Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1SOA
DownloadVisualize
BU of 1soa by Molmil
Human DJ-1 with sulfinic acid
分子名称: RNA-binding protein regulatory subunit; oncogene DJ1
著者Canet-Aviles, R, Wilson, M.A, Miller, D.W, Ahmad, R, McLendon, C, Bandyopadhyay, S, Baptista, M.J, Ringe, D, Petsko, G.A, Cookson, M.R.
登録日2004-03-13
公開日2004-06-22
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The Parkinson's disease protein DJ-1 is neuroprotective due to cysteine-sulfinic acid-driven mitochondrial localization.
Proc.Natl.Acad.Sci.USA, 101, 2004
4EIZ
DownloadVisualize
BU of 4eiz by Molmil
Structure of Nb113 bound to apoDHFR
分子名称: Dihydrofolate reductase, Nb113 Camel antibody fragment
著者Oyen, D, Srinivasan, V.
登録日2012-04-06
公開日2013-04-24
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanistic analysis of allosteric and non-allosteric effects arising from nanobody binding to two epitopes of the dihyrofolate reductase of Escherichia coli.
Biochim.Biophys.Acta, 1834, 2013
1N24
DownloadVisualize
BU of 1n24 by Molmil
(+)-Bornyl diphosphate synthase: Complex with Mg and product
分子名称: (+)-BORNYL DIPHOSPHATE, (+)-bornyl diphosphate synthase, MAGNESIUM ION
著者Whittington, D.A, Wise, M.L, Urbansky, M, Coates, R.M, Croteau, R.B, Christianson, D.W.
登録日2002-10-21
公開日2002-11-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bornyl diphosphate synthase: Structure and strategy for carbocation manipulation by a terpenoid cyclase
Proc.Natl.Acad.Sci.USA, 99, 2002
1N2R
DownloadVisualize
BU of 1n2r by Molmil
A natural selected dimorphism in HLA B*44 alters self, peptide reportoire and T cell recognition.
分子名称: ACETIC ACID, Beta-2-microglobulin, HLA DPA*0201 PEPTIDE, ...
著者Macdonald, W.A, Purcell, A.W, Williams, D.S, Mifsud, N, Ely, L.K, Gorman, J.J, Clements, C.S, Kjer-Nielsen, L, Koelle, D.M, Brooks, A.G, Lovrecz, G.O, Lu, L, Rossjohn, J, McCluskey, J.
登録日2002-10-24
公開日2004-03-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A naturally selected dimorphism within the HLA-B44 supertype alters class I structure, peptide repertoire, and T cell recognition.
J.Exp.Med., 198, 2003
3D5N
DownloadVisualize
BU of 3d5n by Molmil
Crystal structure of the Q97W15_SULSO protein from Sulfolobus solfataricus. NESG target SsR125.
分子名称: Q97W15_SULSO
著者Vorobiev, S.M, Chen, Y, Seetharaman, J, Lee, D, Foote, R.E, Maglaqui, M, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-05-16
公開日2008-07-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the Q97W15_SULSO protein from Sulfolobus solfataricus. NESG target SsR125.
To be Published
2FYI
DownloadVisualize
BU of 2fyi by Molmil
Crystal Structure of the Cofactor-Binding Domain of the Cbl Transcriptional Regulator
分子名称: HTH-type transcriptional regulator cbl
著者Stec, E, Neumann, P, Wilkinson, A.J, Brzozowski, A.M, Bujacz, G.D.
登録日2006-02-08
公開日2006-02-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis of the Sulphate Starvation Response in E. coli: Crystal Structure and Mutational Analysis of the Cofactor-binding Domain of the Cbl Transcriptional Regulator.
J.Mol.Biol., 364, 2006
4XPH
DownloadVisualize
BU of 4xph by Molmil
X-ray structure of Drosophila dopamine transporter with subsiteB mutations (D121G/S426M) bound to 3,4dichlorophenethylamine
分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-(3,4-dichlorophenyl)ethanamine, Antibody fragment heavy chain, ...
著者Penmatsa, A, Wang, K, Gouaux, E.
登録日2015-01-17
公開日2015-05-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Neurotransmitter and psychostimulant recognition by the dopamine transporter.
Nature, 521, 2015
3D3Q
DownloadVisualize
BU of 3d3q by Molmil
Crystal structure of tRNA delta(2)-isopentenylpyrophosphate transferase (SE0981) from Staphylococcus epidermidis. Northeast Structural Genomics Consortium target SeR100
分子名称: tRNA delta(2)-isopentenylpyrophosphate transferase
著者Forouhar, F, Abashidze, M, Seetharaman, J, Mao, L, Xiao, R, Maglaqui, M, Lee, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-05-12
公開日2008-07-15
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of tRNA delta(2)-isopentenylpyrophosphate transferase (SE0981) from Staphylococcus epidermidis.
To be Published
2G0I
DownloadVisualize
BU of 2g0i by Molmil
Crystal structure of SMU.848 from Streptococcus mutans
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, hypothetical protein SMU.848
著者Hou, H.-F, Gao, Z.-Q, Li, L.-F, Liang, Y.-H, Su, X.-D, Dong, Y.-H.
