PDB: 35140 件ウェブページステータス検索Chemie searchBIRD

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7P7S	PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II 分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ... 著者 Crowe-McAuliffe, C, Wilson, D.N. 登録日 2021-07-20 公開日 2022-02-23 最終更新日 2022-04-20 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics. Nat Commun, 13, 2022
7P7U	E. faecalis 70S ribosome with P-tRNA, state IV 分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ... 著者 Crowe-McAuliffe, C, Wilson, D.N. 登録日 2021-07-20 公開日 2022-02-23 最終更新日 2022-04-20 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics. Nat Commun, 13, 2022
7P7Q	E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume 分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ... 著者 Crowe-McAuliffe, C, Wilson, D.N. 登録日 2021-07-20 公開日 2022-02-23 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics. Nat Commun, 13, 2022
7P7R	PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I 分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ... 著者 Crowe-McAuliffe, C, Wilson, D.N. 登録日 2021-07-20 公開日 2022-03-23 最終更新日 2022-04-20 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics. Nat Commun, 13, 2022
7Q37	Crystal structure of proton pump MAR rhodopsin pressurized with krypton 分子名称: Bacteriorhodopsin, EICOSANE, HEXANE, ... 著者 Melnikov, I, Rulev, M, Astashkin, R, Kovalev, K, Carpentier, P, Gordeliy, V, Popov, A. 登録日 2021-10-27 公開日 2022-04-27 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 High-pressure crystallography shows noble gas intervention into protein-lipid interaction and suggests a model for anaesthetic action. Commun Biol, 5, 2022
5O0S	Crystal structure of txGH116 (beta-glucosidase from Thermoanaerobacterium xylolyticum) in complex with unreacted beta Cyclophellitol Cyclosulfate probe ME711 分子名称: (3~{a}~{S},4~{R},5~{S},6~{R},7~{R},7~{a}~{R})-7-(hydroxymethyl)-2,2-bis(oxidanylidene)-3~{a},4,5,6,7,7~{a}-hexahydrobenzo[d][1,3,2]dioxathiole-4,5,6-triol, 1,2-ETHANEDIOL, CALCIUM ION, ... 著者 Wu, L, Offen, W.A, Breen, I.Z, Davies, G.J. 登録日 2017-05-16 公開日 2017-08-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 1,6-Cyclophellitol Cyclosulfates: A New Class of Irreversible Glycosidase Inhibitor. ACS Cent Sci, 3, 2017
5OLE	X-ray structure of the adduct formed upon reaction of hen egg white lysozyme with a tetranuclear Pt-thiosemicarbazone compound 分子名称: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, Lysozyme C, ... 著者 Ferraro, G, Merlino, A. 登録日 2017-07-27 公開日 2018-08-29 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Reactions of a tetranuclear Pt-thiosemicarbazone complex with model proteins. J. Inorg. Biochem., 181, 2018
5O4W	Protein structure determination by electron diffraction using a single three-dimensional nanocrystal 分子名称: Lysozyme C 著者 Clabbers, M.T.B, van Genderen, E, Wan, W, Wiegers, E.L, Gruene, T, Abrahams, J.P. 登録日 2017-05-31 公開日 2017-08-23 最終更新日 2024-01-17 実験手法 ELECTRON CRYSTALLOGRAPHY (2.11 Å) 主引用文献 Protein structure determination by electron diffraction using a single three-dimensional nanocrystal. Acta Crystallogr D Struct Biol, 73, 2017
5O4X	Protein structure determination by electron diffraction using a single three-dimensional nanocrystal 分子名称: Lysozyme C 著者 Clabbers, M.T.B, van Genderen, E, Wan, W, Wiegers, E.L, Gruene, T, Abrahams, J.P. 登録日 2017-05-31 公開日 2017-08-23 最終更新日 2024-01-17 実験手法 ELECTRON CRYSTALLOGRAPHY (2.11 Å) 主引用文献 Protein structure determination by electron diffraction using a single three-dimensional nanocrystal. Acta Crystallogr D Struct Biol, 73, 2017
5NPF	Crystal structure of txGH116 (beta-glucosidase from Thermoanaerobacterium xylolyticum) in complex with beta Cyclophellitol Cyclosulfate probe ME594 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glucosylceramidase, ... 著者 Wu, L, Offen, W.A, Breen, I.Z, Davies, G.J. 登録日 2017-04-16 公開日 2017-08-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 1,6-Cyclophellitol Cyclosulfates: A New Class of Irreversible Glycosidase Inhibitor. ACS Cent Sci, 3, 2017
7O6N	Crystal structure of C. elegans ERH-2 PID-3 complex 分子名称: Enhancer of rudimentary homolog 2, FORMIC ACID, Protein pid-3 著者 Falk, S, Ketting, R.F. 登録日 2021-04-11 公開日 2021-08-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Structural basis of PETISCO complex assembly during piRNA biogenesis in C. elegans . Genes Dev., 35, 2021
7OCX	Crystal Structure of the PID-3 TOFU-6 RRM domain complex 分子名称: Embryonic developmental protein tofu-6, Protein pid-3 著者 Basquin, J, Ketting, R.F, Falk, S. 登録日 2021-04-28 公開日 2021-08-25 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis of PETISCO complex assembly during piRNA biogenesis in C. elegans . Genes Dev., 35, 2021
7OCZ	Crystal Structure of the PID-3 RRM domain 分子名称: CHLORIDE ION, Protein pid-3 著者 Basquin, J, Ketting, R.F, Falk, S. 登録日 2021-04-28 公開日 2021-08-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Structural basis of PETISCO complex assembly during piRNA biogenesis in C. elegans . Genes Dev., 35, 2021
7O6L	Crystal structure of C. elegans ERH-2 分子名称: Enhancer of rudimentary homolog 2 著者 Falk, S, Ketting, R.F. 登録日 2021-04-11 公開日 2021-08-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural basis of PETISCO complex assembly during piRNA biogenesis in C. elegans . Genes Dev., 35, 2021
7O7K	Crystal structure of the human DYRK1A kinase domain bound to abemaciclib 分子名称: 1,2-ETHANEDIOL, CITRATE ANION, DI(HYDROXYETHYL)ETHER, ... 著者 Kaltheuner, I.H, Anand, K, Geyer, M. 登録日 2021-04-13 公開日 2021-11-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Abemaciclib is a potent inhibitor of DYRK1A and HIP kinases involved in transcriptional regulation. Nat Commun, 12, 2021
4H4A	Crystal structure of the C-terminal domain of Drosophila melanogaster Zucchini 分子名称: Mitochondrial cardiolipin hydrolase 著者 Voigt, F, Schulz, E.C, Barabas, O. 登録日 2012-09-17 公開日 2012-11-07 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of the primary piRNA biogenesis factor Zucchini reveals similarity to the bacterial PLD endonuclease Nuc. Rna, 18, 2012
8EUA	Structure of SARS-CoV2 PLpro bound to a covalent inhibitor 分子名称: Papain-like protease nsp3, SULFATE ION, ZINC ION, ... 著者 Mathews, I.I, Pokhrel, S, Wakatsuki, S. 登録日 2022-10-18 公開日 2023-04-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Potent and selective covalent inhibition of the papain-like protease from SARS-CoV-2. Nat Commun, 14, 2023
5XYW	Crystal structure of drosophila simulans Rhino chromoshadow domain in complex with N-terminal domain 分子名称: GD21652, Rhino 著者 Yu, B.W, Huang, Y. 登録日 2017-07-10 公開日 2018-06-20 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.705 Å) 主引用文献 Structural insights into Rhino-Deadlock complex for germline piRNA cluster specification EMBO Rep., 19, 2018
5FIQ	Exonuclease domain-containing 1 (Exd1) in the native conformation 分子名称: EXD1 著者 Yang, Z, Chen, K.M, Pandey, R.R, Homolka, D, Reuter, M, Rodino Janeiro, B.K, Sachidanandam, R, Fauvarque, M.O, McCarthy, A.A, Pillai, R.S. 登録日 2015-10-01 公開日 2015-12-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Piwi Slicing and Exd1 Drive Biogenesis of Nuclear Pirnas from Cytosolic Targets of the Mouse Pirna Pathway Mol.Cell, 61, 2016
5XYV	Crystal structure of drosophila melanogaster Rhino chromoshadow domain in complex with Deadlock N-terminal domain 分子名称: Protein deadlock, RHINO 著者 Yu, B.W, Huang, Y. 登録日 2017-07-10 公開日 2018-06-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural insights into Rhino-Deadlock complex for germline piRNA cluster specification EMBO Rep., 19, 2018
5FIS	Exonuclease domain-containing 1 (Exd1) in the Gd bound conformation 分子名称: EXD1, GADOLINIUM ATOM 著者 Yang, Z, Chen, K.M, Pandey, R.R, Homolka, D, Reuter, M, Rodino Janeiro, B.K, Sachidanandam, R, Fauvarque, M.O, McCarthy, A.A, Pillai, R.S. 登録日 2015-10-02 公開日 2015-12-23 最終更新日 2016-01-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Piwi Slicing and Exd1 Drive Biogenesis of Nuclear Pirnas from Cytosolic Targets of the Mouse Pirna Pathway Mol.Cell, 61, 2016
8DL9	Room temperature X-ray structure of SARS-CoV-2 main protease in complex with compound Z199538122 分子名称: 1-{4-[(naphthalen-1-yl)methyl]piperazin-1-yl}ethan-1-one, 3C-like proteinase 著者 Kovalevsky, A.Y, Coates, L, Kneller, D.W. 登録日 2022-07-07 公開日 2023-05-17 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 AI-Accelerated Design of Targeted Covalent Inhibitors for SARS-CoV-2. J.Chem.Inf.Model., 63, 2023
8DLB	Room temperature X-ray structure of SARS-CoV-2 main protease in complex with compound Z2799209083 分子名称: 1-[(5S)-5-(3,4-dimethoxyphenyl)-3-phenyl-4,5-dihydro-1H-pyrazol-1-yl]ethan-1-one, 3C-like proteinase 著者 Kovalevsky, A.Y, Coates, L, Kneller, D.W. 登録日 2022-07-07 公開日 2023-05-17 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 AI-Accelerated Design of Targeted Covalent Inhibitors for SARS-CoV-2. J.Chem.Inf.Model., 63, 2023
8DMD	Room temperature X-ray structure of SARS-CoV-2 main protease in complex with compound ZZ4461624291 分子名称: 1-[(3R)-4-[(3-chlorophenyl)methyl]-3-(2-methylpropyl)piperazin-1-yl]ethan-1-one, 3C-like proteinase 著者 Kovalevsky, A, Coates, L, Kneller, D.W. 登録日 2022-07-08 公開日 2023-05-17 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 AI-Accelerated Design of Targeted Covalent Inhibitors for SARS-CoV-2. J.Chem.Inf.Model., 63, 2023
6AKL	Crystal structure of Striatin3 in complex with SIKE1 Coiled-coil domain 分子名称: Striatin-3, Suppressor of IKBKE 1 著者 Zhou, L, Chen, M, Zhou, Z.C. 登録日 2018-09-02 公開日 2019-01-16 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Architecture, substructures, and dynamic assembly of STRIPAK complexes in Hippo signaling. Cell Discov, 5, 2019

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