PDB: 20503 件ウェブページステータス検索Chemie searchBIRD

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6VE9	Solution NMR structure of enterococcal cytolysin S (CylLS") produced by Enterococcus faecalis 分子名称: enterococcal cytolysin S 著者 Bobeica, S.C, van der Donk, W.A, Zhu, L, Tang, W. 登録日 2019-12-30 公開日 2020-07-08 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Structural determinants of macrocyclization in substrate-controlled lanthipeptide biosynthetic pathways. Chem Sci, 11, 2020
6V5L	The HADDOCK structure model of GDP KRas in complex with its allosteric inhibitor E22 分子名称: (2R)-2-[2-(1H-indole-3-carbonyl)hydrazinyl]-2-phenylacetamide, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Wang, X, Gupta, A.K, Prakash, P, Putkey, J.P, Gorfe, A.A. 登録日 2019-12-04 公開日 2019-12-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Multi target ensemble based virtual screening yields novel allosteric KRAS inhibitors at high success rate Chemical Biology & Drug Design, 94, 2019
8V9U	Solution NMR structure of human DNMT1 N-terminal alpha-helical domain 分子名称: DNA (cytosine-5)-methyltransferase 1 著者 Hu, Q, Botuyan, M.V, Mer, G. 登録日 2023-12-09 公開日 2024-02-28 最終更新日 2024-06-05 実験手法 SOLUTION NMR 主引用文献 Identification of a conserved alpha-helical domain at the N terminus of human DNA methyltransferase 1. J.Biol.Chem., 300, 2024
6QAY	Structural investigation of the TasA anchoring protein TapA from Bacillus subtilis 分子名称: TasA anchoring/assembly protein 著者 Higman, V.A, Schmieder, P, Diehl, A, Oschkinat, H. 登録日 2018-12-20 公開日 2020-01-29 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 TapA acts as specific chaperone in TasA filament formation by strand complementation. Proc.Natl.Acad.Sci.USA, 120, 2023
5NQ4	Cytotoxin-1 in DPC-micelle 分子名称: Cytotoxin 1 著者 Dubovskii, P.V, Dubinnyi, M.A, Volynsky, P.E, Pustovalova, Y.E, Konshina, A.G, Utkin, Y.N, Efremov, R.G, Arseniev, A.S. 登録日 2017-04-19 公開日 2017-12-13 最終更新日 2019-05-08 実験手法 SOLUTION NMR 主引用文献 Impact of membrane partitioning on the spatial structure of an S-type cobra cytotoxin. J. Biomol. Struct. Dyn., 36, 2018
7D8K	Solution structure of the methyl-CpG binding domain of MBD6 from Arabidopsis thaliana 分子名称: Methyl-CpG-binding domain-containing protein 6 著者 Mahana, Y, Ohki, I, Walinda, E, Morimoto, D, Sugase, K, Shirakawa, M. 登録日 2020-10-08 公開日 2021-10-20 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural Insights into Methylated DNA Recognition by the Methyl-CpG Binding Domain of MBD6 from Arabidopsis thaliana . Acs Omega, 7, 2022
8CX6	TPX2 Minimal Active Domain on Microtubules 分子名称: Targeting protein for Xklp2-A 著者 Guo, C, Alfaro-Aco, R, Russell, R, Zhang, C, Petry, S, Polenova, T. 登録日 2022-05-19 公開日 2023-06-28 最終更新日 2024-05-15 実験手法 SOLID-STATE NMR 主引用文献 Structural basis of protein condensation on microtubules underlying branching microtubule nucleation. Nat Commun, 14, 2023
7WKF	Antimicrobial peptide-LaIT2 分子名称: Beta-KTx-like peptide LaIT2 著者 Tamura, M, Morita, H, Ohki, S. 登録日 2022-01-09 公開日 2023-04-05 実験手法 SOLUTION NMR 主引用文献 Structural and functional studies of LaIT2, an antimicrobial and insecticidal peptide from Liocheles australasiae. Toxicon, 214, 2022
5SYQ	Solution structure of Aquifex aeolicus Aq1974 分子名称: Uncharacterized protein aq_1974 著者 Sachleben, J.R, Gawlak, G, Hoey, R.J, Liu, G, Joachimiak, A, Montelione, G.T, Koide, S, Northeast Structural Genomics Consortium (NESG), Midwest Center for Structural Genomics (MCSG) 登録日 2016-08-11 公開日 2016-09-28 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Aromatic claw: A new fold with high aromatic content that evades structural prediction. Protein Sci., 26, 2017
6X1K	Solution NMR structure of de novo designed TMB2.3 分子名称: De novo designed transmembrane beta-barrel TMB2.3 著者 Liang, B, Vorobieva, A.A, Chow, C.M, Baker, D, Tamm, L.K. 登録日 2020-05-19 公開日 2021-02-17 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 De novo design of transmembrane beta barrels. Science, 371, 2021
8C5J	Spatial structure of Lch-alpha peptide from two-component lantibiotic system Lichenicidin VK21 分子名称: Lantibiotic lichenicidin VK21 A1 著者 Mineev, K.S, Paramonov, A.S, Arseniev, A.S, Ovchinnikova, T.V, Shenkarev, Z.O. 登録日 2023-01-09 公開日 2023-03-22 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Specific Binding of the alpha-Component of the Lantibiotic Lichenicidin to the Peptidoglycan Precursor Lipid II Predetermines Its Antimicrobial Activity. Int J Mol Sci, 24, 2023
5NHQ	Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein 分子名称: Agnoprotein 著者 Coric, P, Saribas, A.S, Abou-Gharbia, M, Childers, W, Condra, J, White, M.K, Safak, M, Bouaziz, S. 登録日 2017-03-22 公開日 2017-04-26 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein. J. Cell. Biochem., 118, 2017
5NKO	Solution structure of the C-terminal domain of S. aureus Hibernating Promoting Factor (CTD-SaHPF) 分子名称: Ribosome hibernation promotion factor 著者 Usachev, K.S, Khusainov, I.S, Ayupov, R.K, Validov, S.Z, Kieffer, B, Yusupov, M.M. 登録日 2017-03-31 公開日 2017-07-05 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Structures and dynamics of hibernating ribosomes from Staphylococcus aureus mediated by intermolecular interactions of HPF. EMBO J., 36, 2017
6YGW	TGT W178F mutant labelled mit 5F-Trp crystallised at pH 5.5 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, GLYCEROL, ... 著者 Nguyen, A, Heine, A, Klebe, G. 登録日 2020-03-27 公開日 2020-04-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 Mutation study on tRNA-guanine transglycosylase within 19F NMR experiments for conformational change analysis To Be Published
6YGP	TGT WT labelled mit 5F-Trp crystallised at pH 5.5 分子名称: CHLORIDE ION, GLYCEROL, Queuine tRNA-ribosyltransferase, ... 著者 Nguyen, A, Heine, A, Klebe, G. 登録日 2020-03-27 公開日 2020-04-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.33 Å) 主引用文献 Mutation study on tRNA-guanine transglycosylase within 19F NMR experiments for conformational change analysis To Be Published
6YGO	TGT W95F mutant labelled mit 5F-Trp crystallised at pH 8.5 分子名称: GLYCEROL, Queuine tRNA-ribosyltransferase, ZINC ION 著者 Nguyen, A, Heine, A, Klebe, G. 登録日 2020-03-27 公開日 2020-04-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 Mutation study on tRNA-guanine transglycosylase within 19F NMR experiments for conformational change analysis To Be Published
6YGM	TGT W95F mutant labelled mit 5F-Trp crystallised at pH 5.5 分子名称: Queuine tRNA-ribosyltransferase, ZINC ION 著者 Nguyen, A, Heine, A, Klebe, G. 登録日 2020-03-27 公開日 2020-04-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 Mutation study on tRNA-guanine transglycosylase within 19F NMR experiments for conformational change analysis To Be Published
6YGL	TGT W326F mutant labelled mit 5F-Trp crystallised at pH 5.5 分子名称: CHLORIDE ION, GLYCEROL, Queuine tRNA-ribosyltransferase, ... 著者 Nguyen, A, Heine, A, Klebe, G. 登録日 2020-03-27 公開日 2020-04-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Mutation study on tRNA-guanine transglycosylase within 19F NMR experiments for conformational change analysis To Be Published
8C18	Solution structure of carotenoid-binding protein AstaPo1 in complex with astaxanthin 分子名称: ASTAXANTHIN, Astaxanthin binding fasciclin family protein 著者 Kornilov, F.D, Savitskaya, A.G, Slonimskiy, Y.B, Goncharuk, S.A, Sluchanko, N.N, Mineev, K.S. 登録日 2022-12-20 公開日 2023-04-05 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Structural basis for the ligand promiscuity of the neofunctionalized, carotenoid-binding fasciclin domain protein AstaP. Commun Biol, 6, 2023
6XEH	Solution NMR Structure of DE NOVO DESIGNED Rossmann 2x3 Fold Protein r2x3_168, Northeast Structural Genomics Consortium (NESG) Target OR386 分子名称: DE NOVO DESIGNED OR386 著者 Liu, G, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2020-06-12 公開日 2020-08-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Role of backbone strain in de novo design of complex alpha/beta protein structures Accurate de novo design of asymetric alpha/beta proteins with ten or more secondary structure elements requires consideration of backbone strain Design principle proposed from designed larger alpha/beta-proteins not folded as designed: Consistency between local, non-local, and global structures To Be Published
8DYM	Aspartimidylated Graspetide Amycolimiditide 分子名称: ATP-grasp target RiPP 著者 Link, A.J, Choi, B. 登録日 2022-08-04 公開日 2022-11-16 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Mechanistic Analysis of the Biosynthesis of the Aspartimidylated Graspetide Amycolimiditide. J.Am.Chem.Soc., 144, 2022
5NYS	M2 G-quadruplex dilute solution 分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') 著者 Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N. 登録日 2017-05-11 公開日 2018-04-11 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations. Nucleic Acids Res., 46, 2018
5NYT	M2 G-quadruplex 20 wt% ethylene glycol 分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') 著者 Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N. 登録日 2017-05-11 公開日 2018-04-11 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations. Nucleic Acids Res., 46, 2018
5NYU	M2 G-quadruplex 10 wt% PEG8000 分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') 著者 Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N. 登録日 2017-05-11 公開日 2018-04-11 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations. Nucleic Acids Res., 46, 2018
2YT1	Solution structure of the chimera of the C-terminal tail peptide of APP and the C-terminal PID domain of Fe65L 分子名称: Amyloid beta A4 protein and Amyloid beta A4 precursor protein-binding family B member 2 著者 Li, H, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-05 公開日 2008-04-08 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode J.Biol.Chem., 283, 2008

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