Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7HOP
DownloadVisualize
BU of 7hop by Molmil
PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0014657-001
分子名称: 5-cyclopropyl-1,2-dimethyl-N-(3-methylpyridin-4-yl)-1H-pyrrole-3-carboxamide, DIMETHYL SULFOXIDE, SULFATE ION, ...
著者Ni, X, Marples, P.G, Godoy, A.S, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Fairhead, M, Lithgo, R.M, Lee, A, Kenton, N, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Williams, E.P, Chandran, A.V, Walsh, M.A, Fearon, D, von Delft, F.
登録日2024-11-07
公開日2025-02-26
最終更新日2025-05-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献PanDDA analysis group deposition
To Be Published
7HOT
DownloadVisualize
BU of 7hot by Molmil
PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0014668-001
分子名称: DIMETHYL SULFOXIDE, N-(3-methylpyridin-4-yl)-3-(1,3-thiazol-2-yl)benzamide, SULFATE ION, ...
著者Ni, X, Marples, P.G, Godoy, A.S, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Fairhead, M, Lithgo, R.M, Lee, A, Kenton, N, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Williams, E.P, Chandran, A.V, Walsh, M.A, Fearon, D, von Delft, F.
登録日2024-11-07
公開日2025-02-26
最終更新日2025-05-28
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献PanDDA analysis group deposition
To Be Published
8C27
DownloadVisualize
BU of 8c27 by Molmil
Domain 3 of Group B Streptococcus pilus protein as scaffold for the display of foreign epitopes
分子名称: 1,2-ETHANEDIOL, PI-2a backbone protein
著者Veggi, D, Cappelli, L, Cozzi, R.
登録日2022-12-21
公開日2024-01-10
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Computational structure-based approach to study chimeric antigens using a new protein scaffold displaying foreign epitopes.
Faseb J., 38, 2024
7HUH
DownloadVisualize
BU of 7huh by Molmil
Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with ASAP-0031591-001 (A71EV2A-x3175)
分子名称: 1-methyl-N-[(3-methyl-1,2-oxazol-5-yl)methyl]-1H-indole-3-carboxamide, DIMETHYL SULFOXIDE, Protease 2A, ...
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Balcomb, B.H, Capkin, E, Chandran, A.V, Golding, M, Godoy, A.S, Aschenbrenner, J.C, Marples, P.G, Ni, X, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Xavier, M.-A.E, Kenton, N, Tucker, J, DiPoto, M, Lee, A, Fearon, D, von Delft, F.
登録日2025-01-10
公開日2025-02-26
実験手法X-RAY DIFFRACTION (1.516 Å)
主引用文献Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre
To Be Published
7HUZ
DownloadVisualize
BU of 7huz by Molmil
Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with ASAP-0032050-001 (A71EV2A-x3264)
分子名称: 1-methyl-N-[2-(1,3-oxazol-4-yl)ethyl]-1H-pyrazolo[3,4-b]pyridine-3-carboxamide, DIMETHYL SULFOXIDE, Protease 2A, ...
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Balcomb, B.H, Capkin, E, Chandran, A.V, Golding, M, Godoy, A.S, Aschenbrenner, J.C, Marples, P.G, Ni, X, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Xavier, M.-A.E, Kenton, N, Tucker, J, DiPoto, M, Lee, A, Fearon, D, von Delft, F.
登録日2025-01-10
公開日2025-02-26
実験手法X-RAY DIFFRACTION (1.442 Å)
主引用文献Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre
To Be Published
7HPE
DownloadVisualize
BU of 7hpe by Molmil
PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0015259-001
分子名称: DIMETHYL SULFOXIDE, N-(1-methyl-1H-pyrazol-4-yl)-2-[(propan-2-yl)amino]-1H-1,3-benzimidazole-6-carboxamide, Serine protease NS3, ...
著者Ni, X, Marples, P.G, Godoy, A.S, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Fairhead, M, Lithgo, R.M, Lee, A, Kenton, N, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Williams, E.P, Chandran, A.V, Walsh, M.A, Fearon, D, von Delft, F.
