PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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5KWZ	NMR Solution Structure of Designed Peptide NC_cHH_D1 分子名称: Designed peptide NC_cHH_D1 著者 Harvey, P.J, Craik, D.J. 登録日 2016-07-19 公開日 2016-09-21 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016
4PA8	Crystal structure of a de novo retro-aldolase catalyzing asymmetric Michael additions, with a covalently bound product analog 分子名称: (3R)-3-(4-methoxyphenyl)-5-oxohexanenitrile, GLYCEROL, SULFATE ION, ... 著者 Beck, T, Garrabou Pi, X, Hilvert, D. 登録日 2014-04-07 公開日 2015-04-01 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 A Promiscuous De Novo Retro-Aldolase Catalyzes Asymmetric Michael Additions via Schiff Base Intermediates. Angew.Chem.Int.Ed.Engl., 54, 2015
5KX0	NMR Solution Structure of Designed Peptide NC_cHh_DL_D1 分子名称: Designed peptide NC_cHh_DL_D1 著者 Harvey, P.J, Craik, D.J. 登録日 2016-07-19 公開日 2016-09-21 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016
5KWP	NMR Solution Structure of Designed Peptide NC_EEH_D2 分子名称: Designed peptide NC_EEH_D2 著者 Harvey, P.J, Craik, D.J. 登録日 2016-07-18 公開日 2016-09-21 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016
5KX1	NMR Solution Structure of Designed Peptide NC_cHHH_D1 分子名称: Designed peptide NC_cHHH_D1 著者 Harvey, P.J, Craik, D.J. 登録日 2016-07-19 公開日 2016-09-21 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016
5KVN	NMR Solution Structure of Designed Peptide NC_HEE_D1 分子名称: Designed peptide NC_HEE_D1 著者 Harvey, P.J, Craik, D.J. 登録日 2016-07-14 公開日 2016-09-21 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016
7JXT	Ovine COX-1 in complex with the subtype-selective derivative 2a 分子名称: 2-[4,5-bis(2-chlorophenyl)-1H-imidazol-2-yl]-6-(prop-2-en-1-yl)phenyl methoxyacetate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Ko, Y, Iaselli, M, Miciaccia, M, Friedrich, L, Schneider, G, Scilimati, A, Cingolani, G. 登録日 2020-08-27 公開日 2021-09-01 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Learning from Nature: From a Marine Natural Product to Synthetic Cyclooxygenase-1 Inhibitors by Automated De Novo Design. Adv Sci, 8, 2021
5LFN	Crystal structure of human chondroadherin 分子名称: CHLORIDE ION, Chondroadherin 著者 Ramisch, S, Pramhed, A, Logan, D.T. 登録日 2016-07-03 公開日 2016-12-28 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of human chondroadherin: solving a difficult molecular-replacement problem using de novo models. Acta Crystallogr D Struct Biol, 73, 2017
7BWW	Structure of the engineered metallo-Diels-Alderase DA7 W16S 分子名称: ACETIC ACID, BENZOIC ACID, DI(HYDROXYETHYL)ETHER, ... 著者 Basler, S, Mori, T, Hilvert, D. 登録日 2020-04-16 公開日 2021-04-21 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Efficient Lewis acid catalysis of an abiological reaction in a de novo protein scaffold. Nat.Chem., 13, 2021
7BAT	A hexameric barrel state of a de novo coiled-coil assembly: CC-Type2-(GgIaId)4 分子名称: CC-Type2-(GgIaId)4, N-PROPANOL 著者 Martin, F.J.O, Dawson, W.M, Shelley, K, Brady, R.L, Woolfson, D.N. 登録日 2020-12-16 公開日 2021-04-28 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states. Chem Sci, 12, 2021
7BAS	A de novo pentameric coiled-coil assembly: CC-Type2-(TgLaId)4-W19BrPhe. 分子名称: CC-Type2-(TgLaId)4-W19BrPhe. 著者 Martin, F.J.O, Dawson, W.M, Shelley, K, Brady, R.L, Woolfson, D.N. 登録日 2020-12-16 公開日 2021-04-28 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states. Chem Sci, 12, 2021
7BAU	A de novo pentameric coiled-coil assembly: CC-Type2-(TgIaId)4-W19BrPhe. 分子名称: CC-Type2-(TgLaId)4-W19BrPhe. 著者 Martin, F.J.O, Dawson, W.M, Shelley, K, Brady, R.L, Woolfson, D.N. 登録日 2020-12-16 公開日 2021-04-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states. Chem Sci, 12, 2021
7BAV	A de novo pentameric coiled-coil assembly: CC-Type2-(TgLaId)4-W19BrPhe. 分子名称: CC-Type2-(TgLaId)4-W19BrPhe 著者 Martin, F.J.O, Dawson, W.M, Shelley, K, Brady, R.L, Woolfson, D.N. 登録日 2020-12-16 公開日 2021-04-28 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states. Chem Sci, 12, 2021
7BAW	A heptameric barrel state of a de novo coiled-coil assembly: CC-Type2-(GgIaId)4 分子名称: CC-Type2-(GgIaId)4, GLYCEROL, N-PROPANOL 著者 Martin, F.J.O, Dawson, W.M, Brady, R.L, Woolfson, D.N. 登録日 2020-12-16 公開日 2021-04-28 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states. Chem Sci, 12, 2021