登録日2006-02-13
公開日2006-08-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of SMU.848 from Streptococcus mutans
To be Published
3KEE
DownloadVisualize
BU of 3kee by Molmil
HCV NS3/NS4A complexed with Non-covalent macrocyclic compound TMC435
分子名称: (2R,3aR,10Z,11aS,12aR,14aR)-N-(cyclopropylsulfonyl)-2-({7-methoxy-8-methyl-2-[4-(1-methylethyl)-1,3-thiazol-2-yl]quinolin-4-yl}oxy)-5-methyl-4,14-dioxo-2,3,3a,4,5,6,7,8,9,11a,12,13,14,14a-tetradecahydrocyclopenta[c]cyclopropa[g][1,6]diazacyclotetradecine-12a(1H)-carboxamide, 19-mer peptide from Genome polyprotein, GLYCEROL, ...
著者Lindberg, J.D, Nystrom, S, Cummings, M.D.
登録日2009-10-26
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Induced-Fit Binding of the Macrocyclic Noncovalent Inhibitor TMC435 to its HCV NS3/NS4A Protease Target
Angew.Chem.Int.Ed.Engl., 49, 2010
2TS1
DownloadVisualize
BU of 2ts1 by Molmil
STRUCTURE OF TYROSYL-T/RNA SYNTHETASE REFINED AT 2.3 ANGSTROMS RESOLUTION. INTERACTION OF THE ENZYME WITH THE TYROSYL ADENYLATE INTERMEDIATE
分子名称: TYROSYL-TRNA SYNTHETASE
著者Brick, P, Bhat, T.N, Blow, D.M.
登録日1989-06-29
公開日1989-10-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of tyrosyl-tRNA synthetase refined at 2.3 A resolution. Interaction of the enzyme with the tyrosyl adenylate intermediate.
J.Mol.Biol., 208, 1989
1J7L
DownloadVisualize
BU of 1j7l by Molmil
Crystal Structure of 3',5"-Aminoglycoside Phosphotransferase Type IIIa ADP Complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE, MAGNESIUM ION
著者Burk, D.L, Hon, W.C, Leung, A.K.-W, Berghuis, A.M.
登録日2001-05-17
公開日2001-08-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase.
Biochemistry, 40, 2001
3NSG
DownloadVisualize
BU of 3nsg by Molmil
Crystal Structure of OmpF, an Outer Membrane Protein from Salmonella typhi
分子名称: CITRATE ANION, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Balasubramaniam, D, Arockiasamy, A, Sharma, A, Krishnaswamy, S.
登録日2010-07-01
公開日2011-07-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Asymmetric pore occupancy in crystal structure of OmpF porin from Salmonella typhi
J.Struct.Biol., 178, 2012
4M3I
DownloadVisualize
BU of 4m3i by Molmil
X-ray crystal structure of the ruthenium complex [Ru(TAP)2(dppz-{Me2})]2+ bound to d(CCGGTACCGG)
分子名称: (11,12-dimethyldipyrido[3,2-a:2',3'-c]phenazine-kappa~2~N~4~,N~5~)[bis(pyrazino[2,3-f]quinoxaline-kappa~2~N~1~,N~10~)]ruthenium(2+), BARIUM ION, Synthetic DNA CCGGTACCGG
著者Niyazi, H, Teixeira, S, Mitchell, E, Forsyth, T, Cardin, C.
登録日2013-08-06
公開日2014-09-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray crystal structure of the ruthenium complex [Ru(TAP)2(dppz-{Me2})]2+ bound to d(CCGGTACCGG)
To be Published
1SMC
DownloadVisualize
BU of 1smc by Molmil
Mycobacterium tuberculosis dUTPase complexed with dUTP in the absence of metal ion.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYURIDINE-5'-TRIPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ...
著者Sawaya, M.R, Chan, S, Segelke, B, Lekin, T, Krupka, H, Cho, U.S, Kim, M.-Y, So, M, Kim, C.-Y, Naranjo, C.M, Rogers, Y.C, Park, M.S, Waldo, G.S, Pashkov, I, Cascio, D, Yeates, T.O, Perry, J.L, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
登録日2004-03-09
公開日2004-03-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.
J.Mol.Biol., 341, 2004
7EQ2
DownloadVisualize
BU of 7eq2 by Molmil
Crystal structure of GDP-bound Rab1a-T75D
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CACODYLATE ION, COBALT HEXAMMINE(III), ...
著者Cao, Y.L, Gu, D.D, Gao, S.
登録日2021-04-28
公開日2022-11-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55090284 Å)
主引用文献Aurora kinase A-mediated phosphorylation triggers structural alteration of Rab1A to enhance ER complexity during mitosis
Nat.Struct.Mol.Biol., 2024
7JOR
DownloadVisualize
BU of 7jor by Molmil
Neutron structure of ferric Dehaloperoxidase B
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE
著者Carey, L.M, Ghiladi, R.A, Meilleur, F, Myles, D.A.A.
登録日2020-08-07
公開日2021-09-08
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (2.05 Å)
主引用文献Complementarity of neutron, XFEL and synchrotron crystallography for defining the structures of metalloenzymes at room temperature.