登録日2024-11-07
公開日2025-02-26
最終更新日2025-05-28
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献PanDDA analysis group deposition
To Be Published
6KNL
DownloadVisualize
BU of 6knl by Molmil
Uridine and triphosphate-bound UGPase from acinetobacter baumannii
分子名称: 1,2-ETHANEDIOL, SULFATE ION, TRIPHOSPHATE, ...
著者Lee, J.H, Kang, L.W.
登録日2019-08-05
公開日2020-08-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Uridine and triphosphate-bound UGPase from acinetobacter baumannii
To be published
7HPB
DownloadVisualize
BU of 7hpb by Molmil
PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0015080-001
分子名称: DIMETHYL SULFOXIDE, N-{3-chloro-5-[(1-hydroxy-2-methylpropan-2-yl)carbamoyl]phenyl}-2-methyl-3-oxo-2,3-dihydro-1,2-oxazole-5-carboxamide, Serine protease NS3, ...
著者Ni, X, Marples, P.G, Godoy, A.S, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Fairhead, M, Lithgo, R.M, Lee, A, Kenton, N, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Williams, E.P, Chandran, A.V, Walsh, M.A, Fearon, D, von Delft, F.
登録日2024-11-07
公開日2025-02-26
最終更新日2025-05-28
実験手法X-RAY DIFFRACTION (2.156 Å)
主引用文献PanDDA analysis group deposition
To Be Published
7HV6
DownloadVisualize
BU of 7hv6 by Molmil
Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with ASAP-0032204-001 (A71EV2A-x3410)
分子名称: 1,3-dimethyl-N-[2-(1,3-oxazol-4-yl)ethyl]-1H-indazole-6-carboxamide, DIMETHYL SULFOXIDE, Protease 2A, ...
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Balcomb, B.H, Capkin, E, Chandran, A.V, Golding, M, Godoy, A.S, Aschenbrenner, J.C, Marples, P.G, Ni, X, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Xavier, M.-A.E, Kenton, N, Tucker, J, DiPoto, M, Lee, A, Fearon, D, von Delft, F.
登録日2025-01-10
公開日2025-02-26
実験手法X-RAY DIFFRACTION (1.368 Å)
主引用文献Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre
To Be Published
3LXN
DownloadVisualize
BU of 3lxn by Molmil
Structural and Thermodynamic Characterization of the TYK2 and JAK3 Kinase Domains in Complex with CP-690550 and CMP-6
分子名称: 3-{(3R,4R)-4-methyl-3-[methyl(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]piperidin-1-yl}-3-oxopropanenitrile, Non-receptor tyrosine-protein kinase TYK2
著者Chrencik, J.E, Benson, T.E.
登録日2010-02-25
公開日2010-06-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and thermodynamic characterization of the TYK2 and JAK3 kinase domains in complex with CP-690550 and CMP-6.
J.Mol.Biol., 400, 2010
2X3X
DownloadVisualize
BU of 2x3x by Molmil
structure of mouse syndapin I (crystal form 1)
分子名称: PROTEIN KINASE C AND CASEIN KINASE SUBSTRATE IN NEURONS PROTEIN 1
著者Ma, Q, Rao, Y, Vahedi-Faridi, A, Saenger, W, Haucke, V.
登録日2010-01-28
公開日2010-04-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Molecular Basis for SH3 Domain Regulation of F-Bar-Mediated Membrane Deformation.
Proc.Natl.Acad.Sci.USA, 107, 2010
4LV8
DownloadVisualize
BU of 4lv8 by Molmil
Murine IRGa6 bound to Toxoplasma ROP5C, a pseudokinase GDI
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, ...
著者Reese, M.L, Boothroyd, J.C.
登録日2013-07-26
公開日2013-09-25
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Murine IRGa6 bound to Toxoplasma ROP5C, a pseudokinase GDI
To be Published
3I73
DownloadVisualize
BU of 3i73 by Molmil
Structural characterization for the nucleotide binding ability of subunit A with ADP of the A1AO ATP synthase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, A-TYPE ATP SYNTHASE CATALYTIC SUBUNIT A, ...
著者Manimekalai, S.M.S, Kumar, A, Balakrishna, A.M, Gruber, G.