7A1T	A collapsed hexameric state of a de novo coiled-coil assembly: CC-Type2-(GgLaId)4-W19BrPhe. 分子名称: ACETATE ION, CADMIUM ION, CC-Type2-(GgLaId)4-W19BrPhe, ... 著者 Rhys, G.G, Brady, R.L, Woolfson, D.N. 登録日 2020-08-14 公開日 2021-05-19 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states. Chem Sci, 12, 2021
7EKJ	Crystals structure of classical swine fever virus NS5B (residues 91-694) 分子名称: Classical swine fever virus NS5B 著者 Liu, W, Gong, P. 登録日 2021-04-05 公開日 2021-07-28 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.06 Å) 主引用文献 An induced-fit de novo initiation mechanism suggested by a pestivirus RNA-dependent RNA polymerase. Nucleic Acids Res., 49, 2021
5IZQ	Crystal structure of human folate receptor alpha in complex with novel antifolate AGF183 分子名称: Folate receptor alpha, N-(4-{[2-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)ethyl]amino}benzene-1-carbonyl)-L-glutamic acid 著者 Ke, J, Gu, X, Brunzelle, J.S, Xu, H.E, Melcher, K. 登録日 2016-03-25 公開日 2016-08-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Tumor Targeting with Novel 6-Substituted Pyrrolo [2,3-d] Pyrimidine Antifolates with Heteroatom Bridge Substitutions via Cellular Uptake by Folate Receptor alpha and the Proton-Coupled Folate Transporter and Inhibition of de Novo Purine Nucleotide Biosynthesis. J.Med.Chem., 59, 2016
1ABZ	ALPHA-T-ALPHA, A DE NOVO DESIGNED PEPTIDE, NMR, 23 STRUCTURES 分子名称: ALPHA-T-ALPHA 著者 Fezoui, Y, Connolly, P.J, Osterhout, J.J. 登録日 1997-01-31 公開日 1998-02-04 最終更新日 2022-02-16 実験手法 SOLUTION NMR 主引用文献 Solution structure of alpha t alpha, a helical hairpin peptide of de novo design. Protein Sci., 6, 1997
6W3F	Rd1NTF2_05_I64F_A80G_T94P_D101K_L106W 分子名称: Rd1NTF2_05_I64F_A80G_T94P_D101K_L106W 著者 Bick, M.J, Basanta, B, Sankaran, B, Baker, D. 登録日 2020-03-09 公開日 2020-04-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 An enumerative algorithm for de novo design of proteins with diverse pocket structures. Proc.Natl.Acad.Sci.USA, 117, 2020
5OER	Hen egg-white lysozyme refined against 5000 9 keV diffraction patterns 分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, GADOLINIUM ATOM, Lysozyme C, ... 著者 Gorel, A, Schlichting, I. 登録日 2017-07-09 公開日 2017-10-25 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability. Nat Commun, 8, 2017
6TQI	I-MOTIF STRUCTURE FORMED FROM THE C STRAND OF A HUMAN TELOMERE FRAGMENT 分子名称: DNA (5'-*TP*AP*AP*CP*CP*CP*TP*AP*A-3') 著者 Parkinson, G.N, Wagner, A, Viladoms-Claverol, J, Duman, R, El-Omari, K. 登録日 2019-12-16 公開日 2020-06-10 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths. Nucleic Acids Res., 48, 2020
6W3D	Rd1NTF2_05 with long sheet 分子名称: Rd1NTF2_05 著者 Bick, M.J, Basanta, B, Sankaran, B, Baker, D. 登録日 2020-03-09 公開日 2020-04-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 An enumerative algorithm for de novo design of proteins with diverse pocket structures. Proc.Natl.Acad.Sci.USA, 117, 2020
6W3G	Rd1NTF2_04 with long sheet 分子名称: Rd1NTF2_04 著者 Bick, M.J, Basanta, B, Sankaran, B, Baker, D. 登録日 2020-03-09 公開日 2020-04-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 An enumerative algorithm for de novo design of proteins with diverse pocket structures. Proc.Natl.Acad.Sci.USA, 117, 2020
5K1S	crystal structure of AibC 分子名称: Oxidoreductase, zinc-binding dehydrogenase family, ZINC ION 著者 Bock, T, Mueller, R, Blankenfeldt, W. 登録日 2016-05-18 公開日 2016-08-10 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Crystal structure of AibC, a reductase involved in alternative de novo isovaleryl coenzyme A biosynthesis in Myxococcus xanthus. Acta Crystallogr.,Sect.F, 72, 2016
8PK8	Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (persulfide on ISCU2) 分子名称: Acyl carrier protein, Cysteine desulfurase, FE (II) ION, ... 著者 Steinhilper, R, Murphy, B.J. 登録日 2023-06-26 公開日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.49 Å) 主引用文献 Mechanism and structural dynamics of sulfur transfer during de novo [2Fe-2S] cluster assembly on ISCU2. Nat Commun, 15, 2024

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