP*GP*GP*CP*C)-3'), DNA/RNA (5'-R(*CP*A)-D(P*T)-3'), Group I intron, ...
著者Lipchock, S.V, Strobel, S.A, Antonioli, A.H, Cochrane, J.C.
登録日2009-08-02
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (4.18 Å)
主引用文献Plasticity of the RNA kink turn structural motif.
Rna, 16, 2010
2KH9
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BU of 2kh9 by Molmil
Solution structure of yeast Prp24-RRM2 bound to a fragment of U6 RNA
分子名称: 5'-R(*AP*GP*AP*GP*AP*U)-3', U4/U6 snRNA-associated-splicing factor PRP24
著者Martin-Tumasz, S.A, Butcher, S.E.
登録日2009-03-27
公開日2010-03-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure and functional implications of a complex containing a segment of U6 RNA bound by a domain of Prp24.
Rna, 16, 2010
2X1G
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BU of 2x1g by Molmil
Crystal structure of Importin13 - Mago-Y14 complex
分子名称: CADMUS, PROTEIN MAGO NASHI, RNA-BINDING PROTEIN 8A
著者Bono, F, Cook, A.G, Gruenwald, M, Ebert, J, Conti, E.
登録日2009-12-23
公開日2010-02-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Nuclear Import Mechanism of the Ejc Component Mago- Y14 Revealed by Structural Studies of Importin 13.
Mol.Cell, 37, 2010
2X1A
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BU of 2x1a by Molmil
Structure of Rna15 RRM with RNA bound (G)
分子名称: 5'-R(*GP*UP*UP*GP*UP)-3', MAGNESIUM ION, MRNA 3'-END-PROCESSING PROTEIN RNA15
著者Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
登録日2010-01-06
公開日2010-02-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010
2X1B
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BU of 2x1b by Molmil
Structure of RNA15 RRM
分子名称: MRNA 3'-END-PROCESSING PROTEIN RNA15, PHOSPHATE ION
著者Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
登録日2010-01-06
公開日2010-02-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010
2X1F
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BU of 2x1f by Molmil
Structure of Rna15 RRM with bound RNA (GU)
分子名称: 5'-R(*GP*UP*UP*GP*UP)-3', MRNA 3'-END-PROCESSING PROTEIN RNA15
著者Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
登録日2010-01-06
公開日2010-02-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010
2KRB
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BU of 2krb by Molmil
Solution structure of EIF3B-RRM bound to EIF3J peptide
分子名称: Eukaryotic translation initiation factor 3 subunit B, Eukaryotic translation initiation factor 3 subunit J
著者Elantak, L, Wagner, S, Herrmannova, A, Janoskova, M, Rutkai, E, Lukavsky, P.J, Valasek, L.
登録日2009-12-16
公開日2010-01-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The indispensable N-terminal half of eIF3j/HCR1 co-operates with its structurally conserved binding partner eIF3b/PRT1-RRM and eIF1A in stringent AUG selection
To be Published
3L3C
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BU of 3l3c by Molmil
Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6P
分子名称: 6-O-phosphono-alpha-D-glucopyranose, GLMS RIBOZYME, MAGNESIUM ION, ...
著者Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D.
登録日2009-12-16
公開日2009-12-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
3K0J
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Crystal structure of the E. coli ThiM riboswitch in complex with thiamine pyrophosphate and the U1A crystallization module
分子名称: MAGNESIUM ION, RNA (87-MER), THIAMINE DIPHOSPHATE, ...
著者Kulshina, N, Edwards, T.E, Ferre-D'Amare, A.R.
登録日2009-09-24
公開日2009-12-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Thermodynamic analysis of ligand binding and ligand binding-induced tertiary structure formation by the thiamine pyrophosphate riboswitch.
Rna, 16, 2010
2KHC
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BU of 2khc by Molmil
Bruno RRM3+
分子名称: Testis-specific RNP-type RNA binding protein
著者Lyon, A.M, Reveal, B.S, Macdonald, P.M, Hoffman, D.W.
登録日2009-04-01
公開日2009-12-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Bruno protein contains an expanded RNA recognition motif.
Biochemistry, 48, 2009
3HHN
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BU of 3hhn by Molmil
Crystal structure of class I ligase ribozyme self-ligation product, in complex with U1A RBD
分子名称: Class I ligase ribozyme, self-ligation product, MAGNESIUM ION, ...
著者Shechner, D.M, Grant, R.A, Bagby, S.C, Bartel, D.P.
登録日2009-05-15
公開日2009-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.987 Å)
主引用文献Crystal structure of the catalytic core of an RNA-polymerase ribozyme.
Science, 326, 2009
3IRW
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BU of 3irw by Molmil
Structure of a c-di-GMP riboswitch from V. cholerae
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ...
著者Smith, K.D.
登録日2009-08-24
公開日2009-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of ligand binding by a c-di-GMP riboswitch.
Nat.Struct.Mol.Biol., 16, 2009
3IWN
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Co-crystal structure of a bacterial c-di-GMP riboswitch
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), C-di-GMP riboswitch, U1 small nuclear ribonucleoprotein A
著者Kulshina, N, Baird, N.J, Ferre-D'Amare, A.R.
登録日2009-09-02
公開日2009-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch.
Nat.Struct.Mol.Biol., 16, 2009
3G8S
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BU of 3g8s by Molmil
Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozyme
分子名称: GLMS RIBOZYME, MAGNESIUM ION, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), ...
著者Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D.
登録日2009-02-12
公開日2009-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
3G8T
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Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6P
分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), ...
著者Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D.
登録日2009-02-12
公開日2009-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
3G9C
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Crystal structure of the product Bacillus anthracis glmS ribozyme
分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, GLMS RIBOZYME, MAGNESIUM ION, ...
著者Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D.
登録日2009-02-13
公開日2009-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
3G96
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Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6P
分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, GLMS RIBOZYME, MAGNESIUM ION, ...
著者Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D.
登録日2009-02-12
公開日2009-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009

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