Iucrj, 9, 2022
1SQX
DownloadVisualize
BU of 1sqx by Molmil
Crystal Structure Analysis of Bovine Bc1 with Stigmatellin A
分子名称: Cytochrome b, Cytochrome c1, heme protein, ...
著者Esser, L, Quinn, B, Li, Y.F, Zhang, M, Elberry, M, Yu, L, Yu, C.A, Xia, D.
登録日2004-03-21
公開日2005-09-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystallographic studies of quinol oxidation site inhibitors: a modified classification of inhibitors for the cytochrome bc(1) complex.
J.Mol.Biol., 341, 2004
5TNN
DownloadVisualize
BU of 5tnn by Molmil
Crystal structure of the E153Q mutant of the CFTR inhibitory factor Cif containing the adducted (S)-1,2-Epoxyoctane hydrolysis intermediate
分子名称: (2R)-octane-1,2-diol, CFTR inhibitory factor
著者Hvorecny, K.L, Madden, D.R.
登録日2016-10-14
公開日2017-10-11
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Active-Site Flexibility and Substrate Specificity in a Bacterial Virulence Factor: Crystallographic Snapshots of an Epoxide Hydrolase.
Structure, 25, 2017
3NW9
DownloadVisualize
BU of 3nw9 by Molmil
Rat COMT in complex with a methylpurin-containing bisubstrate inhibitor
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CHLORIDE ION, Catechol O-methyltransferase, ...
著者Ehler, A, Schlatter, D, Stihle, M, Benz, J, Rudolph, M.G.
登録日2010-07-09
公開日2011-03-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Molecular Recognition at the Active Site of Catechol-O-methyltransferase (COMT): Adenine Replacements in Bisubstrate Inhibitors
Chemistry, 17, 2011
3ZRH
DownloadVisualize
BU of 3zrh by Molmil
Crystal structure of the Lys29, Lys33-linkage-specific TRABID OTU deubiquitinase domain reveals an Ankyrin-repeat ubiquitin binding domain (AnkUBD)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, UBIQUITIN THIOESTERASE ZRANB1
著者Licchesi, J.D.F, Akutsu, M, Komander, D.
登録日2011-06-16
公開日2011-12-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献An Ankyrin-Repeat Ubiquitin-Binding Domain Determines Trabid'S Specificity for Atypical Ubiquitin Chains.
Nat.Struct.Mol.Biol., 19, 2011
6D81
DownloadVisualize
BU of 6d81 by Molmil
Structure of the Bovine p85a BH domain
分子名称: Phosphatidylinositol 3-kinase regulatory subunit alpha, SULFATE ION
著者Moore, S.A, Marshall, J.D, Anderson, D.H.
登録日2018-04-25
公開日2018-05-23
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.248 Å)
主引用文献Patient-derived mutations within the N-terminal domains of p85 alpha impact PTEN or Rab5 binding and regulation.
Sci Rep, 8, 2018
3OC2
DownloadVisualize
BU of 3oc2 by Molmil
Crystal structure of penicillin-binding protein 3 from Pseudomonas aeruginosa
分子名称: CHLORIDE ION, Penicillin-binding protein 3
著者Sainsbury, S, Bird, L, Stuart, D.I, Owens, R.J, Ren, J, Oxford Protein Production Facility (OPPF)
登録日2010-08-09
公開日2010-11-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.968 Å)
主引用文献Crystal structures of penicillin-binding protein 3 from Pseudomonas aeruginosa: comparison of native and antibiotic-bound forms
J.Mol.Biol., 405, 2011
4M5V
DownloadVisualize
BU of 4m5v by Molmil
Influenza 2009 H1N1 endonuclease with 100 millimolar calcium
分子名称: CALCIUM ION, Polymerase PA, SULFATE ION
著者Bauman, J.D, Patel, D, Das, K, Arnold, E.
登録日2013-08-08
公開日2013-09-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic fragment screening and structure-based optimization yields a new class of influenza endonuclease inhibitors.
Acs Chem.Biol., 8, 2013
4EST
DownloadVisualize
BU of 4est by Molmil
CRYSTAL STRUCTURE OF THE COVALENT COMPLEX FORMED BY A PEPTIDYL ALPHA,ALPHA-DIFLUORO-BETA-KETO AMIDE WITH PORCINE PANCREATIC ELASTASE AT 1.78-ANGSTROMS RESOLUTION
分子名称: CALCIUM ION, ELASTASE, INHIBITOR ACE-ALA-PRO-VAI-DIFLUORO-N-PHENYLETHYLACETAMIDE, ...
著者Takahashi, L.H, Radhakrishnan, R, Rosenfieldjunior, R.E, Meyerjunior, E.F, Trainor, D.A.
登録日1989-05-15
公開日1992-04-15
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal Structure of the Covalent Complex Formed by a Peptidyl Alpha,Alpha-Difluoro-Beta-Keto Amide with Porcine Pancreatic Elastase at 1.78-Angstroms Resolution
J.Am.Chem.Soc., 111, 1989

236963

件を2025-06-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon