PDB: 95574 件ウェブページステータス検索Chemie searchBIRD

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6WB8	Cryo-EM structure of PKD2 C331S disease variant 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Polycystin-2 著者 Cao, E, Wang, J, Decaen, P.G. 登録日 2020-03-26 公開日 2020-04-22 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (3.24 Å) 主引用文献 Molecular dysregulation of ciliary polycystin-2 channels caused by variants in the TOP domain. Proc.Natl.Acad.Sci.USA, 117, 2020
4UWT	Hypocrea jecorina Cel7A E212Q mutant in complex with p-nitrophenyl cellobioside 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLOBIOHYDROLASE CEL7A, COBALT (II) ION, ... 著者 Nutt, A, Momeni, M.H, Johansson, G, Stahlberg, J. 登録日 2014-08-14 公開日 2015-08-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Enzyme kinetics by GH7 cellobiohydrolases on chromogenic substrates is dictated by non-productive binding: insights from crystal structures and MD simulation. Febs J., 2022
5AHG	Thrombin in complex with ((4-chlorophenyl)sulfamoyl))diemethylamine 分子名称: ((4-Chlorophenyl)sulfamoyl))dimethylamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ... 著者 Ruehmann, E, Heine, A, Klebe, G. 登録日 2015-02-06 公開日 2015-08-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.24 Å) 主引用文献 Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why. J.Med.Chem., 58, 2015
5AF9	Thrombin in complex with 4-Methoxy-N-(2-pyridinyl)benzamide 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-methoxy-N-(pyridin-2-yl)benzamide, ... 著者 Ruehmann, E, Heine, A, Klebe, G. 登録日 2015-01-20 公開日 2015-08-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why. J.Med.Chem., 58, 2015
5AFY	Thrombin in complex with 3-chloro-benzamide 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-CHLORO-BENZAMIDE, DIMETHYL SULFOXIDE, ... 著者 Ruehmann, E, Heine, A, Klebe, G. 登録日 2015-01-27 公開日 2015-08-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why. J.Med.Chem., 58, 2015
5AFZ	Thrombin in complex with (2R)-2-(benzylsulfonylamino)-N-(2-((4- carbamimidoylphenyl)methylamino)-2-oxo-propyl)-3-phenyl-propanamide 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hirudin-2, N-(BENZYLSULFONYL)-D-PHENYLALANYL-N-(4-CARBAMIMIDOYLBENZYL)GLYCINAMIDE, ... 著者 Ruehmann, E, Heine, A, Klebe, G. 登録日 2015-01-27 公開日 2015-08-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why. J.Med.Chem., 58, 2015
4PLI	Structure of the chromodomain of MRG2 in complex with H3K36me3 分子名称: At1g02740, H3K36me3 著者 Liu, Y, Huang, Y. 登録日 2014-05-18 公開日 2015-07-22 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.651 Å) 主引用文献 Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression. Plos Genet., 10, 2014
6W1A	Crystal structure of Streptococcus dysgalactiae SHP pheromone receptor Rgg2 bound to DNA 分子名称: DNA (30-MER), GLYCEROL, PHOSPHATE ION, ... 著者 Capodagli, G.C, Neiditch, M.B. 登録日 2020-03-03 公開日 2020-10-21 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure-function studies of Rgg binding to pheromones and target promoters reveal a model of transcription factor interplay. Proc.Natl.Acad.Sci.USA, 117, 2020
3CTY	Crystal structure of T. acidophilum thioredoxin reductase 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase 著者 Hernandez, H.H, Drennan, C.L. 登録日 2008-04-14 公開日 2009-02-24 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Thioredoxin reductase from Thermoplasma acidophilum: a new twist on redox regulation. Biochemistry, 47, 2008
3COG	Crystal structure of human cystathionase (Cystathionine gamma lyase) in complex with DL-propargylglycine 分子名称: (2S)-2-aminopent-4-enoic acid, Cystathionine gamma-lyase, DI(HYDROXYETHYL)ETHER, ... 著者 Collins, R, Karlberg, T, Lehtio, L, Arrowsmith, C.H, Berglund, H, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Olesen, K, Persson, C, Schuler, H, Svensson, L, Thorsell, A.G, Tresaugues, L, Van den Berg, S, Sagermark, J, Busam, R.D, Welin, M, Weigelt, J, Wikstrom, M, Structural Genomics Consortium (SGC) 登録日 2008-03-28 公開日 2008-05-27 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis for the inhibition mechanism of human cystathionine gamma-lyase, an enzyme responsible for the production of H(2)S. J.Biol.Chem., 284, 2009
4GPB	COMPARISON OF THE BINDING OF GLUCOSE AND GLUCOSE-1-PHOSPHATE DERIVATIVES TO T-STATE GLYCOGEN PHOSPHORYLASE B 分子名称: 2-deoxy-2-fluoro-1-O-phosphono-alpha-D-glucopyranose, GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE 著者 Martin, J.L, Johnson, L.N. 登録日 1990-06-04 公開日 1992-10-15 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Comparison of the binding of glucose and glucose 1-phosphate derivatives to T-state glycogen phosphorylase b. Biochemistry, 29, 1990
7NYI	BacSp222 bacteriocin: succinyl-K20 form 分子名称: Bacteriocin BacSp222 著者 Nowakowski, M, Mak, P, Smialek, J. 登録日 2021-03-22 公開日 2021-07-07 最終更新日 2021-07-14 実験手法 SOLUTION NMR 主引用文献 Structure, Biosynthesis, and Biological Activity of Succinylated Forms of Bacteriocin BacSp222. Int J Mol Sci, 22, 2021
5HY2	Structure-function analysis of functionally diverse members of the cyclic amide hydrolase family of Toblerone fold enzymes 分子名称: Ring-opening amidohydrolase 著者 Peat, T.S, Balotra, S, Wilding, M, Newman, J, Scott, C. 登録日 2016-02-01 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
5HWE	high resolution structure of barbiturase 分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, Barbiturase, MAGNESIUM ION, ... 著者 Peat, T.S, Scott, C. 登録日 2016-01-29 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
5HXZ	Structure-function analysis of functionally diverse members of the cyclic amide hydrolase family of Toblerone fold enzymes 分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, Barbiturase, CHLORIDE ION, ... 著者 Peat, T.S, Balotra, S, Wilding, M, Newman, J, Scott, C. 登録日 2016-01-31 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
5HU3	Drosophila CaMKII-D136N in complex with a phosphorylated fragment of the Eag potassium channel and Mg2+/ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Calcium/calmodulin-dependent protein kinase type II alpha chain, MAGNESIUM ION, ... 著者 Castro-Rodrigues, A.F, Morais-Cabral, J.H. 登録日 2016-01-27 公開日 2017-02-01 最終更新日 2019-11-13 実験手法 X-RAY DIFFRACTION (1.885 Å) 主引用文献 The Interaction between the Drosophila EAG Potassium Channel and the Protein Kinase CaMKII Involves an Extensive Interface at the Active Site of the Kinase. J.Mol.Biol., 430, 2018
5HXU	Structure-function analysis of functionally diverse members of the cyclic amide hydrolase family of Toblerone fold enzymes 分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, Barbiturase, CHLORIDE ION, ... 著者 Peat, T.S, Balotra, S, Wilding, M, Newman, J, Scott, C. 登録日 2016-01-31 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
5HY1	high resolution structure of barbiturase 分子名称: 1,3,5-triazine-2,4,6-triol, Barbiturase, CHLORIDE ION, ... 著者 Peat, T.S, Scott, C, Balotra, S, Wilding, M, Newman, J. 登録日 2016-02-01 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
4V33	Crystal structure of the putative polysaccharide deacetylase BA0330 from bacillus anthracis 分子名称: 1,2-ETHANEDIOL, ACETATE ION, POLYSACCHARIDE DEACETYLASE-LIKE PROTEIN, ... 著者 Giastas, P, Andreou, A, Bouriotis, V, Eliopoulos, E. 登録日 2014-10-16 公開日 2015-04-08 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Two Putative Polysaccharide Deacetylases are Required for Osmotic Stability and Cell Shape Maintenance in Bacillus Anthracis. J.Biol.Chem., 290, 2015
4UT5	Crystal structure of the LecB lectin from Pseudomonas aeruginosa strain PA7 in complex with lewis a tetrasaccharide 分子名称: CALCIUM ION, LECB LECTIN, beta-D-galactopyranose, ... 著者 Boukerb, A.M, Decor, A, Tabaroni, R, Varrot, A, Debentzmann, S, Vidal, S, Imberty, A, Cournoyer, B. 登録日 2014-07-18 公開日 2015-07-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Genomic Rearrangements and Functional Diversification of Leca and Lecb Lectin-Coding Regions Impacting the Efficacy of Glycomimetics Directed Against Pseudomonas Aeruginosa. Front.Microbiol., 7, 2016
6CRO	CRYSTAL STRUCTURE OF LAMBDA-CRO BOUND TO A CONSENSUS OPERATOR AT 3.0 ANGSTROM RESOLUTION 分子名称: DNA (5'-D(*AP*CP*TP*AP*TP*CP*AP*CP*CP*GP*CP*GP*GP*GP*TP*GP*AP*TP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*AP*TP*CP*AP*CP*CP*CP*GP*CP*GP*GP*TP*GP*AP*TP*AP*G)-3'), LAMBDA CRO REPRESSOR, ... 著者 Albright, R.A, Matthews, B.W. 登録日 1998-04-22 公開日 1998-09-18 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of lambda-Cro bound to a consensus operator at 3.0 A resolution. J.Mol.Biol., 280, 1998
4XDS	Deoxyguanosinetriphosphate Triphosphohydrolase from Escherichia coli with Nickel 分子名称: Deoxyguanosinetriphosphate triphosphohydrolase, NICKEL (II) ION, SULFATE ION 著者 Singh, D, Gawel, D, Itsko, M, Krahn, J.M, London, R.E, Schaaper, R.M. 登録日 2014-12-19 公開日 2015-02-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.354 Å) 主引用文献 Structure of Escherichia coli dGTP Triphosphohydrolase: A HEXAMERIC ENZYME WITH DNA EFFECTOR MOLECULES. J.Biol.Chem., 290, 2015
4PAD	Binding of chloromethyl ketone substrate analogues to crystalline papain 分子名称: N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide, PAPAIN 著者 Drenth, J. 登録日 1976-11-01 公開日 1977-04-12 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Binding of chloromethyl ketone substrate analogues to crystalline papain. Biochemistry, 15, 1976
7NRX	Straight filament from Alzheimer's disease with PET ligand APN-1607 分子名称: Microtubule-associated protein tau 著者 Shi, Y, Murzin, A.G, Falcon, B, Epstein, A, Machin, J, Tempest, P, Newell, K.L, Vidal, R, Garringer, H.J, Sahara, N, Higuchi, M, Ghetti, B, Jang, M, Scheres, S.H.W, Goedert, M. 登録日 2021-03-04 公開日 2021-03-24 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.55 Å) 主引用文献 Cryo-EM structures of tau filaments from Alzheimer's disease with PET ligand APN-1607. Acta Neuropathol, 141, 2021
5NW5	Crystal structure of the Rif1 N-terminal domain (RIF1-NTD) from Saccharomyces cerevisiae in complex with DNA 分子名称: DNA (30-MER), DNA (60-MER), Telomere length regulator protein RIF1 著者 Bunker, R.D, Reinert, J.K, Shi, T, Thoma, N.H. 登録日 2017-05-05 公開日 2017-06-14 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (6.502 Å) 主引用文献 Rif1 maintains telomeres and mediates DNA repair by encasing DNA ends. Nat. Struct. Mol. Biol., 24, 2017

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