Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4ROB
DownloadVisualize
BU of 4rob by Molmil
2.8A resolution structure of SRPN2 (K198C) from Anopheles gambiae
分子名称: Serpin 2
著者Lovell, S, Battaile, K.P, Zhang, X, Meekins, D.A, An, C, Michel, K.
登録日2014-10-28
公開日2014-12-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献2.8A resolution structure of SRPN2 (K198C) from Anopheles gambiae
To be Published
2QEV
DownloadVisualize
BU of 2qev by Molmil
Crystal Structure of Anopheles gambiae D7r4
分子名称: D7R4 Protein
著者Andersen, J.F, Mans, B.J, Calvo, E, Ribeiro, J.M.
登録日2007-06-26
公開日2007-10-09
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献The Crystal Structure of D7r4, a Salivary Biogenic Amine-binding Protein from the Malaria Mosquito Anopheles gambiae
J.Biol.Chem., 282, 2007
7Q20
DownloadVisualize
BU of 7q20 by Molmil
Ruminococcus gnavus ATC29149 endo-beta-1,4-galactosidase (RgGH98) in complex with blood group A trisaccharide
分子名称: CALCIUM ION, MAGNESIUM ION, Ruminococcus gnavus endogalactosidase GH98, ...
著者Owen, C.D, Wu, H, Crost, E.H, van Bakel, W, Gascuena, A.M, Latousakis, D, Hicks, T, Walpole, S, Urbanowicz, P.A, Ndeh, D, Monaco, S, Salom, L.S, Griffiths, R, Colvile, A, Spencer, D.I.R, Walsh, M.A, Angulo, J, Juge, N.
登録日2021-10-22
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The human gut symbiont Ruminococcus gnavus shows specificity to blood group A antigen during mucin glycan foraging: Implication for niche colonisation in the gastrointestinal tract.
Plos Biol., 19, 2021
7PMO
DownloadVisualize
BU of 7pmo by Molmil
Ruminococcus gnavus ATC29149 endo-beta-1,4-galactosidase (RgGH98)
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Owen, C.D, Wu, H, Crost, E.H, van Bakel, W, Gascuena, A.M, Latousakis, D, Hicks, T, Walpole, S, Urbanowicz, P.A, Ndeh, D, Monaco, S, Salom, L.S, Griffiths, R, Colvile, A, Spencer, D.I.R, Walsh, M.A, Angulo, J, Juge, N.
登録日2021-09-02
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The human gut symbiont Ruminococcus gnavus shows specificity to blood group A antigen during mucin glycan foraging: Implication for niche colonisation in the gastrointestinal tract.
Plos Biol., 19, 2021
5EL2
DownloadVisualize
BU of 5el2 by Molmil
Crystal structure of Odorant Binding Protein 1 from Anopheles gambiae (AgamOBP1) with Icaridin (butan-2-yl 2-(2-hydroxyethyl)piperidine-1-carboxylate)
分子名称: AGAP003309-PA, Icaridin, MAGNESIUM ION
著者Drakou, C.E, Tsitsanou, K.E, Zographos, S.E.
登録日2015-11-04
公開日2016-08-31
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The crystal structure of the AgamOBP1Icaridin complex reveals alternative binding modes and stereo-selective repellent recognition.
Cell. Mol. Life Sci., 74, 2017
3E2B
DownloadVisualize
BU of 3e2b by Molmil
Crystal structure of Dynein Light chain LC8 in complex with a peptide derived from Swallow
分子名称: ACETATE ION, Dynein light chain 1, cytoplasmic, ...
著者Benison, G, Barbar, E, Karplus, P.A.
登録日2008-08-05
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The interplay of ligand binding and quaternary structure in the diverse interactions of dynein light chain LC8.
J.Mol.Biol., 384, 2008
3FSC
DownloadVisualize
BU of 3fsc by Molmil
Crystal structure of QdtC, the dTDP-3-amino-3,6-dideoxy-D-glucose N-acetyl transferase from Thermoanaerobacterium thermosaccharolyticum in complex with CoA and dTDP-3-amino-fucose
分子名称: (3R,4S,5R,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate, COENZYME A, QdtC
著者Holden, H.M, Thoden, J.B.
登録日2009-01-09
公開日2009-02-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Functional Studies of QdtC: an N-Acetyltransferase Required for the Biosynthesis of dTDP-3-Acetamido-3,6-Dideoxy-alpha-D-Glucose.
Biochemistry, 48, 2009
3FUS
DownloadVisualize
BU of 3fus by Molmil
Improved Structure of the Unliganded Simian Immunodeficiency Virus gp120 Core
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, X, Poon, B, Wang, Q, Ma, J.
登録日2009-01-14
公開日2009-06-30
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural improvement of unliganded simian immunodeficiency virus gp120 core by normal-mode-based X-ray crystallographic refinement.
Acta Crystallogr.,Sect.D, 65, 2009
5GAJ
DownloadVisualize
BU of 5gaj by Molmil
Solution NMR structure of De novo designed PLOOP2X3_50 fold protein, Northeast Structural Genomics Consortium (NESG) target OR258
分子名称: DE NOVO DESIGNED PROTEIN OR258
著者Liu, G, Castelllanos, J, Koga, R, Koga, N, Xiao, R, Pederson, K, Janjua, H, Kohan, E, Acton, T.B, Kornhaber, G, Everett, J, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2015-12-01
公開日2016-01-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR structure De novo designed PLOOP2X3_50 fold protein, Northeast Structural Genomics Consortium (NESG) target OR258
To Be Published
3GAL
DownloadVisualize
BU of 3gal by Molmil
CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSAMINE
分子名称: 2-amino-2-deoxy-beta-D-galactopyranose, GALECTIN-7
著者Leonidas, D.D, Acharya, K.R.
登録日1998-07-13
公開日1998-11-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the recognition of carbohydrates by human galectin-7.
Biochemistry, 37, 1998
9ANT
DownloadVisualize
BU of 9ant by Molmil
ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
分子名称: ANTENNAPEDIA HOMEODOMAIN, DNA (5'-D(*AP*GP*AP*AP*AP*GP*CP*CP*AP*TP*TP*AP*GP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*CP*TP*AP*AP*TP*GP*GP*CP*TP*TP*TP*C)-3'), ...
著者Fraenkel, E, Pabo, C.O.
登録日1998-07-02
公開日1998-10-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Comparison of X-ray and NMR structures for the Antennapedia homeodomain-DNA complex.
Nat.Struct.Biol., 5, 1998
3F6U
DownloadVisualize
BU of 3f6u by Molmil
Crystal structure of human Activated Protein C (APC) complexed with PPACK
分子名称: CALCIUM ION, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, SODIUM ION, ...
著者Schmidt, A.E, Padmanabhan, K, Underwood, M.C, Bode, W, Mather, T, Bajaj, S.P.
登録日2008-11-06
公開日2008-11-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Thermodynamic linkage between the S1 site, the Na+ site, and the Ca2+ site in the protease domain of human activated protein C (APC).
J.Biol.Chem., 277, 2002
3DGH
DownloadVisualize
BU of 3dgh by Molmil
Crystal Structure of Drosophila Thioredoxin Reductase, C-terminal 8-residue truncation
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, Thioredoxin reductase 1, ...
著者Eckenroth, B.E, Hondal, R.J, Everse, S.J.
登録日2008-06-13
公開日2009-06-16
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.745 Å)
主引用文献Crystal Structure of Drosophila Thioredoxin Reductase, C-terminal 8-residue truncation
To be Published
3HDD
DownloadVisualize
BU of 3hdd by Molmil
ENGRAILED HOMEODOMAIN DNA COMPLEX
分子名称: 5'-D(*AP*TP*TP*AP*GP*GP*TP*AP*AP*TP*TP*AP*CP*AP*TP*GP*GP*CP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*TP*AP*CP*CP*TP*AP*A)-3', ENGRAILED HOMEODOMAIN
著者Fraenkel, E, Rould, M.A, Chambers, K.A, Pabo, C.O.
登録日1998-07-13
公開日1998-11-11
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Engrailed homeodomain-DNA complex at 2.2 A resolution: a detailed view of the interface and comparison with other engrailed structures.
J.Mol.Biol., 284, 1998
5HNX
DownloadVisualize
BU of 5hnx by Molmil
Structural basis of backwards motion in kinesin-14: minus-end directed nKn664 in the nucleotide-free state
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Shigematsu, H, Yokoyama, T, Kikkawa, M, Shirouzu, M, Nitta, R.
登録日2016-01-19
公開日2016-08-10
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Structural Basis of Backwards Motion in Kinesin-1-Kinesin-14 Chimera: Implication for Kinesin-14 Motility
Structure, 24, 2016
6EHC
DownloadVisualize
BU of 6ehc by Molmil
OmpUdeltaN (N-terminus deletion mutant of OmpU), outer membrane protein of Vibrio cholerae
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein U
著者van den berg, B, Pathania, M.