登録日2009-07-08
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Nucleotide binding states of subunit A of the A-ATP synthase and the implication of P-loop switch in evolution.
J.Mol.Biol., 396, 2010
4QKM
DownloadVisualize
BU of 4qkm by Molmil
Influenza A M2 wild type TM domain at low pH in the lipidic cubic phase under room temperature diffraction conditions
分子名称: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1,2-ETHANEDIOL, CALCIUM ION, ...
著者Thomaston, J.L, DeGrado, W.F.
登録日2014-06-06
公開日2015-11-11
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献High-resolution structures of the M2 channel from influenza A virus reveal dynamic pathways for proton stabilization and transduction.
Proc.Natl.Acad.Sci.USA, 112, 2015
4LWW
DownloadVisualize
BU of 4lww by Molmil
Discovery of Potent and Efficacious Cyanoguanidine-containing Nicotinamide Phosphoribosyltransferase (Nampt) Inhibitors
分子名称: 1,2-ETHANEDIOL, N-(4-(phenylsulfonyl)benzyl)-1H-pyrrolo[3,2-c]pyridine-2-carboxamide, Nicotinamide phosphoribosyltransferase, ...
著者Zheng, X, Baumeister, T, Buckmelter, A.J, Caligiuri, M, Clodfelter, K.H, Han, B, Ho, Y, Kley, N, Lin, J, Reynoids, D.J, Sharma, G, Smith, C.C, Wang, Z, Dragovich, P.S, Oh, A, Wang, W, Zak, M, Wang, L, Yuen, P, Bair, K.W.
登録日2013-07-28
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.641 Å)
主引用文献Discovery of potent and efficacious cyanoguanidine-containing nicotinamide phosphoribosyltransferase (Nampt) inhibitors.
Bioorg.Med.Chem.Lett., 24, 2014
7HPG
DownloadVisualize
BU of 7hpg by Molmil
PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0015487-001
分子名称: DIMETHYL SULFOXIDE, N-(3-methylpyridin-4-yl)-2-oxo-1-{[(3R)-pyrrolidin-3-yl]methyl}-1,2-dihydropyridine-3-carboxamide, SULFATE ION, ...
著者Ni, X, Marples, P.G, Godoy, A.S, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Fairhead, M, Lithgo, R.M, Lee, A, Kenton, N, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Williams, E.P, Chandran, A.V, Walsh, M.A, Fearon, D, von Delft, F.
登録日2024-11-07
公開日2025-02-26
最終更新日2025-05-28
実験手法X-RAY DIFFRACTION (1.664 Å)
主引用文献PanDDA analysis group deposition
To Be Published
7HPH
DownloadVisualize
BU of 7hph by Molmil
PanDDA analysis group deposition -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0015442-001
分子名称: 4-methoxy-2-(piperazin-1-yl)-6-{[2-(piperazin-1-yl)pyridin-4-yl]methyl}pyrimidine, DIMETHYL SULFOXIDE, Serine protease NS3, ...
著者Ni, X, Marples, P.G, Godoy, A.S, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Fairhead, M, Lithgo, R.M, Lee, A, Kenton, N, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Williams, E.P, Chandran, A.V, Walsh, M.A, Fearon, D, von Delft, F.
登録日2024-11-07
公開日2025-02-26
最終更新日2025-05-28
実験手法X-RAY DIFFRACTION (2.337 Å)
主引用文献PanDDA analysis group deposition
To Be Published
5MQF
DownloadVisualize
BU of 5mqf by Molmil
Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ATP-dependent RNA helicase DHX8, Cell division cycle 5-like protein, ...
著者Bertram, K, Hartmuth, K, Kastner, B.
登録日2016-12-20
公開日2017-03-22
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Cryo-EM structure of a human spliceosome activated for step 2 of splicing.
Nature, 542, 2017
3AF9
DownloadVisualize
BU of 3af9 by Molmil
Crystal Structure of Pd(allyl)/apo-C48AFr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
著者Abe, S, Hikage, T, Watanabe, Y, Kitagawa, S, Ueno, T.
登録日2010-02-24
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism of Accumulation and Incorporation of Organometallic Pd Complexes into the Protein Nanocage of apo-Ferritin.
Inorg.Chem., 49, 2010
7HV3
DownloadVisualize
BU of 7hv3 by Molmil
Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with ASAP-0032003-001 (A71EV2A-x3306)
分子名称: 1-methyl-N-[2-(1,3-thiazol-4-yl)ethyl]-1H-indazole-3-carboxamide, DIMETHYL SULFOXIDE, Protease 2A, ...
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Balcomb, B.H, Capkin, E, Chandran, A.V, Golding, M, Godoy, A.S, Aschenbrenner, J.C, Marples, P.G, Ni, X, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Xavier, M.-A.E, Kenton, N, Tucker, J, DiPoto, M, Lee, A, Fearon, D, von Delft, F.
登録日2025-01-10
公開日2025-02-26
実験手法X-RAY DIFFRACTION (1.907 Å)
主引用文献Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre
To Be Published
5D2M
DownloadVisualize
BU of 5d2m by Molmil
Complex between human SUMO2-RANGAP1, UBC9 and ZNF451
分子名称: 1,2-ETHANEDIOL, Ran GTPase-activating protein 1, SUMO-conjugating enzyme UBC9, ...
著者Cappadocia, L, Lima, C.D.
登録日2015-08-05
公開日2015-11-04
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for catalytic activation by the human ZNF451 SUMO E3 ligase.
Nat.Struct.Mol.Biol., 22, 2015
3QCR
DownloadVisualize
BU of 3qcr by Molmil
Incomplete structural model of a human telomeric DNA quadruplex-acridine complex.
分子名称: Human telomeric repeat deoxyribonucleic acid, N,N'-[acridine-3,6-diylbis(1H-1,2,3-triazole-1,4-diylbenzene-3,1-diyl)]bis[3-(diethylamino)propanamide], POTASSIUM ION
著者Collie, G.W, Neidle, S, Parkinson, G.N.
登録日2011-01-17
公開日2011-02-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of telomeric RNA quadruplex-acridine ligand recognition.
J.Am.Chem.Soc., 133, 2011
4Q4P
DownloadVisualize
BU of 4q4p by Molmil
tRNA-Guanine Transglycosylase (TGT) in Complex with 2-{[2-(PIPERIDIN-1-YL)ETHYL]AMINO}-3,5-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE
分子名称: 2-{[2-(piperidin-1-yl)ethyl]amino}-3,5-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Neeb, M, Heine, A, Klebe, G.
登録日2014-04-15
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.539 Å)
主引用文献Beyond Affinity: Enthalpy-Entropy Factorization Unravels Complexity of a Flat Structure-Activity Relationship for Inhibition of a tRNA-Modifying Enzyme.
J.Med.Chem., 57, 2014
8W3L
DownloadVisualize
BU of 8w3l by Molmil
Crystal structure of prefusion-stabilized RSV F protein UFCR2-iSS-P2-NQ
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, prefusion-stabilized RSV F protein UFCR2-iSS-P2-NQ
著者Lee, Y.Z, Stanfield, R.L, Wilson, I.A, Zhu, J.
登録日2024-02-22
公開日2025-01-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Rational design of uncleaved prefusion-closed trimer vaccines for human respiratory syncytial virus and metapneumovirus.
Nat Commun, 15, 2024
4FEQ
DownloadVisualize
BU of 4feq by Molmil
Inhibitor bound structure of the kinase domain of the murine receptor tyrosine kinase TYRO3 (Sky)
分子名称: 4-(cyclopentylamino)-N-[3-(2-oxopyrrolidin-1-yl)propyl]-2-{[2-(pyridin-4-yl)ethyl]amino}pyrimidine-5-carboxamide, Tyrosine-protein kinase receptor TYRO3
著者Ohren, J.F, Powell, N.A, Kohrt, J.T, Perrin, L.A.
登録日2012-05-30
公開日2013-03-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Highly selective 2,4-diaminopyrimidine-5-carboxamide inhibitors of Sky kinase.
Bioorg.Med.Chem.Lett., 23, 2013

245663

件を2025-12-03に公開中

PDB statisticsPDBj update infoContact PDBjnumon