登録日2017-09-13
公開日2018-04-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Unusual Constriction Zones in the Major Porins OmpU and OmpT from Vibrio cholerae.
Structure, 26, 2018
5ICT
DownloadVisualize
BU of 5ict by Molmil
Crystal structure of the Drosophila GluR1A ligand binding domain Y792T mutant complex with glutamate
分子名称: GLUTAMIC ACID, GLYCEROL, Glutamate receptor 1
著者Dharkar, P, Mayer, M.L.
登録日2016-02-23
公開日2016-12-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Novel Functional Properties of Drosophila CNS Glutamate Receptors.
Neuron, 92, 2016
1B5Z
DownloadVisualize
BU of 1b5z by Molmil
CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME: CALORIMETRY AND X-RAY ANALYSIS OF SIX SER->ALA MUTANTS
分子名称: LYSOZYME
著者Takano, K, Yamagata, Y, Kubota, M, Funahashi, J, Fujii, S, Yutani, K.
登録日1999-01-11
公開日1999-02-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.
Biochemistry, 38, 1999
5J45
DownloadVisualize
BU of 5j45 by Molmil
Crystal structure of Shrub, fly ortholog of SNF7/CHMP4B
分子名称: GH13992p
著者McMillan, B.J, Blacklow, S.C.
登録日2016-03-31
公開日2016-07-20
最終更新日2016-08-17
実験手法X-RAY DIFFRACTION (2.758 Å)
主引用文献Electrostatic Interactions between Elongated Monomers Drive Filamentation of Drosophila Shrub, a Metazoan ESCRT-III Protein.
Cell Rep, 16, 2016
1BZW
DownloadVisualize
BU of 1bzw by Molmil
PEANUT LECTIN COMPLEXED WITH C-LACTOSE
分子名称: CALCIUM ION, MANGANESE (II) ION, PROTEIN (PEANUT LECTIN), ...
著者Ravishankar, R, Surolia, A, Vijayan, M, Lim, S, Kishi, Y.
登録日1998-11-05
公開日1998-11-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Preferred Conformation of C-Lactose at the Free and Peanut Lectin Bound States
J.Am.Chem.Soc., 120, 1998
5JZM
DownloadVisualize
BU of 5jzm by Molmil
Structure of wild type Amidase from Vibrio cholerae 0395 at low temparature at 1.8 Angstroms resolution.
分子名称: Intracellular protease/amidase
著者Chowdhury, S.R, Sen, U.
登録日2016-05-17
公開日2016-06-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structure of wild type Amidase from Vibrio cholerae 0395 at high temparature at 1.8 Angstroms resolution.
To Be Published
5JZO
DownloadVisualize
BU of 5jzo by Molmil
Structure of wild type amidase at high temperature at 2.5 Angstrom resolution
分子名称: Intracellular protease/amidase
著者Chowdhury, S.R, Sen, U.
登録日2016-05-17
公開日2016-06-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of wild type amidase at high temperature at 2.5 Angstrom resolution
To Be Published
5K4A
DownloadVisualize
BU of 5k4a by Molmil
Structure of the amidase mutant E79A at 2.3 Angstrom resolution
分子名称: Intracellular protease/amidase
著者Chowdhury, S.R, Sen, U.
登録日2016-05-20
公開日2016-06-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the amidase mutant E79A at 2.3 Angstrom resolution
To Be Published
1B76
DownloadVisualize
BU of 1b76 by Molmil
GLYCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Glycine--tRNA ligase
著者Arnez, J.G, Moras, D.
登録日1999-01-27
公開日1999-01-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Glycyl-tRNA synthetase uses a negatively charged pit for specific recognition and activation of glycine.
J.Mol.Biol., 286, 1999
1B8I
DownloadVisualize
BU of 1b8i by Molmil
STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX
分子名称: DNA (5'-D(*AP*CP*GP*TP*GP*AP*TP*TP*TP*AP*TP*GP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*CP*AP*TP*AP*AP*AP*TP*CP*AP*C)-3'), PROTEIN (HOMEOBOX PROTEIN EXTRADENTICLE), ...
著者Passner, J.M, Ryoo, H.-D, Shen, L, Mann, R.S, Aggarwal, A.K.
登録日1999-02-01
公開日1999-04-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of a DNA-bound Ultrabithorax-Extradenticle homeodomain complex.
Nature, 397, 1999

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon